FFCP PHASE1:Hg19::chr1:120049809..120049823,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=3283 | |EntrezGene=entrezgene:3283 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=5217 | |HGNC=HGNC:5217 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=E9PRN7 | |UniProt=uniprot:E9PRN7 | ||
|association_with_transcript=0bp_to_ENST00000531340_5end | |association_with_transcript=0bp_to_ENST00000531340_5end | ||
|cluster_id=chr1:120049809..120049823,+ | |||
|coexpression_cluster_id=C50 | |coexpression_cluster_id=C50 | ||
|description=CAGE_peak_2_at_HSD3B1_5end | |description=CAGE_peak_2_at_HSD3B1_5end |
Revision as of 20:19, 27 July 2015
Short description: | p2@HSD3B1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HSD3B1_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000531340_5end |
EntrezGene: | 3283 |
HGNC: | 5217 |
UniProt: | E9PRN7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@HSD3B1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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chorionic membrane mesenchymal stem cell | 1.29e-36 | 3 |
intestinal epithelial cell | 1.75e-12 | 4 |
extraembryonic cell | 2.53e-10 | 19 |
germ line cell | 1.21e-07 | 7 |
germ cell | 1.21e-07 | 7 |
epithelial cell of large intestine | 4.42e-07 | 2 |
Showing 1 to 6 of 6 entries
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.29e-36 | 3 |
chorion | 8.55e-28 | 7 |
extraembryonic membrane | 2.46e-21 | 14 |
membranous layer | 2.46e-21 | 14 |
rectum | 1.56e-12 | 4 |
intestinal mucosa | 1.75e-12 | 4 |
wall of intestine | 1.75e-12 | 4 |
gastrointestinal system mucosa | 1.75e-12 | 4 |
gastrointestinal system epithelium | 1.75e-12 | 4 |
intestinal epithelium | 1.75e-12 | 4 |
Showing 1 to 10 of 13 entries
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 9.73e-13 | 1 |
endocrine pancreas cancer | 9.73e-13 | 1 |
pancreatic endocrine carcinoma | 9.73e-13 | 1 |
Showing 1 to 3 of 3 entries