FFCP PHASE1:Hg19::chr2:108994565..108994623,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=27233 | |EntrezGene=entrezgene:27233 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=11457 | |HGNC=HGNC:11457 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q08AS5 | |UniProt=uniprot:Q08AS5 | ||
|association_with_transcript=-17bp_to_ENST00000409309_5end | |association_with_transcript=-17bp_to_ENST00000409309_5end | ||
|cluster_id=chr2:108994565..108994623,+ | |||
|coexpression_cluster_id=C2656 | |coexpression_cluster_id=C2656 | ||
|description=CAGE_peak_2_at_SULT1C4_5end | |description=CAGE_peak_2_at_SULT1C4_5end |
Revision as of 23:05, 28 July 2015
Short description: | p2@SULT1C4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SULT1C4_5end |
Coexpression cluster: | C2656_Renal_lung_Lymphatic_kidney_medulla_Endothelial_uterus |
Association with transcript: | -17bp_to_ENST00000409309_5end |
EntrezGene: | 27233 |
HGNC: | 11457 |
UniProt: | Q08AS5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@SULT1C4 |
---|
0
5
10
15
20
25
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 4.84e-12 | 10 |
nephron tubule epithelial cell | 4.84e-12 | 10 |
kidney cell | 4.96e-11 | 17 |
kidney epithelial cell | 4.96e-11 | 17 |
epithelial cell of nephron | 5.35e-11 | 15 |
lymphangioblast | 6.40e-09 | 6 |
endothelial cell of lymphatic vessel | 6.40e-09 | 6 |
vascular lymphangioblast | 6.40e-09 | 6 |
endothelial cell of vascular tree | 6.42e-09 | 24 |
endothelial cell | 1.27e-07 | 36 |
Showing 1 to 10 of 14 entries
Ontology term | p-value | n |
---|---|---|
neural tube | 3.31e-45 | 56 |
neural rod | 3.31e-45 | 56 |
future spinal cord | 3.31e-45 | 56 |
neural keel | 3.31e-45 | 56 |
regional part of nervous system | 2.02e-41 | 53 |
regional part of brain | 2.02e-41 | 53 |
adult organism | 2.05e-41 | 114 |
central nervous system | 7.65e-41 | 81 |
nervous system | 2.26e-39 | 89 |
brain | 1.46e-36 | 68 |
Showing 1 to 10 of 81 entries