FFCP PHASE1:Hg19::chr4:102711802..102711843,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=55024 | |EntrezGene=entrezgene:55024 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=18233 | |HGNC=HGNC:18233 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q8NDB2 | |UniProt=uniprot:Q8NDB2 | ||
|association_with_transcript=38bp_to_ENST00000322953,ENST00000428908,NM_001127507,NM_017935,uc003hvy.3,uc010ill.2_5end | |association_with_transcript=38bp_to_ENST00000322953,ENST00000428908,NM_001127507,NM_017935,uc003hvy.3,uc010ill.2_5end | ||
|cluster_id=chr4:102711802..102711843,+ | |||
|coexpression_cluster_id=C47 | |coexpression_cluster_id=C47 | ||
|description=CAGE_peak_2_at_BANK1_5end | |description=CAGE_peak_2_at_BANK1_5end |
Revision as of 00:26, 30 July 2015
Short description: | p2@BANK1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BANK1_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 38bp_to_ENST00000322953, ENST00000428908, NM_001127507, NM_017935, uc003hvy.3, uc010ill.2_5end |
EntrezGene: | 55024 |
HGNC: | 18233 |
UniProt: | Q8NDB2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@BANK1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 3.69e-21 | 168 |
hematopoietic cell | 3.57e-20 | 177 |
hematopoietic oligopotent progenitor cell | 3.49e-18 | 161 |
hematopoietic multipotent progenitor cell | 3.49e-18 | 161 |
myeloid cell | 1.23e-15 | 108 |
common myeloid progenitor | 1.23e-15 | 108 |
B cell | 3.74e-15 | 14 |
leukocyte | 9.14e-15 | 136 |
nongranular leukocyte | 4.68e-12 | 115 |
lymphocyte of B lineage | 4.84e-12 | 24 |
Showing 1 to 10 of 22 entries
Ontology term | p-value | n |
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hematopoietic system | 4.16e-15 | 98 |
blood island | 4.16e-15 | 98 |
hemolymphoid system | 5.79e-14 | 108 |
immune system | 1.58e-09 | 93 |
bone marrow | 2.60e-09 | 76 |
bone element | 7.03e-08 | 82 |
connective tissue | 1.72e-07 | 371 |
skeletal element | 8.88e-07 | 90 |
blood | 9.80e-07 | 15 |
haemolymphatic fluid | 9.80e-07 | 15 |
Showing 1 to 10 of 11 entries
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 7.81e-09 | 31 |
hematologic cancer | 1.06e-07 | 51 |
immune system cancer | 1.06e-07 | 51 |
leukemia | 8.55e-07 | 39 |
Showing 1 to 4 of 4 entries