FFCP PHASE1:Hg19::chr5:94620214..94620231,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=79772 | |EntrezGene=entrezgene:79772 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=26183 | |HGNC=HGNC:26183 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q6DN14 | |UniProt=uniprot:Q6DN14 | ||
|association_with_transcript=47bp_to_AY656715_5end | |association_with_transcript=47bp_to_AY656715_5end | ||
|cluster_id=chr5:94620214..94620231,- | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_9_at_MCTP1_5end | |description=CAGE_peak_9_at_MCTP1_5end | ||
Revision as of 17:24, 30 July 2015
| Short description: | p9@MCTP1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_9_at_MCTP1_5end |
| Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
| Association with transcript: | 47bp_to_AY656715_5end |
| EntrezGene: | 79772 |
| HGNC: | 26183 |
| UniProt: | Q6DN14 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p9@MCTP1 |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| peptide hormone secreting cell | 3.58e-08 | 1 |
| enteroendocrine cell | 3.58e-08 | 1 |
| type D enteroendocrine cell | 3.58e-08 | 1 |
| somatostatin secreting cell | 3.58e-08 | 1 |
| pancreatic D cell | 3.58e-08 | 1 |
| progenitor cell of endocrine pancreas | 3.58e-08 | 1 |
Showing 1 to 6 of 6 entries
| Ontology term | p-value | n |
|---|---|---|
| regional part of cerebral cortex | 3.20e-62 | 22 |
| neocortex | 2.51e-59 | 20 |
| cerebral cortex | 1.03e-54 | 25 |
| pallium | 1.03e-54 | 25 |
| cerebral hemisphere | 2.30e-48 | 32 |
| telencephalon | 2.01e-45 | 34 |
| regional part of telencephalon | 1.69e-42 | 32 |
| regional part of nervous system | 3.93e-41 | 53 |
| regional part of brain | 3.93e-41 | 53 |
| brain grey matter | 6.65e-40 | 34 |
Showing 1 to 10 of 56 entries
