FFCP PHASE1:Hg19::chrX:15767971..15768048,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=11238 | |EntrezGene=entrezgene:11238 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=1378 | |HGNC=HGNC:1378 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=C9JA11 | |UniProt=uniprot:C9JA11 | ||
|association_with_transcript=0bp_to_ENST00000380313,ENST00000479740_5end | |association_with_transcript=0bp_to_ENST00000380313,ENST00000479740_5end | ||
|cluster_id=chrX:15767971..15768048,+ | |||
|description=CAGE_peak_2_at_CA5B_5end | |description=CAGE_peak_2_at_CA5B_5end | ||
|id=chrX:15767971..15768048,+ | |id=chrX:15767971..15768048,+ | ||
Revision as of 07:13, 1 August 2015
| Short description: | p2@CA5B |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_CA5B_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000380313, ENST00000479740_5end |
| EntrezGene: | 11238 |
| HGNC: | 1378 |
| UniProt: | C9JA11 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@CA5B |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| multi fate stem cell | 2.82e-12 | 427 |
| stem cell | 2.09e-11 | 441 |
| mesenchymal cell | 2.24e-11 | 354 |
| somatic stem cell | 2.31e-11 | 433 |
| connective tissue cell | 3.43e-11 | 361 |
| motile cell | 5.67e-10 | 386 |
| classical monocyte | 8.04e-10 | 42 |
| CD14-positive, CD16-negative classical monocyte | 8.04e-10 | 42 |
| defensive cell | 5.51e-09 | 48 |
| phagocyte | 5.51e-09 | 48 |
Showing 1 to 10 of 13 entries
| Ontology term | p-value | n |
|---|---|---|
| connective tissue | 2.64e-11 | 371 |
| musculoskeletal system | 6.73e-08 | 167 |
Showing 1 to 2 of 2 entries
