FFCP PHASE1:Mm9::chr3:51028834..51028863,+: Difference between revisions
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{{FFCP|EntrezGene=12457|HGNC=|UniProt=O35710|association_with_transcript=442bp_to_ENSMUST00000167780_5end|description=CAGE_peak_1_at_Ccrn4l_5end|id=chr3:51028834..51028863,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!4.34e-10!34;UBERON:0001049!3.18e-08!52;UBERON:0005068!3.18e-08!52;UBERON:0006241!3.18e-08!52;UBERON:0007135!3.18e-08!52;UBERON:0002791!3.88e-08!29;UBERON:0003528!3.88e-08!29;UBERON:0001893!3.88e-08!29;UBERON:0000955!1.14e-07!50;UBERON:0006238!1.14e-07!50;UBERON:0001017!2.71e-07!73;UBERON:0005743!2.71e-07!73;UBERON:0002616!3.13e-07!49;UBERON:0000073!6.16e-07!75;UBERON:0001016!6.16e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.34e-10,34;UBERON:0000073,5.68e-09,54;UBERON:0001049,3.18e-08,52;UBERON:0005068,3.18e-08,52;UBERON:0006241,3.18e-08,52;UBERON:0007135,3.18e-08,52;UBERON:0003528,3.88e-08,29;UBERON:0002791,3.88e-08,29;UBERON:0001893,3.88e-08,29;UBERON:0001017,2.71e-07,73;UBERON:0001016,6.16e-07,75|phase1_expression=5.2849119544582,50.9504095153467,56.874904923692,49.906594865627,80.1433167914156,16.9558064631009,12.3814699515629,12.0084690800666,55.75233397206,47.2810343170427,25.6826952338257,35.0199777989527,9.75844160607873,7.51815460803378,37.3082933233542,45.9618856974905,73.4539972034554,1.41957974411207,1.91960207048034,5.09267582157636,12.161190491603,5.56029326724958,9.14199261986274,8.79958325363737,10.782236210157,38.4735415957064,28.861053742658,26.2874903876785,10.2612646506442,11.089325709437,11.0865255327652,20.3209815507082,17.221814052368,0,4.91047753577167,6.98185510505668,6.73758875665818,28.0416192593728,17.9707129240474,20.9409497589519,30.5880373776127,29.3709558532132,27.6740901227758,6.04304726282771,6.69087746048796,9.17733760808408,4.69434806608824,7.84890562969608,8.78744730937887,10.1103547518627,5.03951117851305,10.062679505548,3.85899993932794,21.7608642603403,14.1159395639835,5.40244815675489,0.286533439938757,2.57836046138721,17.8038485556446,17.4567023159771,25.9870875437533,4.74382344896785,2.66788438833342,2.6996991518442,4.94433181283487,2.1314403448383,11.085204089181,11.9107674649682,10.9910989046986,8.77538599155989,12.6194976810829,17.424710048632,19.6573001446936,12.2490799214954,8.53024692062304,14.7075005857603,38.540558349786,18.8977260366078,19.5080297235429,22.9482140650537,15.4614117688072,18.2319679694866,16.1926139420801,16.3201156909187,22.7669389187447,31.8198872311561,22.7794689278565,22.1815340532108,10.2230360999798,5.97015324843606,5.50742528533188,6.0229671388697,13.599426674155,4.31762553310254,11.695975514058,14.3368603871147,13.0613310722529,2.55645483867087,1.55871602761721,1.41335829804136,6.4787973097273,1.28326477414318,2.54805239706646,7.11066703153331,9.09262372247099,12.6679932737549,13.1436355703844,15.300639882354,8.02707439306232,6.67989625791711,9.36820764537134,6.39377504455497,5.30415643688935,3.91878865436819,2.70454026412121,8.67099480174761,5.19109432242185,13.7369389073916,15.9229899350977,11.1619126463712,21.6424688091186,18.4252596191384,3.72783522436244,16.3957246326466,15.7085030110091,16.3492515333498,12.8202183221335,16.7972764678154,13.2153036155987,22.4685959107234,29.2800385803921,26.1361052394758,30.2454317134561,25.8272611903634,24.3112012134685,21.5780879880118,4.07357455401265,8.58408097209642,6.31806896084187,9.6803253707778,6.76626303406059,6.66716102857071,8.82304436046211,6.63101198477146,5.51095643125756,6.53379973452734,7.02762934197966,11.6416516832557,7.11374376678379,10.0226222488944,6.51019159406611,9.86380795924087,7.50727572909114,4.87553033131033,5.35033554660653,4.17971960318836,11.2354109970118,14.6688307055388,12.2190304740105,11.1847917169171,6.56672967947069,6.84235833551856,8.75955521665278,7.87056926989615,7.71335564436891,11.1616293480196,9.38956904898667,14.5956677958962,14.6458266422998,15.1034066952768,21.7264409582893,23.9767979377545,18.2226595691572,13.2864354572768,27.7582732104648,19.6547809644433,32.0506219494284,5.28901133327089,4.90562976231038,8.59275685883622,7.47431275668141,6.85723983719365,6.22658522765637,8.3699275489526,13.2868137232463,8.07024878147653,5.52937459360593,4.17808591286417,5.45899443933536,8.98819408654222,9.72621224436124,10.9527700289902,4.93136542478012,6.51216521875454,1.1270773567308,5.7022371796688,3.10323979468201,5.11991485199326,3.73095569033118,4.57591458736767,3.29697328466887,3.70191491765402,16.8977997439675,37.7069938918373,34.2012651496973,34.8536274196523,39.1520034279811,27.7353733715279,29.2819729548633,22.4402987211632,10.2145192868272,16.1991233780968,8.62609239164127,3.72140947668503,5.92871578917665,5.30415643688935,5.56131981917928,3.85954817090694,3.8798169934987,5.11626811780309,7.00749398700711,5.26209765903083,4.92849521405854,4.02015017860358,3.80869825417622,9.36641509717434,3.31033802623001,4.87222317227305,4.46473352240964,5.24362607090362,4.14443956478149,4.19482269886384,3.0158256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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12457 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O35710 | |||
|association_with_transcript=442bp_to_ENSMUST00000167780_5end | |||
|cluster_id=chr3:51028834..51028863,+ | |||
|description=CAGE_peak_1_at_Ccrn4l_5end | |||
|id=chr3:51028834..51028863,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!4.34e-10!34;UBERON:0001049!3.18e-08!52;UBERON:0005068!3.18e-08!52;UBERON:0006241!3.18e-08!52;UBERON:0007135!3.18e-08!52;UBERON:0002791!3.88e-08!29;UBERON:0003528!3.88e-08!29;UBERON:0001893!3.88e-08!29;UBERON:0000955!1.14e-07!50;UBERON:0006238!1.14e-07!50;UBERON:0001017!2.71e-07!73;UBERON:0005743!2.71e-07!73;UBERON:0002616!3.13e-07!49;UBERON:0000073!6.16e-07!75;UBERON:0001016!6.16e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.34e-10,34;UBERON:0000073,5.68e-09,54;UBERON:0001049,3.18e-08,52;UBERON:0005068,3.18e-08,52;UBERON:0006241,3.18e-08,52;UBERON:0007135,3.18e-08,52;UBERON:0003528,3.88e-08,29;UBERON:0002791,3.88e-08,29;UBERON:0001893,3.88e-08,29;UBERON:0001017,2.71e-07,73;UBERON:0001016,6.16e-07,75 | |||
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| |||
|short_description=p1@Ccrn4l | |||
}} |
Revision as of 20:01, 3 August 2015
Short description: | p1@Ccrn4l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ccrn4l_5end |
Coexpression cluster: | NA |
Association with transcript: | 442bp_to_ENSMUST00000167780_5end |
EntrezGene: | 12457 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gray matter | 4.34e-10 | 34 |
regional part of nervous system | 5.68e-09 | 54 |
neural tube | 3.18e-08 | 52 |
neural rod | 3.18e-08 | 52 |
future spinal cord | 3.18e-08 | 52 |
neural keel | 3.18e-08 | 52 |
brain grey matter | 3.88e-08 | 29 |
regional part of telencephalon | 3.88e-08 | 29 |
telencephalon | 3.88e-08 | 29 |
central nervous system | 2.71e-07 | 73 |
nervous system | 6.16e-07 | 75 |