FFCP PHASE1:Mm9::chr5:139960374..139960427,-: Difference between revisions
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{{FFCP|EntrezGene=100494|HGNC=|MCL_coexpression_id=799|UniProt=D3YUL0|association_with_transcript=0bp_to_ENSMUST00000143889,ENSMUST00000150992_5end|description=CAGE_peak_1_at_Zfand2a_5end|id=chr5:139960374..139960427,-|ontology_enrichment_celltype=CL:0000117!2.97e-09!23;CL:0000337!2.97e-09!23;CL:0000055!6.34e-09!50;CL:0000393!2.87e-08!39;CL:0000211!2.87e-08!39;CL:0002319!7.92e-08!43;CL:0000221!1.88e-07!44;CL:0000133!1.88e-07!44;CL:0000540!7.05e-07!33;CL:0000047!7.05e-07!33;CL:0000031!7.05e-07!33;CL:0000404!7.05e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,2.97e-09,23;CL:0000337,2.97e-09,23;CL:0000393,2.87e-08,39;CL:0000211,2.87e-08,39;CL:0002319,7.92e-08,43;CL:0000221,1.88e-07,44;CL:0000133,1.88e-07,44;CL:0000540,7.05e-07,33;CL:0000047,7.05e-07,33;CL:0000031,7.05e-07,33;CL:0000404,7.05e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.57e-20!75;UBERON:0001016!2.57e-20!75;UBERON:0001049!1.34e-19!52;UBERON:0005068!1.34e-19!52;UBERON:0006241!1.34e-19!52;UBERON:0007135!1.34e-19!52;UBERON:0001017!2.38e-19!73;UBERON:0005743!2.38e-19!73;UBERON:0000955!9.01e-19!50;UBERON:0006238!9.01e-19!50;UBERON:0004121!1.82e-18!102;UBERON:0000924!1.82e-18!102;UBERON:0006601!1.82e-18!102;UBERON:0002616!3.57e-18!49;UBERON:0000033!6.24e-17!63;UBERON:0002020!8.77e-17!34;UBERON:0002346!2.70e-16!71;UBERON:0003075!2.70e-16!71;UBERON:0007284!2.70e-16!71;UBERON:0002791!1.49e-14!29;UBERON:0003528!1.49e-14!29;UBERON:0001893!1.49e-14!29;UBERON:0004111!1.62e-14!122;UBERON:0003080!2.76e-14!40;UBERON:0002780!1.08e-13!39;UBERON:0001890!1.08e-13!39;UBERON:0006240!1.08e-13!39;UBERON:0000025!1.93e-13!114;UBERON:0003056!5.02e-13!49;UBERON:0000956!4.35e-11!21;UBERON:0001869!4.35e-11!21;UBERON:0000203!4.35e-11!21;UBERON:0002619!6.25e-10!17;UBERON:0000153!5.16e-08!94;UBERON:0002021!8.61e-08!10;UBERON:0000411!8.61e-08!10;UBERON:0001950!8.61e-08!10;UBERON:0007023!1.85e-07!51;UBERON:0007811!2.88e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.47e-20,54;UBERON:0001016,2.57e-20,75;UBERON:0004121,1.01e-19,95;UBERON:0000924,1.01e-19,95;UBERON:0006601,1.01e-19,95;UBERON:0001049,1.34e-19,52;UBERON:0005068,1.34e-19,52;UBERON:0006241,1.34e-19,52;UBERON:0007135,1.34e-19,52;UBERON:0001017,2.38e-19,73;UBERON:0002346,4.89e-18,64;UBERON:0003075,4.89e-18,64;UBERON:0007284,4.89e-18,64;UBERON:0000955,3.48e-17,47;UBERON:0006238,3.48e-17,47;UBERON:0002020,8.77e-17,34;UBERON:0002616,1.34e-16,46;UBERON:0010371,1.82e-16,73;UBERON:0010314,2.94e-16,92;UBERON:0003528,1.49e-14,29;UBERON:0002791,1.49e-14,29;UBERON:0001893,1.49e-14,29;UBERON:0004111,1.62e-14,122;UBERON:0003080,2.76e-14,40;UBERON:0002780,1.08e-13,39;UBERON:0001890,1.08e-13,39;UBERON:0006240,1.08e-13,39;UBERON:0000025,1.93e-13,114;UBERON:0003056,5.02e-13,49;UBERON:0000956,4.35e-11,21;UBERON:0001869,4.35e-11,21;UBERON:0000203,4.35e-11,21;UBERON:0002619,6.25e-10,17;UBERON:0002021,8.61e-08,10;UBERON:0000411,8.61e-08,10;UBERON:0001950,8.61e-08,10;UBERON:0007023,1.85e-07,51|phase1_expression=9.76907967339243,5.58360652222978,6.3699893514535,3.32710632437513,4.00716583957078,5.54001597309236,3.73780224952841,10.2007425518845,3.94208422024667,6.78787126333781,7.53359060192222,9.97151987441705,9.58724087614752,14.1621051918776,7.32841475994458,3.23960427823721,6.29605690315332,7.09789872056035,6.85572168028694,5.51706547337439,18.7945671233864,6.55320277925843,3.6567970479451,5.11975752938901,6.19405058881359,4.59385571292016,3.01533397311352,5.17130958446134,7.22088993934221,4.03248207615889,4.6563407237614,10.1604907753541,3.69038872550742,0,4.91047753577167,4.65457007003779,3.47087905646027,7.95210098400125,3.906676722619,9.42342739152837,8.82347232046521,7.5135003345429,10.1957174136542,28.4526808624805,24.026332699025,16.152114190228,13.3006528539167,12.209408757305,16.4764637050854,20.609569301874,8.53917171914711,10.062679505548,8.72469551500229,13.7818806982155,13.4437519656986,13.8920095459411,10.8882707176728,18.0485232297105,14.7691016427506,16.398720357433,26.6209189472595,8.80995783379743,11.5608323494448,32.8463396807711,43.5101199529469,29.1296847127901,17.9760066311043,10.7581125490035,14.7239249478038,19.1708432431001,13.4607975264884,27.9937964715728,30.0381215694194,15.0663683034393,14.8560480078266,16.5459381589804,20.9220173898839,30.6449611404451,31.6429458507862,17.4089899803856,20.4932321669398,18.7528813400434,25.9640189071284,28.138130501584,26.586895113165,22.0971439105251,21.7828671622628,17.5215479075783,33.6981560332669,17.986031305415,12.7540375028738,9.46466264679525,29.2387673494333,6.47643829965381,11.0461990966104,9.85659151614138,12.0782201313307,11.4188316127299,9.35229616570328,7.42013106471715,9.01397886570755,8.98285341900225,0,0,8.22665955842614,6.33399663687746,7.58286667522175,12.5602267690966,27.7063535502474,18.2583831049734,6.59244241711316,8.22056791442781,6.6878494204257,10.7013074792362,15.1689432205059,12.8179923156269,26.2026665798436,21.8345028949067,11.4999371753484,9.86777784679196,8.833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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:100494 | |||
|HGNC= | |||
|MCL_coexpression_id=799 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3YUL0 | |||
|association_with_transcript=0bp_to_ENSMUST00000143889,ENSMUST00000150992_5end | |||
|cluster_id=chr5:139960374..139960427,- | |||
|description=CAGE_peak_1_at_Zfand2a_5end | |||
|id=chr5:139960374..139960427,- | |||
|ontology_enrichment_celltype=CL:0000117!2.97e-09!23;CL:0000337!2.97e-09!23;CL:0000055!6.34e-09!50;CL:0000393!2.87e-08!39;CL:0000211!2.87e-08!39;CL:0002319!7.92e-08!43;CL:0000221!1.88e-07!44;CL:0000133!1.88e-07!44;CL:0000540!7.05e-07!33;CL:0000047!7.05e-07!33;CL:0000031!7.05e-07!33;CL:0000404!7.05e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.97e-09,23;CL:0000337,2.97e-09,23;CL:0000393,2.87e-08,39;CL:0000211,2.87e-08,39;CL:0002319,7.92e-08,43;CL:0000221,1.88e-07,44;CL:0000133,1.88e-07,44;CL:0000540,7.05e-07,33;CL:0000047,7.05e-07,33;CL:0000031,7.05e-07,33;CL:0000404,7.05e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.57e-20!75;UBERON:0001016!2.57e-20!75;UBERON:0001049!1.34e-19!52;UBERON:0005068!1.34e-19!52;UBERON:0006241!1.34e-19!52;UBERON:0007135!1.34e-19!52;UBERON:0001017!2.38e-19!73;UBERON:0005743!2.38e-19!73;UBERON:0000955!9.01e-19!50;UBERON:0006238!9.01e-19!50;UBERON:0004121!1.82e-18!102;UBERON:0000924!1.82e-18!102;UBERON:0006601!1.82e-18!102;UBERON:0002616!3.57e-18!49;UBERON:0000033!6.24e-17!63;UBERON:0002020!8.77e-17!34;UBERON:0002346!2.70e-16!71;UBERON:0003075!2.70e-16!71;UBERON:0007284!2.70e-16!71;UBERON:0002791!1.49e-14!29;UBERON:0003528!1.49e-14!29;UBERON:0001893!1.49e-14!29;UBERON:0004111!1.62e-14!122;UBERON:0003080!2.76e-14!40;UBERON:0002780!1.08e-13!39;UBERON:0001890!1.08e-13!39;UBERON:0006240!1.08e-13!39;UBERON:0000025!1.93e-13!114;UBERON:0003056!5.02e-13!49;UBERON:0000956!4.35e-11!21;UBERON:0001869!4.35e-11!21;UBERON:0000203!4.35e-11!21;UBERON:0002619!6.25e-10!17;UBERON:0000153!5.16e-08!94;UBERON:0002021!8.61e-08!10;UBERON:0000411!8.61e-08!10;UBERON:0001950!8.61e-08!10;UBERON:0007023!1.85e-07!51;UBERON:0007811!2.88e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.47e-20,54;UBERON:0001016,2.57e-20,75;UBERON:0004121,1.01e-19,95;UBERON:0000924,1.01e-19,95;UBERON:0006601,1.01e-19,95;UBERON:0001049,1.34e-19,52;UBERON:0005068,1.34e-19,52;UBERON:0006241,1.34e-19,52;UBERON:0007135,1.34e-19,52;UBERON:0001017,2.38e-19,73;UBERON:0002346,4.89e-18,64;UBERON:0003075,4.89e-18,64;UBERON:0007284,4.89e-18,64;UBERON:0000955,3.48e-17,47;UBERON:0006238,3.48e-17,47;UBERON:0002020,8.77e-17,34;UBERON:0002616,1.34e-16,46;UBERON:0010371,1.82e-16,73;UBERON:0010314,2.94e-16,92;UBERON:0003528,1.49e-14,29;UBERON:0002791,1.49e-14,29;UBERON:0001893,1.49e-14,29;UBERON:0004111,1.62e-14,122;UBERON:0003080,2.76e-14,40;UBERON:0002780,1.08e-13,39;UBERON:0001890,1.08e-13,39;UBERON:0006240,1.08e-13,39;UBERON:0000025,1.93e-13,114;UBERON:0003056,5.02e-13,49;UBERON:0000956,4.35e-11,21;UBERON:0001869,4.35e-11,21;UBERON:0000203,4.35e-11,21;UBERON:0002619,6.25e-10,17;UBERON:0002021,8.61e-08,10;UBERON:0000411,8.61e-08,10;UBERON:0001950,8.61e-08,10;UBERON:0007023,1.85e-07,51 | |||
|phase1_expression=9.76907967339243,5.58360652222978,6.3699893514535,3.32710632437513,4.00716583957078,5.54001597309236,3.73780224952841,10.2007425518845,3.94208422024667,6.78787126333781,7.53359060192222,9.97151987441705,9.58724087614752,14.1621051918776,7.32841475994458,3.23960427823721,6.29605690315332,7.09789872056035,6.85572168028694,5.51706547337439,18.7945671233864,6.55320277925843,3.6567970479451,5.11975752938901,6.19405058881359,4.59385571292016,3.01533397311352,5.17130958446134,7.22088993934221,4.03248207615889,4.6563407237614,10.1604907753541,3.69038872550742,0,4.91047753577167,4.65457007003779,3.47087905646027,7.95210098400125,3.906676722619,9.42342739152837,8.82347232046521,7.5135003345429,10.1957174136542,28.4526808624805,24.026332699025,16.152114190228,13.3006528539167,12.209408757305,16.4764637050854,20.609569301874,8.53917171914711,10.062679505548,8.72469551500229,13.7818806982155,13.4437519656986,13.8920095459411,10.8882707176728,18.0485232297105,14.7691016427506,16.398720357433,26.6209189472595,8.80995783379743,11.5608323494448,32.8463396807711,43.5101199529469,29.1296847127901,17.9760066311043,10.7581125490035,14.7239249478038,19.1708432431001,13.4607975264884,27.9937964715728,30.0381215694194,15.0663683034393,14.8560480078266,16.5459381589804,20.9220173898839,30.6449611404451,31.6429458507862,17.4089899803856,20.4932321669398,18.7528813400434,25.9640189071284,28.138130501584,26.586895113165,22.0971439105251,21.7828671622628,17.5215479075783,33.6981560332669,17.986031305415,12.7540375028738,9.46466264679525,29.2387673494333,6.47643829965381,11.0461990966104,9.85659151614138,12.0782201313307,11.4188316127299,9.35229616570328,7.42013106471715,9.01397886570755,8.98285341900225,0,0,8.22665955842614,6.33399663687746,7.58286667522175,12.5602267690966,27.7063535502474,18.2583831049734,6.59244241711316,8.22056791442781,6.6878494204257,10.7013074792362,15.1689432205059,12.8179923156269,26.2026665798436,21.8345028949067,11.4999371753484,9.86777784679196,8.83366073841574,6.78825354389311,13.0474232852686,31.9131068742586,27.2280718857492,9.70736809792647,11.2626217035565,11.3981518888747,15.5025677029139,39.2451475240635,35.2275464170342,25.00521607046,55.4499581413362,58.3031242713154,42.1809730455907,44.1296235544301,12.8317598451399,11.6942552373487,15.1633655060205,19.5710925974421,7.54698569183682,8.73627996847197,10.2635413989049,9.19299388797862,14.9680298132921,12.0426897067759,13.3056448874815,19.4027528054262,15.7364634840975,12.1027891307404,14.4279921814438,9.42541649438572,11.1218899690239,14.9748431604532,10.7006710932131,9.55364480728767,9.12877143507205,9.00717674901503,14.4923384691752,11.1847917169171,8.91199027928165,10.8037236876609,14.4414288706978,10.6252685143598,9.87309522479221,11.1616293480196,8.04820204198858,14.5956677958962,14.1521470925593,16.4167464079095,15.6462802423502,13.3041988557052,15.1489579550825,12.7496097822353,48.5769781183134,28.1958637919239,17.5121954981413,10.0491215332147,9.38468302355029,9.52170354627798,7.7320476793256,6.85723983719365,6.89371935919098,8.17970192284004,8.54152310780121,10.0466362381647,11.5614196048124,13.3300836267571,14.2323783596958,11.6846523125049,13.400559092231,11.1519113022446,12.5180814629034,8.45438993311993,14.6520056375005,8.75700709734851,9.89157684554891,9.18779240563173,10.8766843853723,9.29943932271494,10.3619160375307,10.488758933353,10.3758419480502,5.00535317148282,6.4864468387357,6.07127703439105,5.47722327748958,5.788251834058,5.60176873919124,5.17853047411459,8.43103179230184,6.04035109013779,12.9391385874619,8.18710084870708,8.11297950097858,10.6083128737787,12.19902411949,5.30687873499704,22.7246423904924,7.01118223550794,11.8964432802679,8.65699937453459,10.0916806764056,11.0554129911598,9.75978927632656,11.5128852236101,14.6600684018758,18.1601045511995,18.018388858296,18.8442811923099,21.9309926969687,20.1062191428301,46.7452980211744,39.7051149187658,9.34352118736169,9.65778612066564,39.0137933670334,39.2659150083881,10.3279015587306,9.59389523376617,12.304820557234,13.2749173060857,10.1248996934415,6.69112634267146,11.5855310522845,10.190755108398,11.7395103485719,12.8592577480977,9.09161889277004,33.7387382242897,15.0456490320765,10.5058706163681,12.0536349921646,15.8371318053634,11.9470624505967,10.1967867185092,4.53485335447127,6.60117779145643,9.15435867930396,9.53048958626175,12.4045580720746,11.6330793432802,11.0514187299264,12.009396801561,7.37930260024991,5.15677716240934,19.7454971337197,9.54323798365944,10.2193360188376,6.21577401591618,13.8325382240973,9.81028496811388,13.4930196893739,13.0919928119278,22.5284839741162,29.6564899209348,18.0833286405069,19.2916915941532,12.7556897089765,12.0625849856312,9.54978752025092,11.9822856813895,11.659233465194,43.3895206704593,8.37267315909478,6.81076664278634,8.88933731374616,11.6788443342908,9.29520748502971,8.23601423543482,11.2185763795945,12.3157278044819,13.1289975114203,19.0934123603023,7.27572785236611,7.72613975082025,8.2084059024569,8.7817084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| |||
|short_description=p1@Zfand2a | |||
}} |
Revision as of 23:06, 3 August 2015
Short description: | p1@Zfand2a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Zfand2a_5end |
Coexpression cluster: | MCL_coexpression_mm9:799 |
Association with transcript: | 0bp_to_ENSMUST00000143889, ENSMUST00000150992_5end |
EntrezGene: | 100494 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.97e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.97e-09 | 23 |
electrically responsive cell | 2.87e-08 | 39 |
electrically active cell | 2.87e-08 | 39 |
neural cell | 7.92e-08 | 43 |
ectodermal cell | 1.88e-07 | 44 |
neurectodermal cell | 1.88e-07 | 44 |
neuron | 7.05e-07 | 33 |
neuronal stem cell | 7.05e-07 | 33 |
neuroblast | 7.05e-07 | 33 |
electrically signaling cell | 7.05e-07 | 33 |