FFCP PHASE1:Mm9::chr10:119913954..119913972,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=15364|HGNC=|MCL_coexpression_id=753|UniProt=P52927,Q6NSP9|association_with_transcript=18bp_to_NM_010441,uc007hfb.1,uc011xow.1_5end|description=CAGE_peak_8_at_Hmga2_5end|id=chr10:119913954..119913972,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000192,9.77e-08,3;CL:0000359,9.77e-08,3;CL:0002539,9.77e-08,3;CL:0000514,9.77e-08,3;CL:0000217,6.26e-07,2;CL:0000328,6.26e-07,2;CL:0002573,6.26e-07,2;CL:0002376,6.26e-07,2;CL:0000218,6.26e-07,2;CL:0000692,6.26e-07,2;CL:0002377,6.26e-07,2;CL:0002375,6.26e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!2.82e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000010,9.03e-11,11;UBERON:0000013,5.60e-08,3;UBERON:0001135,9.77e-08,3;UBERON:0004237,9.77e-08,3;UBERON:0004695,9.77e-08,3;UBERON:0002111,9.77e-08,3;UBERON:0004178,9.77e-08,3|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6366586336825,1.4192770370732,1.10128051297009,0,0,0.219686182734472,0.194429899074283,0.55994568650145,0,0,0,0,0.771778308107841,0.286533439938757,0.515672092277442,0.202316460859598,0,0,2.37191172448392,0,0.899899717281399,1.97773272513395,0.7104801149461,0.299600110518405,0,0.103689612308478,0.270011876663381,0,0.285650984403804,0,0,0.0958454710182364,0,0,0,0,0,0.182975287204819,0,0,0,0,0,0.142371680799103,0.372798891650601,10.7531194533121,9.8998743739889,0.579728977403356,0,0,0,0,0,0,0.340860645156116,0,0,0.14084341977668,0,0,0,0.865964164044856,2.02687892380079,0.505524445014783,0,0,0,0.520455980298408,0.608930956624282,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599075622529601,0,0.127070227073065,0,0,0,0,0,0,0,0.407357455401265,0,0,0,1.04096354370163,0.919608417733892,0.720248519221397,0.30140963567143,0.95251098811859,0.640568601424249,0.843315521037559,0,5.17363183038821,7.18603104637713,3.16712023495108,0.43839146485515,0.278047249225598,0,0.411564272815887,3.18454826909589,0,0,0,0.621377317606506,0.703578179943289,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,7.89166526980366,4.18026009348789,1.28867461322093,0.201683524623343,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0,0,1.51734320762465,1.25673363870702,0,0,0.775809948670503,0.420814919341911,0,0,0,0,0,1.00107063429656,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,1.32643988239339,0.325929952884052,1.35796068620151,0.704070744865506,0.502518772325447,0.238043640886014,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0.983609672260053,0,0.315508219416257,1.17131623288992,0.646270193198397,0.955875191810208,3.11918143715352,0,1.21443210502468,1.75353514746787,1.97643888973262,0,0.141940085208269,0.712262414669021,0.651547837414304,0,0,1.21390318077491,0.906970670894253,0.188605079755898,0,0,0,0,0,0,0,0,0,2.16073312837572,1.29358683782755,0.428674070063185,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0.412773735926445,0.185194527369712,0,0,0,0.339956859987711,0,0.552799895217695,0.954670618015114,7.90839983952838,0.406638934253697,0.540026704109006,0,0,0,0,0,0.129614973291793,0,0,1.49516546043979,0.992750942742586,0,0.129159823477731,0.168956125490778,0,0,0.104859344425711,0,0,0,1.21635129174099,1.1298205288131,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0.269141569828427,0.503653849092235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.81209146471389,5.1873233542134,2.04880326904961,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0,0,0,0.188626341386076,0.468207537349412,0.128050304809739,0.0574354689556133,0,0.347652977834566,0.38581844092741,0,0.147198920134397,0.685738504770831,0,0.238436189947321,0.581385666529314,0.188218760830661,0.0846146078916765,0,0,0.543216455383447,0,0.118635018124174,0.0985044823755635,0,0,0.385813221962283,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0.231867835620421|short_description=p8@Hmga2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:15364 | |||
|HGNC= | |||
|MCL_coexpression_id=753 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P52927,uniprot:Q6NSP9 | |||
|association_with_transcript=18bp_to_NM_010441,uc007hfb.1,uc011xow.1_5end | |||
|cluster_id=chr10:119913954..119913972,- | |||
|description=CAGE_peak_8_at_Hmga2_5end | |||
|id=chr10:119913954..119913972,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,9.77e-08,3;CL:0000359,9.77e-08,3;CL:0002539,9.77e-08,3;CL:0000514,9.77e-08,3;CL:0000217,6.26e-07,2;CL:0000328,6.26e-07,2;CL:0002573,6.26e-07,2;CL:0002376,6.26e-07,2;CL:0000218,6.26e-07,2;CL:0000692,6.26e-07,2;CL:0002377,6.26e-07,2;CL:0002375,6.26e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!2.82e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,9.03e-11,11;UBERON:0000013,5.60e-08,3;UBERON:0001135,9.77e-08,3;UBERON:0004237,9.77e-08,3;UBERON:0004695,9.77e-08,3;UBERON:0002111,9.77e-08,3;UBERON:0004178,9.77e-08,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6366586336825,1.4192770370732,1.10128051297009,0,0,0.219686182734472,0.194429899074283,0.55994568650145,0,0,0,0,0.771778308107841,0.286533439938757,0.515672092277442,0.202316460859598,0,0,2.37191172448392,0,0.899899717281399,1.97773272513395,0.7104801149461,0.299600110518405,0,0.103689612308478,0.270011876663381,0,0.285650984403804,0,0,0.0958454710182364,0,0,0,0,0,0.182975287204819,0,0,0,0,0,0.142371680799103,0.372798891650601,10.7531194533121,9.8998743739889,0.579728977403356,0,0,0,0,0,0,0.340860645156116,0,0,0.14084341977668,0,0,0,0.865964164044856,2.02687892380079,0.505524445014783,0,0,0,0.520455980298408,0.608930956624282,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599075622529601,0,0.127070227073065,0,0,0,0,0,0,0,0.407357455401265,0,0,0,1.04096354370163,0.919608417733892,0.720248519221397,0.30140963567143,0.95251098811859,0.640568601424249,0.843315521037559,0,5.17363183038821,7.18603104637713,3.16712023495108,0.43839146485515,0.278047249225598,0,0.411564272815887,3.18454826909589,0,0,0,0.621377317606506,0.703578179943289,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,7.89166526980366,4.18026009348789,1.28867461322093,0.201683524623343,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0,0,1.51734320762465,1.25673363870702,0,0,0.775809948670503,0.420814919341911,0,0,0,0,0,1.00107063429656,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,1.32643988239339,0.325929952884052,1.35796068620151,0.704070744865506,0.502518772325447,0.238043640886014,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0.983609672260053,0,0.315508219416257,1.17131623288992,0.646270193198397,0.955875191810208,3.11918143715352,0,1.21443210502468,1.75353514746787,1.97643888973262,0,0.141940085208269,0.712262414669021,0.651547837414304,0,0,1.21390318077491,0.906970670894253,0.188605079755898,0,0,0,0,0,0,0,0,0,2.16073312837572,1.29358683782755,0.428674070063185,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0.412773735926445,0.185194527369712,0,0,0,0.339956859987711,0,0.552799895217695,0.954670618015114,7.90839983952838,0.406638934253697,0.540026704109006,0,0,0,0,0,0.129614973291793,0,0,1.49516546043979,0.992750942742586,0,0.129159823477731,0.168956125490778,0,0,0.104859344425711,0,0,0,1.21635129174099,1.1298205288131,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0.269141569828427,0.503653849092235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.81209146471389,5.1873233542134,2.04880326904961,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0,0,0,0.188626341386076,0.468207537349412,0.128050304809739,0.0574354689556133,0,0.347652977834566,0.38581844092741,0,0.147198920134397,0.685738504770831,0,0.238436189947321,0.581385666529314,0.188218760830661,0.0846146078916765,0,0,0.543216455383447,0,0.118635018124174,0.0985044823755635,0,0,0.385813221962283,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0.231867835620421 | |||
|short_description=p8@Hmga2 | |||
}} |
Revision as of 23:20, 3 August 2015
Short description: | p8@Hmga2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Hmga2_5end |
Coexpression cluster: | MCL_coexpression_mm9:753 |
Association with transcript: | 18bp_to_NM_010441, uc007hfb.1, uc011xow.1_5end |
EntrezGene: | 15364 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 9.77e-08 | 3 |
vascular associated smooth muscle cell | 9.77e-08 | 3 |
aortic smooth muscle cell | 9.77e-08 | 3 |
smooth muscle myoblast | 9.77e-08 | 3 |
insulating cell | 6.26e-07 | 2 |
myelin accumulating cell | 6.26e-07 | 2 |
Schwann cell | 6.26e-07 | 2 |
non-myelinating Schwann cell | 6.26e-07 | 2 |
myelinating Schwann cell;;Schwann cell | 6.26e-07 | 2 |
terminal Schwann cell | 6.26e-07 | 2 |
immature Schwann cell | 6.26e-07 | 2 |
Schwann cell precursor | 6.26e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 9.03e-11 | 11 |
sympathetic nervous system | 5.60e-08 | 3 |
smooth muscle tissue | 9.77e-08 | 3 |
blood vessel smooth muscle | 9.77e-08 | 3 |
arterial system smooth muscle | 9.77e-08 | 3 |
artery smooth muscle tissue | 9.77e-08 | 3 |
aorta smooth muscle tissue | 9.77e-08 | 3 |