FFCP PHASE1:Mm9::chr7:117129823..117129860,-: Difference between revisions
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{{FFCP|EntrezGene=233724|HGNC=|UniProt=D6RFP3|association_with_transcript=-24bp_to_uc009jep.1,uc009jeq.1_5end|description=CAGE_peak_3_at_Tmem41b_5end|id=chr7:117129823..117129860,-|ontology_enrichment_celltype=CL:0000055!6.13e-21!50;CL:0000221!3.45e-20!44;CL:0000133!3.45e-20!44;CL:0002319!7.93e-20!43;CL:0000393!3.73e-18!39;CL:0000211!3.73e-18!39;CL:0000540!2.76e-17!33;CL:0000047!2.76e-17!33;CL:0000031!2.76e-17!33;CL:0000404!2.76e-17!33;CL:0000117!1.95e-13!23;CL:0000337!1.95e-13!23;CL:0002321!5.38e-07!70;CL:0000220!5.38e-07!70|ontology_enrichment_celltype_v019_2=CL:0000221,1.57e-20,44;CL:0000133,1.57e-20,44;CL:0002319,3.66e-20,43;CL:0000393,1.85e-18,39;CL:0000211,1.85e-18,39;CL:0000540,1.42e-17,33;CL:0000047,1.42e-17,33;CL:0000031,1.42e-17,33;CL:0000404,1.42e-17,33;CL:0000117,1.18e-13,23;CL:0000337,1.18e-13,23;CL:0002321,3.53e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.45e-25!75;UBERON:0001016!4.45e-25!75;UBERON:0001017!1.30e-23!73;UBERON:0005743!1.30e-23!73;UBERON:0004121!2.41e-22!102;UBERON:0000924!2.41e-22!102;UBERON:0006601!2.41e-22!102;UBERON:0002346!5.45e-17!71;UBERON:0003075!5.45e-17!71;UBERON:0007284!5.45e-17!71;UBERON:0000033!1.93e-14!63;UBERON:0001049!2.71e-14!52;UBERON:0005068!2.71e-14!52;UBERON:0006241!2.71e-14!52;UBERON:0007135!2.71e-14!52;UBERON:0000955!2.15e-13!50;UBERON:0006238!2.15e-13!50;UBERON:0002020!3.45e-13!34;UBERON:0002616!7.11e-13!49;UBERON:0003056!9.56e-11!49;UBERON:0002791!1.16e-10!29;UBERON:0003528!1.16e-10!29;UBERON:0001893!1.16e-10!29;UBERON:0003080!2.80e-09!40;UBERON:0002780!6.63e-09!39;UBERON:0001890!6.63e-09!39;UBERON:0006240!6.63e-09!39|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.66e-25,75;UBERON:0001017,5.18e-24,73;UBERON:0004121,3.98e-22,95;UBERON:0000924,3.98e-22,95;UBERON:0006601,3.98e-22,95;UBERON:0010314,4.40e-19,92;UBERON:0002346,2.54e-17,64;UBERON:0003075,2.54e-17,64;UBERON:0007284,2.54e-17,64;UBERON:0000073,1.20e-15,54;UBERON:0001049,1.60e-14,52;UBERON:0005068,1.60e-14,52;UBERON:0006241,1.60e-14,52;UBERON:0007135,1.60e-14,52;UBERON:0010371,3.05e-14,73;UBERON:0002020,2.11e-13,34;UBERON:0000955,6.63e-12,47;UBERON:0006238,6.63e-12,47;UBERON:0002616,2.15e-11,46;UBERON:0003056,6.54e-11,49;UBERON:0003528,7.92e-11,29;UBERON:0002791,7.92e-11,29;UBERON:0001893,7.92e-11,29;UBERON:0003080,2.04e-09,40;UBERON:0002780,4.91e-09,39;UBERON:0001890,4.91e-09,39;UBERON:0006240,4.91e-09,39;UBERON:0000025,5.91e-07,114;UBERON:0000956,8.92e-07,21;UBERON:0001869,8.92e-07,21;UBERON:0000203,8.92e-07,21|phase1_expression=3.36312578920067,0.348975407639361,0.454999239389536,1.51232105653415,0,0.671517087647559,0.467225281191051,0.774739940649458,0.422366166455,0.70219357896598,1.19852577757853,1.19658238493005,0.342401459862411,0.34968160967599,0,0.607425802169478,0.699561878128147,0.630924330716475,0.548457734422955,0.42438965179803,4.25216450755349,1.48936426801328,1.04479915655574,0.319984845586813,0.68822784320151,0.57423196411502,0.86152399231815,1.07735616342945,0.570070258369122,0.756090389279792,0.886922042621219,0,0,0,0.288851619751275,0.166234645358492,0,1.67412652294763,1.5626706890476,4.71171369576418,1.76469446409304,5.46436387966757,1.45653105909346,1.88845226963366,2.12891555560981,2.75320128242522,2.34717403304412,2.61630187656536,1.97717564461025,3.69416808241138,3.3596741190087,5.75010257459886,1.00669563634642,0,0.672187598284928,4.88792928468299,4.01146815914259,4.12537673821954,5.05791152148994,3.1739458756322,3.80298842103708,1.35537812827653,3.55717918444456,2.2497492932035,0.988866362566974,0.7104801149461,2.69640099466564,3.07374644257244,4.35496371695606,4.05017814995072,4.83747411108179,4.85606673486466,4.8591079009355,5.51208596467293,6.13411014516713,7.35375029288017,5.50579404996943,5.87361755191863,6.29786786350598,6.59431438650969,6.12967212136145,7.8137005583514,5.30447698102624,6.75315132038016,5.80633341551878,5.59794312399969,6.26435395516053,3.91438836233131,10.2230360999798,6.65029728939713,0.579728977403356,2.58127163094416,0,0,0,0,0.983110940922263,3.40860645156115,2.59786004602869,1.41335829804136,3.80277233397037,0,0,7.11066703153331,0.865964164044856,0.506719730950197,0,1.48439043634778,1.8125651855302,3.26572705942614,3.81667718885499,1.52232739156071,1.38369298353635,3.16517545160507,2.23418543557839,1.63366568728578,1.97755974187499,1.73519228303894,4.42305275974937,2.42650274921114,1.54589062922275,1.93950101254089,1.86391761218122,4.68449275218475,4.39838084308256,1.27728527604296,1.31796636956512,0.599902730993408,1.39777249780371,4.19413790333504,3.66000482254901,3.39266750704734,2.43354048269187,3.3243009452943,5.81806524766768,2.75810147215188,2.44414473240759,2.73695335342205,1.51633655060205,2.10441855886474,1.95180664444056,2.98872735763515,3.24111833649629,2.56198190320716,3.46986145671772,3.71529788826064,4.68508622798644,2.32833033665114,1.72454394346274,0.756424320671277,1.40760899331159,1.97276159184817,2.78047249225598,2.78601733217733,1.64625709126355,2.58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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:233724 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D6RFP3 | |||
|association_with_transcript=-24bp_to_uc009jep.1,uc009jeq.1_5end | |||
|cluster_id=chr7:117129823..117129860,- | |||
|description=CAGE_peak_3_at_Tmem41b_5end | |||
|id=chr7:117129823..117129860,- | |||
|ontology_enrichment_celltype=CL:0000055!6.13e-21!50;CL:0000221!3.45e-20!44;CL:0000133!3.45e-20!44;CL:0002319!7.93e-20!43;CL:0000393!3.73e-18!39;CL:0000211!3.73e-18!39;CL:0000540!2.76e-17!33;CL:0000047!2.76e-17!33;CL:0000031!2.76e-17!33;CL:0000404!2.76e-17!33;CL:0000117!1.95e-13!23;CL:0000337!1.95e-13!23;CL:0002321!5.38e-07!70;CL:0000220!5.38e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.57e-20,44;CL:0000133,1.57e-20,44;CL:0002319,3.66e-20,43;CL:0000393,1.85e-18,39;CL:0000211,1.85e-18,39;CL:0000540,1.42e-17,33;CL:0000047,1.42e-17,33;CL:0000031,1.42e-17,33;CL:0000404,1.42e-17,33;CL:0000117,1.18e-13,23;CL:0000337,1.18e-13,23;CL:0002321,3.53e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.45e-25!75;UBERON:0001016!4.45e-25!75;UBERON:0001017!1.30e-23!73;UBERON:0005743!1.30e-23!73;UBERON:0004121!2.41e-22!102;UBERON:0000924!2.41e-22!102;UBERON:0006601!2.41e-22!102;UBERON:0002346!5.45e-17!71;UBERON:0003075!5.45e-17!71;UBERON:0007284!5.45e-17!71;UBERON:0000033!1.93e-14!63;UBERON:0001049!2.71e-14!52;UBERON:0005068!2.71e-14!52;UBERON:0006241!2.71e-14!52;UBERON:0007135!2.71e-14!52;UBERON:0000955!2.15e-13!50;UBERON:0006238!2.15e-13!50;UBERON:0002020!3.45e-13!34;UBERON:0002616!7.11e-13!49;UBERON:0003056!9.56e-11!49;UBERON:0002791!1.16e-10!29;UBERON:0003528!1.16e-10!29;UBERON:0001893!1.16e-10!29;UBERON:0003080!2.80e-09!40;UBERON:0002780!6.63e-09!39;UBERON:0001890!6.63e-09!39;UBERON:0006240!6.63e-09!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.66e-25,75;UBERON:0001017,5.18e-24,73;UBERON:0004121,3.98e-22,95;UBERON:0000924,3.98e-22,95;UBERON:0006601,3.98e-22,95;UBERON:0010314,4.40e-19,92;UBERON:0002346,2.54e-17,64;UBERON:0003075,2.54e-17,64;UBERON:0007284,2.54e-17,64;UBERON:0000073,1.20e-15,54;UBERON:0001049,1.60e-14,52;UBERON:0005068,1.60e-14,52;UBERON:0006241,1.60e-14,52;UBERON:0007135,1.60e-14,52;UBERON:0010371,3.05e-14,73;UBERON:0002020,2.11e-13,34;UBERON:0000955,6.63e-12,47;UBERON:0006238,6.63e-12,47;UBERON:0002616,2.15e-11,46;UBERON:0003056,6.54e-11,49;UBERON:0003528,7.92e-11,29;UBERON:0002791,7.92e-11,29;UBERON:0001893,7.92e-11,29;UBERON:0003080,2.04e-09,40;UBERON:0002780,4.91e-09,39;UBERON:0001890,4.91e-09,39;UBERON:0006240,4.91e-09,39;UBERON:0000025,5.91e-07,114;UBERON:0000956,8.92e-07,21;UBERON:0001869,8.92e-07,21;UBERON:0000203,8.92e-07,21 | |||
|phase1_expression=3.36312578920067,0.348975407639361,0.454999239389536,1.51232105653415,0,0.671517087647559,0.467225281191051,0.774739940649458,0.422366166455,0.70219357896598,1.19852577757853,1.19658238493005,0.342401459862411,0.34968160967599,0,0.607425802169478,0.699561878128147,0.630924330716475,0.548457734422955,0.42438965179803,4.25216450755349,1.48936426801328,1.04479915655574,0.319984845586813,0.68822784320151,0.57423196411502,0.86152399231815,1.07735616342945,0.570070258369122,0.756090389279792,0.886922042621219,0,0,0,0.288851619751275,0.166234645358492,0,1.67412652294763,1.5626706890476,4.71171369576418,1.76469446409304,5.46436387966757,1.45653105909346,1.88845226963366,2.12891555560981,2.75320128242522,2.34717403304412,2.61630187656536,1.97717564461025,3.69416808241138,3.3596741190087,5.75010257459886,1.00669563634642,0,0.672187598284928,4.88792928468299,4.01146815914259,4.12537673821954,5.05791152148994,3.1739458756322,3.80298842103708,1.35537812827653,3.55717918444456,2.2497492932035,0.988866362566974,0.7104801149461,2.69640099466564,3.07374644257244,4.35496371695606,4.05017814995072,4.83747411108179,4.85606673486466,4.8591079009355,5.51208596467293,6.13411014516713,7.35375029288017,5.50579404996943,5.87361755191863,6.29786786350598,6.59431438650969,6.12967212136145,7.8137005583514,5.30447698102624,6.75315132038016,5.80633341551878,5.59794312399969,6.26435395516053,3.91438836233131,10.2230360999798,6.65029728939713,0.579728977403356,2.58127163094416,0,0,0,0,0.983110940922263,3.40860645156115,2.59786004602869,1.41335829804136,3.80277233397037,0,0,7.11066703153331,0.865964164044856,0.506719730950197,0,1.48439043634778,1.8125651855302,3.26572705942614,3.81667718885499,1.52232739156071,1.38369298353635,3.16517545160507,2.23418543557839,1.63366568728578,1.97755974187499,1.73519228303894,4.42305275974937,2.42650274921114,1.54589062922275,1.93950101254089,1.86391761218122,4.68449275218475,4.39838084308256,1.27728527604296,1.31796636956512,0.599902730993408,1.39777249780371,4.19413790333504,3.66000482254901,3.39266750704734,2.43354048269187,3.3243009452943,5.81806524766768,2.75810147215188,2.44414473240759,2.73695335342205,1.51633655060205,2.10441855886474,1.95180664444056,2.98872735763515,3.24111833649629,2.56198190320716,3.46986145671772,3.71529788826064,4.68508622798644,2.32833033665114,1.72454394346274,0.756424320671277,1.40760899331159,1.97276159184817,2.78047249225598,2.78601733217733,1.64625709126355,2.58744546864041,0.702213187313235,1.54408744268829,1.13665399758237,2.07125772535502,1.40715635988658,4.14142741360334,3.07768156260773,2.36117078096885,2.1597395804233,2.09280550275367,2.95100741539581,1.98501082024188,2.63295759861569,3.447516745661,2.26992666728396,1.75439984910399,1.75640092232841,0.805238512562231,3.15434922846191,4.73361216944708,1.98251269790279,0,2.77274725695804,1.39342003116263,1.54640953586512,1.61346819698674,0.22237804384487,0.380451252225118,0.474529061544512,0.988193728344065,1.50801125280162,1.1937388322469,2.14460495831032,0.898819408654221,1.51296634912286,0.199141273254367,3.22435431620239,1.48523066392647,1.1270773567308,2.03651327845314,2.71533482034676,1.96380295692892,1.7706230394792,1.47610147979602,0.784993639206874,0.987177311374404,0.296452627087149,0.667380422864376,0.393117990226406,0.899448449539415,1.21716072833102,0.482354319504834,0,0.575392274901621,0.324270453550071,0,0,1.11642284300551,1.24815069245824,0,0.179397413521912,0.964887042726734,1.47802552133284,1.70542270593436,3.25929952884052,1.52770577197669,2.81628297946203,2.68010011906905,2.38043640886014,2.34160377429359,3.4679731703362,2.43611158613652,2.87018583583477,2.62181303545181,1.55416483679306,1.59113964439663,0,1.08781136763742,0.491764273019036,0.275936746304732,4.65596710964597,5.86058432961016,0.983609672260053,2.01976741763498,2.83957397474631,5.46614242015294,4.09304455692318,4.77937595905104,5.56996685205985,3.96307143104365,4.85772842009873,3.21481443702443,4.34816555741176,5.46246237917072,4.25820255624806,4.27357448801413,2.93196526836437,2.96946221350564,0,1.45668381692989,0.302323556964751,0.943025398779491,1.77181135728464,1.53717573971964,0.775284879504663,0.727067458955011,0.712994756769443,0.632073515871632,0,2.06271086496374,1.70219802876894,2.34079422240703,2.45781499187234,1.50035924522115,0.709360934569094,2.14042581122485,1.97458824722545,0.304464949114599,3.28540391289194,4.87213762986786,0.882113592219848,0.98931751764888,2.09903754704677,1.62844897306021,1.19372344003136,0.984845398470368,1.1659233465194,9.08583979851498,0.512612642393558,3.50857675537478,1.11116716421827,1.69531611304222,0.956859594047176,1.14389086603261,0.169978429993855,0.69975726161829,0.690999869022119,0,3.00519193902079,2.03319467126849,1.62008011232702,2.29997125615916,1.09181281873089,0.674321731924103,1.23980183588004,1.04702376793612,1.03691978633434,0.621339313086926,11.2738587736838,3.73791365109947,3.30916980914195,3.88902376688095,2.84151611651008,3.04121025883401,2.816573727498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| |||
|short_description=p3@Tmem41b | |||
}} |
Revision as of 00:53, 4 August 2015
Short description: | p3@Tmem41b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Tmem41b_5end |
Coexpression cluster: | NA |
Association with transcript: | -24bp_to_uc009jep.1, uc009jeq.1_5end |
EntrezGene: | 233724 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.57e-20 | 44 |
neurectodermal cell | 1.57e-20 | 44 |
neural cell | 3.66e-20 | 43 |
electrically responsive cell | 1.85e-18 | 39 |
electrically active cell | 1.85e-18 | 39 |
neuron | 1.42e-17 | 33 |
neuronal stem cell | 1.42e-17 | 33 |
neuroblast | 1.42e-17 | 33 |
electrically signaling cell | 1.42e-17 | 33 |
CNS neuron (sensu Vertebrata) | 1.18e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.18e-13 | 23 |
embryonic cell | 3.53e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.66e-25 | 75 |
central nervous system | 5.18e-24 | 73 |
ectoderm-derived structure | 3.98e-22 | 95 |
ectoderm | 3.98e-22 | 95 |
presumptive ectoderm | 3.98e-22 | 95 |
structure with developmental contribution from neural crest | 4.40e-19 | 92 |
neurectoderm | 2.54e-17 | 64 |
neural plate | 2.54e-17 | 64 |
presumptive neural plate | 2.54e-17 | 64 |
regional part of nervous system | 1.20e-15 | 54 |
neural tube | 1.60e-14 | 52 |
neural rod | 1.60e-14 | 52 |
future spinal cord | 1.60e-14 | 52 |
neural keel | 1.60e-14 | 52 |
ecto-epithelium | 3.05e-14 | 73 |
gray matter | 2.11e-13 | 34 |
brain | 6.63e-12 | 47 |
future brain | 6.63e-12 | 47 |
regional part of brain | 2.15e-11 | 46 |
pre-chordal neural plate | 6.54e-11 | 49 |
brain grey matter | 7.92e-11 | 29 |
regional part of telencephalon | 7.92e-11 | 29 |
telencephalon | 7.92e-11 | 29 |
anterior neural tube | 2.04e-09 | 40 |
regional part of forebrain | 4.91e-09 | 39 |
forebrain | 4.91e-09 | 39 |
future forebrain | 4.91e-09 | 39 |
tube | 5.91e-07 | 114 |
cerebral cortex | 8.92e-07 | 21 |
cerebral hemisphere | 8.92e-07 | 21 |
pallium | 8.92e-07 | 21 |