FFCP PHASE1:Mm9::chr2:136539276..136539292,+: Difference between revisions
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{{FFCP|EntrezGene=20614|HGNC=|MCL_coexpression_id=1|UniProt=P60879|association_with_transcript=62bp_to_ENSMUST00000110098_5end|description=CAGE_peak_3_at_Snap25_5end|id=chr2:136539276..136539292,+|ontology_enrichment_celltype=CL:0000540!1.48e-12!33;CL:0000047!1.48e-12!33;CL:0000031!1.48e-12!33;CL:0000404!1.48e-12!33;CL:0000117!9.06e-11!23;CL:0000337!9.06e-11!23;CL:0000393!1.22e-08!39;CL:0000211!1.22e-08!39;CL:0000221!4.49e-08!44;CL:0000133!4.49e-08!44;CL:0002319!7.57e-08!43|ontology_enrichment_celltype_v019_2=CL:0000540,1.33e-13,33;CL:0000047,1.33e-13,33;CL:0000031,1.33e-13,33;CL:0000404,1.33e-13,33;CL:0000117,3.84e-12,23;CL:0000337,3.84e-12,23;CL:0000393,7.52e-10,39;CL:0000211,7.52e-10,39;CL:0000221,2.26e-09,44;CL:0000133,2.26e-09,44;CL:0002319,4.15e-09,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!6.60e-29!71;UBERON:0003075!6.60e-29!71;UBERON:0007284!6.60e-29!71;UBERON:0004121!8.34e-27!102;UBERON:0000924!8.34e-27!102;UBERON:0006601!8.34e-27!102;UBERON:0000073!1.83e-25!75;UBERON:0001016!1.83e-25!75;UBERON:0001017!3.03e-25!73;UBERON:0005743!3.03e-25!73;UBERON:0000033!1.36e-24!63;UBERON:0001049!1.64e-21!52;UBERON:0005068!1.64e-21!52;UBERON:0006241!1.64e-21!52;UBERON:0007135!1.64e-21!52;UBERON:0003056!1.54e-20!49;UBERON:0000955!1.66e-20!50;UBERON:0006238!1.66e-20!50;UBERON:0002616!1.02e-19!49;UBERON:0003080!2.33e-16!40;UBERON:0002020!5.32e-16!34;UBERON:0002780!1.22e-15!39;UBERON:0001890!1.22e-15!39;UBERON:0006240!1.22e-15!39;UBERON:0002791!5.00e-13!29;UBERON:0003528!5.00e-13!29;UBERON:0001893!5.00e-13!29;UBERON:0007811!8.71e-13!86;UBERON:0000153!9.95e-10!94;UBERON:0000956!5.20e-09!21;UBERON:0001869!5.20e-09!21;UBERON:0000203!5.20e-09!21;UBERON:0002021!9.03e-09!10;UBERON:0000411!9.03e-09!10;UBERON:0001950!9.03e-09!10;UBERON:0002619!6.30e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.71e-28,64;UBERON:0003075,5.71e-28,64;UBERON:0007284,5.71e-28,64;UBERON:0001016,2.08e-27,75;UBERON:0001017,3.81e-27,73;UBERON:0004121,3.69e-26,95;UBERON:0000924,3.69e-26,95;UBERON:0006601,3.69e-26,95;UBERON:0000073,2.12e-24,54;UBERON:0010371,9.19e-24,73;UBERON:0001049,7.73e-23,52;UBERON:0005068,7.73e-23,52;UBERON:0006241,7.73e-23,52;UBERON:0007135,7.73e-23,52;UBERON:0003056,8.61e-21,49;UBERON:0000955,2.31e-19,47;UBERON:0006238,2.31e-19,47;UBERON:0010314,3.24e-19,92;UBERON:0002616,1.67e-18,46;UBERON:0002020,1.85e-18,34;UBERON:0003080,1.04e-16,40;UBERON:0002780,6.62e-16,39;UBERON:0001890,6.62e-16,39;UBERON:0006240,6.62e-16,39;UBERON:0003528,4.98e-15,29;UBERON:0002791,4.98e-15,29;UBERON:0001893,4.98e-15,29;UBERON:0000956,2.13e-10,21;UBERON:0001869,2.13e-10,21;UBERON:0000203,2.13e-10,21;UBERON:0002021,7.57e-10,10;UBERON:0000411,7.57e-10,10;UBERON:0001950,7.57e-10,10;UBERON:0002619,3.68e-09,17;UBERON:0003076,8.39e-07,12;UBERON:0003057,8.39e-07,12|phase1_expression=5.60520964866779,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,57.8294373027274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.06949382578793,7.40587370980846,7.60597684207415,0,0,0,0.988866362566974,0,0,0,2.59224030771194,2.97013064329719,2.73422449756797,41.1337417541477,45.4989194360324,3.30725157880376,1.43768206527355,2.75765635983006,179.488886029004,200.469120793745,231.02422601739,4.08847491963601,5.30628332893976,6.77187381723788,163.601237414809,122.682248986906,147.144712609068,75.4249178812589,64.7791147635918,27.4007185363192,1.36307147999731,1.36028808192214,0,0,0,0,0,0,12.2186645514624,0,0,0,3.80277233397037,0,0,0,0,0,0,9.47726201668198,0,8.46120192669501,3.46970653532272,4.87144765299426,2.7673859670727,5.42601505989441,6.23220147819235,0.502666365318702,0,1.01219549843938,0,0.161766849947409,0,0,0,437.707291532263,341.398132105932,0.510914110417183,0,0,0,295.536931545715,286.39537736446,21.8638572676384,380.675261221085,319.132890748253,272.410126417583,212.69829588183,0,0,0,28.1992086887875,0.260240885925407,4.13823787980251,7.56260945182467,12.9606143338715,28.847475640163,29.2099282249457,23.7065363136114,100.635611217477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,258.446346785312,13.2746949969277,0.330418782983798,1.05780226665418,0.426576501070468,1.39342003116263,1.41754207454303,0.80673409849337,2.44615848229357,1.71203063501303,0.474529061544512,1.97638745668813,0.754005626400808,1.79060824837036,1.16978452271472,0.898819408654221,0.864552199498777,1.39398891278057,0.569003702859245,0.456994050438915,0,0,0,0.280543279561274,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,317.247965815877,229.148847287757,0.163934945376675,0,1.26203287766503,1.17131623288992,6.46270193198397,0.238968797952552,1.11399337041197,1.41538265394416,3.23848561339915,7.59865230569411,7.11518000303742,347.990985684817,0,0.178065603667255,0.162886959353576,0,0,0.485561272309963,0,0,0,0,0.775284879504663,0,2.13898427030833,0.632073515871632,0,0,34.3844001811326,0.900305470156551,0.258717367565509,0.643011105094777,2.83744373827638,3.21063871683727,7.40470592709544,3.04464949114599,0,0,5.29268155331909,0,0,0,0,0,1.45740418314925,279.065079525817,0,0,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.406638934253697,1.72808545314882,0.836353184057875,1.09181281873089,2.02296519577231,2.14898984885873,0.785267825952089,0.777689839750757,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0.100966449948148,0.15241361331,0,0,0,0,0.226730383615211,0,0,0,3.28422309854724,0,0,0,0,243.408044167956,199.781152644115,214.262922026334,155.698983203381,335.005352167844,386.006281566137,328.060935112658,351.250538514892,409.640737721721,394.533357554887,1.03787347584177,1.59609949360412,2.56100408631201,2.91728060481953,6.49800804146745,4.41224420280034,5.11167473943715,6.38708677440572,5.45562656306086,5.55933865880354,7.85785829659743,6.41329560712659,5.15028291084353,6.14641463086745,5.57124048869449,4.76293691283074,5.67833197129792,5.78727661391115,5.76920261124629,5.4463600449727,4.80016953339582,5.6792257970988,3.57654284920981,5.0871245821315,5.92889096616583,6.00763716030903,7.3171189149109,4.99832451731901,5.83957689537206,7.2948495315506,4.1522256343461,4.53120618927592,4.91077251803627,4.49316839439301,3.08650577569826,4.49659040288303,4.67863216890817,3.43793686477277,4.20834330551455,4.41182838239031,6.26043156175138|short_description=p3@Snap25}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20614 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P60879 | |||
|association_with_transcript=62bp_to_ENSMUST00000110098_5end | |||
|cluster_id=chr2:136539276..136539292,+ | |||
|description=CAGE_peak_3_at_Snap25_5end | |||
|id=chr2:136539276..136539292,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.48e-12!33;CL:0000047!1.48e-12!33;CL:0000031!1.48e-12!33;CL:0000404!1.48e-12!33;CL:0000117!9.06e-11!23;CL:0000337!9.06e-11!23;CL:0000393!1.22e-08!39;CL:0000211!1.22e-08!39;CL:0000221!4.49e-08!44;CL:0000133!4.49e-08!44;CL:0002319!7.57e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.33e-13,33;CL:0000047,1.33e-13,33;CL:0000031,1.33e-13,33;CL:0000404,1.33e-13,33;CL:0000117,3.84e-12,23;CL:0000337,3.84e-12,23;CL:0000393,7.52e-10,39;CL:0000211,7.52e-10,39;CL:0000221,2.26e-09,44;CL:0000133,2.26e-09,44;CL:0002319,4.15e-09,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!6.60e-29!71;UBERON:0003075!6.60e-29!71;UBERON:0007284!6.60e-29!71;UBERON:0004121!8.34e-27!102;UBERON:0000924!8.34e-27!102;UBERON:0006601!8.34e-27!102;UBERON:0000073!1.83e-25!75;UBERON:0001016!1.83e-25!75;UBERON:0001017!3.03e-25!73;UBERON:0005743!3.03e-25!73;UBERON:0000033!1.36e-24!63;UBERON:0001049!1.64e-21!52;UBERON:0005068!1.64e-21!52;UBERON:0006241!1.64e-21!52;UBERON:0007135!1.64e-21!52;UBERON:0003056!1.54e-20!49;UBERON:0000955!1.66e-20!50;UBERON:0006238!1.66e-20!50;UBERON:0002616!1.02e-19!49;UBERON:0003080!2.33e-16!40;UBERON:0002020!5.32e-16!34;UBERON:0002780!1.22e-15!39;UBERON:0001890!1.22e-15!39;UBERON:0006240!1.22e-15!39;UBERON:0002791!5.00e-13!29;UBERON:0003528!5.00e-13!29;UBERON:0001893!5.00e-13!29;UBERON:0007811!8.71e-13!86;UBERON:0000153!9.95e-10!94;UBERON:0000956!5.20e-09!21;UBERON:0001869!5.20e-09!21;UBERON:0000203!5.20e-09!21;UBERON:0002021!9.03e-09!10;UBERON:0000411!9.03e-09!10;UBERON:0001950!9.03e-09!10;UBERON:0002619!6.30e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.71e-28,64;UBERON:0003075,5.71e-28,64;UBERON:0007284,5.71e-28,64;UBERON:0001016,2.08e-27,75;UBERON:0001017,3.81e-27,73;UBERON:0004121,3.69e-26,95;UBERON:0000924,3.69e-26,95;UBERON:0006601,3.69e-26,95;UBERON:0000073,2.12e-24,54;UBERON:0010371,9.19e-24,73;UBERON:0001049,7.73e-23,52;UBERON:0005068,7.73e-23,52;UBERON:0006241,7.73e-23,52;UBERON:0007135,7.73e-23,52;UBERON:0003056,8.61e-21,49;UBERON:0000955,2.31e-19,47;UBERON:0006238,2.31e-19,47;UBERON:0010314,3.24e-19,92;UBERON:0002616,1.67e-18,46;UBERON:0002020,1.85e-18,34;UBERON:0003080,1.04e-16,40;UBERON:0002780,6.62e-16,39;UBERON:0001890,6.62e-16,39;UBERON:0006240,6.62e-16,39;UBERON:0003528,4.98e-15,29;UBERON:0002791,4.98e-15,29;UBERON:0001893,4.98e-15,29;UBERON:0000956,2.13e-10,21;UBERON:0001869,2.13e-10,21;UBERON:0000203,2.13e-10,21;UBERON:0002021,7.57e-10,10;UBERON:0000411,7.57e-10,10;UBERON:0001950,7.57e-10,10;UBERON:0002619,3.68e-09,17;UBERON:0003076,8.39e-07,12;UBERON:0003057,8.39e-07,12 | |||
|phase1_expression=5.60520964866779,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,57.8294373027274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.06949382578793,7.40587370980846,7.60597684207415,0,0,0,0.988866362566974,0,0,0,2.59224030771194,2.97013064329719,2.73422449756797,41.1337417541477,45.4989194360324,3.30725157880376,1.43768206527355,2.75765635983006,179.488886029004,200.469120793745,231.02422601739,4.08847491963601,5.30628332893976,6.77187381723788,163.601237414809,122.682248986906,147.144712609068,75.4249178812589,64.7791147635918,27.4007185363192,1.36307147999731,1.36028808192214,0,0,0,0,0,0,12.2186645514624,0,0,0,3.80277233397037,0,0,0,0,0,0,9.47726201668198,0,8.46120192669501,3.46970653532272,4.87144765299426,2.7673859670727,5.42601505989441,6.23220147819235,0.502666365318702,0,1.01219549843938,0,0.161766849947409,0,0,0,437.707291532263,341.398132105932,0.510914110417183,0,0,0,295.536931545715,286.39537736446,21.8638572676384,380.675261221085,319.132890748253,272.410126417583,212.69829588183,0,0,0,28.1992086887875,0.260240885925407,4.13823787980251,7.56260945182467,12.9606143338715,28.847475640163,29.2099282249457,23.7065363136114,100.635611217477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,258.446346785312,13.2746949969277,0.330418782983798,1.05780226665418,0.426576501070468,1.39342003116263,1.41754207454303,0.80673409849337,2.44615848229357,1.71203063501303,0.474529061544512,1.97638745668813,0.754005626400808,1.79060824837036,1.16978452271472,0.898819408654221,0.864552199498777,1.39398891278057,0.569003702859245,0.456994050438915,0,0,0,0.280543279561274,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,317.247965815877,229.148847287757,0.163934945376675,0,1.26203287766503,1.17131623288992,6.46270193198397,0.238968797952552,1.11399337041197,1.41538265394416,3.23848561339915,7.59865230569411,7.11518000303742,347.990985684817,0,0.178065603667255,0.162886959353576,0,0,0.485561272309963,0,0,0,0,0.775284879504663,0,2.13898427030833,0.632073515871632,0,0,34.3844001811326,0.900305470156551,0.258717367565509,0.643011105094777,2.83744373827638,3.21063871683727,7.40470592709544,3.04464949114599,0,0,5.29268155331909,0,0,0,0,0,1.45740418314925,279.065079525817,0,0,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.406638934253697,1.72808545314882,0.836353184057875,1.09181281873089,2.02296519577231,2.14898984885873,0.785267825952089,0.777689839750757,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0.100966449948148,0.15241361331,0,0,0,0,0.226730383615211,0,0,0,3.28422309854724,0,0,0,0,243.408044167956,199.781152644115,214.262922026334,155.698983203381,335.005352167844,386.006281566137,328.060935112658,351.250538514892,409.640737721721,394.533357554887,1.03787347584177,1.59609949360412,2.56100408631201,2.91728060481953,6.49800804146745,4.41224420280034,5.11167473943715,6.38708677440572,5.45562656306086,5.55933865880354,7.85785829659743,6.41329560712659,5.15028291084353,6.14641463086745,5.57124048869449,4.76293691283074,5.67833197129792,5.78727661391115,5.76920261124629,5.4463600449727,4.80016953339582,5.6792257970988,3.57654284920981,5.0871245821315,5.92889096616583,6.00763716030903,7.3171189149109,4.99832451731901,5.83957689537206,7.2948495315506,4.1522256343461,4.53120618927592,4.91077251803627,4.49316839439301,3.08650577569826,4.49659040288303,4.67863216890817,3.43793686477277,4.20834330551455,4.41182838239031,6.26043156175138 | |||
|short_description=p3@Snap25 | |||
}} |
Revision as of 03:42, 4 August 2015
Short description: | p3@Snap25 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Snap25_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 62bp_to_ENSMUST00000110098_5end |
EntrezGene: | 20614 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.33e-13 | 33 |
neuronal stem cell | 1.33e-13 | 33 |
neuroblast | 1.33e-13 | 33 |
electrically signaling cell | 1.33e-13 | 33 |
CNS neuron (sensu Vertebrata) | 3.84e-12 | 23 |
neuroblast (sensu Vertebrata) | 3.84e-12 | 23 |
electrically responsive cell | 7.52e-10 | 39 |
electrically active cell | 7.52e-10 | 39 |
ectodermal cell | 2.26e-09 | 44 |
neurectodermal cell | 2.26e-09 | 44 |
neural cell | 4.15e-09 | 43 |