FFCP PHASE1:Mm9::chr8:96334890..96334907,+: Difference between revisions
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{{FFCP|EntrezGene=14681|HGNC=|MCL_coexpression_id=1|UniProt=P18872|association_with_transcript=150bp_to_ENSMUST00000125716_5end|description=CAGE_peak_5_at_Gnao1_5end|id=chr8:96334890..96334907,+|ontology_enrichment_celltype=CL:0002319!2.77e-13!43;CL:0000117!4.39e-13!23;CL:0000337!4.39e-13!23;CL:0000221!1.58e-12!44;CL:0000133!1.58e-12!44;CL:0000540!1.68e-10!33;CL:0000047!1.68e-10!33;CL:0000031!1.68e-10!33;CL:0000404!1.68e-10!33;CL:0000055!1.91e-10!50;CL:0000393!2.46e-08!39;CL:0000211!2.46e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.98e-18,23;CL:0000337,1.98e-18,23;CL:0002319,3.69e-16,43;CL:0000221,1.57e-15,44;CL:0000133,1.57e-15,44;CL:0000540,1.11e-13,33;CL:0000047,1.11e-13,33;CL:0000031,1.11e-13,33;CL:0000404,1.11e-13,33;CL:0000393,3.18e-10,39;CL:0000211,3.18e-10,39;CL:0002321,5.89e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.71e-32!73;UBERON:0005743!3.71e-32!73;UBERON:0000073!1.25e-31!75;UBERON:0001016!1.25e-31!75;UBERON:0001049!3.56e-28!52;UBERON:0005068!3.56e-28!52;UBERON:0006241!3.56e-28!52;UBERON:0007135!3.56e-28!52;UBERON:0000955!3.04e-27!50;UBERON:0006238!3.04e-27!50;UBERON:0002616!1.45e-26!49;UBERON:0002346!1.80e-25!71;UBERON:0003075!1.80e-25!71;UBERON:0007284!1.80e-25!71;UBERON:0004121!4.47e-24!102;UBERON:0000924!4.47e-24!102;UBERON:0006601!4.47e-24!102;UBERON:0000033!4.84e-24!63;UBERON:0003080!5.40e-21!40;UBERON:0002020!8.20e-21!34;UBERON:0003056!1.81e-20!49;UBERON:0002780!2.43e-20!39;UBERON:0001890!2.43e-20!39;UBERON:0006240!2.43e-20!39;UBERON:0002791!9.10e-18!29;UBERON:0003528!9.10e-18!29;UBERON:0001893!9.10e-18!29;UBERON:0000956!1.30e-13!21;UBERON:0001869!1.30e-13!21;UBERON:0000203!1.30e-13!21;UBERON:0007811!2.99e-13!86;UBERON:0002619!9.40e-12!17;UBERON:0000153!5.46e-10!94;UBERON:0002021!2.26e-08!10;UBERON:0000411!2.26e-08!10;UBERON:0001950!2.26e-08!10;UBERON:0000025!2.55e-08!114;UBERON:0004111!3.80e-08!122;UBERON:0003076!1.29e-07!12;UBERON:0003057!1.29e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.82e-43,73;UBERON:0001016,3.98e-41,75;UBERON:0000073,1.25e-40,54;UBERON:0001049,3.87e-38,52;UBERON:0005068,3.87e-38,52;UBERON:0006241,3.87e-38,52;UBERON:0007135,3.87e-38,52;UBERON:0002346,3.34e-34,64;UBERON:0003075,3.34e-34,64;UBERON:0007284,3.34e-34,64;UBERON:0000955,2.31e-33,47;UBERON:0006238,2.31e-33,47;UBERON:0002616,2.12e-32,46;UBERON:0004121,2.90e-32,95;UBERON:0000924,2.90e-32,95;UBERON:0006601,2.90e-32,95;UBERON:0002020,8.98e-30,34;UBERON:0003080,1.01e-28,40;UBERON:0002780,9.05e-28,39;UBERON:0001890,9.05e-28,39;UBERON:0006240,9.05e-28,39;UBERON:0010371,1.62e-27,73;UBERON:0003056,5.10e-26,49;UBERON:0003528,2.67e-25,29;UBERON:0002791,2.67e-25,29;UBERON:0001893,2.67e-25,29;UBERON:0000956,3.33e-19,21;UBERON:0001869,3.33e-19,21;UBERON:0000203,3.33e-19,21;UBERON:0010314,7.15e-18,92;UBERON:0002619,1.76e-16,17;UBERON:0000025,4.68e-12,114;UBERON:0002021,1.56e-11,10;UBERON:0000411,1.56e-11,10;UBERON:0001950,1.56e-11,10;UBERON:0004111,2.61e-11,122;UBERON:0011216,5.60e-10,194;UBERON:0003076,2.03e-09,12;UBERON:0003057,2.03e-09,12;UBERON:0002420,3.36e-07,8;UBERON:0007245,3.36e-07,8;UBERON:0010009,3.36e-07,8;UBERON:0010011,3.36e-07,8;UBERON:0000454,3.36e-07,8|phase1_expression=0.320297694209588,0,0,0,0,0.503637815735669,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,4.93251082876205,0,0,0,0,0,0,0,0,0.756090389279792,0,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0.304130793658544,0.183546752161682,0.782391344348039,10.9012578190223,9.00713349211335,11.8602238435313,3.77963338388479,2.87505128729943,0,0,0,0.257259436035947,0,0.515672092277442,4.24864567805155,8.46385566835253,3.80298842103708,0.338844532069132,0.889294796111139,0,0,0,2.39680088414724,3.45796474789399,3.42175720617976,5.94026128659439,3.15487442027073,11.7116903605559,12.3686382932904,3.55223317723367,4.50473713785711,9.19218786610021,37.4393995397922,20.1745994174597,22.4265538554115,5.67111037239834,6.95306091378313,1.04182674111352,18.9844439320939,17.4456409109821,18.488587980994,18.8562294703147,12.6710795911202,7.64237727883732,0.37863096666592,0.377857800533928,0,0,0,0,0,0,0.702222100658759,0.852151612890289,1.03914401841148,0.70667914902068,0,3.84979432242953,7.64415719119937,7.11066703153331,0,0,0,0.79928715803342,0,0.445326417194474,0.346970653532272,0.913396434936424,0.691846491768175,0.452167921657868,0.940709657085638,0.376999773989026,0,0.289198713839823,0,0,0,0,0,27.2286141220739,16.7557365450764,1.27728527604296,0,0,0,15.5782264981016,21.9600289352941,5.15182843662744,19.8159725019195,11.5071955798649,25.1423533917068,11.5191296778108,0,0.248813941220186,0,1.68353484709179,0.390361328888111,0.459804208866946,0,0.30140963567143,1.49680298132921,0.896796041993948,1.40552586839593,7.76110112217047,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0.414251545071004,0,0.180062061461015,0.473489471170421,0,0.154267112887378,0,0.804820204198858,0.116765342367169,0.16455984991348,0.32833492815819,0.405344047729279,0.438599962275997,0.65865034587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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14681 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P18872 | |||
|association_with_transcript=150bp_to_ENSMUST00000125716_5end | |||
|cluster_id=chr8:96334890..96334907,+ | |||
|description=CAGE_peak_5_at_Gnao1_5end | |||
|id=chr8:96334890..96334907,+ | |||
|ontology_enrichment_celltype=CL:0002319!2.77e-13!43;CL:0000117!4.39e-13!23;CL:0000337!4.39e-13!23;CL:0000221!1.58e-12!44;CL:0000133!1.58e-12!44;CL:0000540!1.68e-10!33;CL:0000047!1.68e-10!33;CL:0000031!1.68e-10!33;CL:0000404!1.68e-10!33;CL:0000055!1.91e-10!50;CL:0000393!2.46e-08!39;CL:0000211!2.46e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.98e-18,23;CL:0000337,1.98e-18,23;CL:0002319,3.69e-16,43;CL:0000221,1.57e-15,44;CL:0000133,1.57e-15,44;CL:0000540,1.11e-13,33;CL:0000047,1.11e-13,33;CL:0000031,1.11e-13,33;CL:0000404,1.11e-13,33;CL:0000393,3.18e-10,39;CL:0000211,3.18e-10,39;CL:0002321,5.89e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.71e-32!73;UBERON:0005743!3.71e-32!73;UBERON:0000073!1.25e-31!75;UBERON:0001016!1.25e-31!75;UBERON:0001049!3.56e-28!52;UBERON:0005068!3.56e-28!52;UBERON:0006241!3.56e-28!52;UBERON:0007135!3.56e-28!52;UBERON:0000955!3.04e-27!50;UBERON:0006238!3.04e-27!50;UBERON:0002616!1.45e-26!49;UBERON:0002346!1.80e-25!71;UBERON:0003075!1.80e-25!71;UBERON:0007284!1.80e-25!71;UBERON:0004121!4.47e-24!102;UBERON:0000924!4.47e-24!102;UBERON:0006601!4.47e-24!102;UBERON:0000033!4.84e-24!63;UBERON:0003080!5.40e-21!40;UBERON:0002020!8.20e-21!34;UBERON:0003056!1.81e-20!49;UBERON:0002780!2.43e-20!39;UBERON:0001890!2.43e-20!39;UBERON:0006240!2.43e-20!39;UBERON:0002791!9.10e-18!29;UBERON:0003528!9.10e-18!29;UBERON:0001893!9.10e-18!29;UBERON:0000956!1.30e-13!21;UBERON:0001869!1.30e-13!21;UBERON:0000203!1.30e-13!21;UBERON:0007811!2.99e-13!86;UBERON:0002619!9.40e-12!17;UBERON:0000153!5.46e-10!94;UBERON:0002021!2.26e-08!10;UBERON:0000411!2.26e-08!10;UBERON:0001950!2.26e-08!10;UBERON:0000025!2.55e-08!114;UBERON:0004111!3.80e-08!122;UBERON:0003076!1.29e-07!12;UBERON:0003057!1.29e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.82e-43,73;UBERON:0001016,3.98e-41,75;UBERON:0000073,1.25e-40,54;UBERON:0001049,3.87e-38,52;UBERON:0005068,3.87e-38,52;UBERON:0006241,3.87e-38,52;UBERON:0007135,3.87e-38,52;UBERON:0002346,3.34e-34,64;UBERON:0003075,3.34e-34,64;UBERON:0007284,3.34e-34,64;UBERON:0000955,2.31e-33,47;UBERON:0006238,2.31e-33,47;UBERON:0002616,2.12e-32,46;UBERON:0004121,2.90e-32,95;UBERON:0000924,2.90e-32,95;UBERON:0006601,2.90e-32,95;UBERON:0002020,8.98e-30,34;UBERON:0003080,1.01e-28,40;UBERON:0002780,9.05e-28,39;UBERON:0001890,9.05e-28,39;UBERON:0006240,9.05e-28,39;UBERON:0010371,1.62e-27,73;UBERON:0003056,5.10e-26,49;UBERON:0003528,2.67e-25,29;UBERON:0002791,2.67e-25,29;UBERON:0001893,2.67e-25,29;UBERON:0000956,3.33e-19,21;UBERON:0001869,3.33e-19,21;UBERON:0000203,3.33e-19,21;UBERON:0010314,7.15e-18,92;UBERON:0002619,1.76e-16,17;UBERON:0000025,4.68e-12,114;UBERON:0002021,1.56e-11,10;UBERON:0000411,1.56e-11,10;UBERON:0001950,1.56e-11,10;UBERON:0004111,2.61e-11,122;UBERON:0011216,5.60e-10,194;UBERON:0003076,2.03e-09,12;UBERON:0003057,2.03e-09,12;UBERON:0002420,3.36e-07,8;UBERON:0007245,3.36e-07,8;UBERON:0010009,3.36e-07,8;UBERON:0010011,3.36e-07,8;UBERON:0000454,3.36e-07,8 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0.503637815735669,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,4.93251082876205,0,0,0,0,0,0,0,0,0.756090389279792,0,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0.304130793658544,0.183546752161682,0.782391344348039,10.9012578190223,9.00713349211335,11.8602238435313,3.77963338388479,2.87505128729943,0,0,0,0.257259436035947,0,0.515672092277442,4.24864567805155,8.46385566835253,3.80298842103708,0.338844532069132,0.889294796111139,0,0,0,2.39680088414724,3.45796474789399,3.42175720617976,5.94026128659439,3.15487442027073,11.7116903605559,12.3686382932904,3.55223317723367,4.50473713785711,9.19218786610021,37.4393995397922,20.1745994174597,22.4265538554115,5.67111037239834,6.95306091378313,1.04182674111352,18.9844439320939,17.4456409109821,18.488587980994,18.8562294703147,12.6710795911202,7.64237727883732,0.37863096666592,0.377857800533928,0,0,0,0,0,0,0.702222100658759,0.852151612890289,1.03914401841148,0.70667914902068,0,3.84979432242953,7.64415719119937,7.11066703153331,0,0,0,0.79928715803342,0,0.445326417194474,0.346970653532272,0.913396434936424,0.691846491768175,0.452167921657868,0.940709657085638,0.376999773989026,0,0.289198713839823,0,0,0,0,0,27.2286141220739,16.7557365450764,1.27728527604296,0,0,0,15.5782264981016,21.9600289352941,5.15182843662744,19.8159725019195,11.5071955798649,25.1423533917068,11.5191296778108,0,0.248813941220186,0,1.68353484709179,0.390361328888111,0.459804208866946,0,0.30140963567143,1.49680298132921,0.896796041993948,1.40552586839593,7.76110112217047,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0.414251545071004,0,0.180062061461015,0.473489471170421,0,0.154267112887378,0,0.804820204198858,0.116765342367169,0.16455984991348,0.32833492815819,0.405344047729279,0.438599962275997,0.658650345873152,0.268412837520744,21.449574753541,3.39585220851639,0,0.264450566663544,0.426576501070468,0,0.644337306610467,0.403367049246685,0.444756087689741,0,0.949058123089023,0.988193728344065,0.502670417600539,0.596869416123452,1.55971269695296,0.898819408654221,0.864552199498777,0.597423819763102,0,0.456994050438915,0,0,0.193952487167626,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21703828199926,0.189491411770485,0.162964976442026,0,0.234690248288502,0,0.952174563544055,0.780534591431195,1.57635144106191,1.10732344824387,1.43509291791738,2.29408640602033,1.20879487306127,2.16973587872267,0,0,0,0,11.2385412991454,11.4867452860359,0.655739781506702,0,0,0,1.72338718186239,0.716906393857656,0,0.283076530788832,0.809621403349789,2.63030272120181,3.16230222357219,12.8528526568723,0,0,0.162886959353576,0.494910368917606,2.65490276679926,2.91336763385978,1.81394134178851,1.32023555829129,1.77181135728464,2.76691633149535,2.58428293168221,1.45413491791002,0.356497378384721,0.632073515871632,0,0,7.14923172082955,0.36012218806262,0.517434735131018,1.07168517515796,2.12808280370728,2.31879462882692,1.15184314421485,3.65357938937519,0.938686832254841,0,0.882113592219848,0,0.161464426695906,0,0,0,1.45740418314925,15.0194494628513,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.609958401380546,0.648032044930808,0,0.436725127492355,0.944050424693745,0.247960367176008,1.04702376793612,0.777689839750757,0,0.56369293868419,0,0,0,0.129159823477731,0,0,0,0,0.483168241652012,0.576060012515731,0,0.608175645870493,0.718976700153791,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0.221985953374065,0.179427713218951,0.335769232728157,4.25017106870819,0.187682475451182,0,0.214368379079066,1.00314420807073,18.0720589637461,19.3336599333014,25.2074025913335,23.3720327987415,26.718218271055,30.9711497929777,26.3258775090404,19.8141329418657,24.0165476761628,23.8169743405837,0.207574695168353,0,0.341467211508268,0.972426868273176,0.419226325255965,1.10306105070008,0.888986911206461,1.64828045791115,1.28367683836726,0.758091635291392,0.760437899670719,0.754505365544305,1.21733959710847,1.08842759088278,0.976402972245426,0,0.811190281613988,1.54327376370964,0,1.17759136107518,0.685738504770831,1.77475806159337,0.715308569841963,1.59881058295561,1.41164070622996,0.930760686808441,0.548783918618318,0.526139422875686,1.35804113845862,1.12228454331548,1.06771516311757,0.689531376628944,0.818462086339379,0.309873682371932,0.964533054905707,3.49734809113124,1.16965804222704,1.07435527024149,0.765153328275374,0.441182838239031,0.927471342481686 | |||
|short_description=p5@Gnao1 | |||
}} |
Revision as of 08:48, 4 August 2015
Short description: | p5@Gnao1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Gnao1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 150bp_to_ENSMUST00000125716_5end |
EntrezGene: | 14681 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.98e-18 | 23 |
neuroblast (sensu Vertebrata) | 1.98e-18 | 23 |
neural cell | 3.69e-16 | 43 |
ectodermal cell | 1.57e-15 | 44 |
neurectodermal cell | 1.57e-15 | 44 |
neuron | 1.11e-13 | 33 |
neuronal stem cell | 1.11e-13 | 33 |
neuroblast | 1.11e-13 | 33 |
electrically signaling cell | 1.11e-13 | 33 |
electrically responsive cell | 3.18e-10 | 39 |
electrically active cell | 3.18e-10 | 39 |
embryonic cell | 5.89e-08 | 70 |