FFCP PHASE1:Mm9::chr8:98202130..98202159,+: Difference between revisions
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{{FFCP|EntrezGene=234593|HGNC=|MCL_coexpression_id=360|UniProt=E9Q168|association_with_transcript=0bp_to_ENSMUST00000166358_5end|description=CAGE_peak_4_at_Ndrg4_5end|id=chr8:98202130..98202159,+|ontology_enrichment_celltype=CL:0000117!6.48e-15!23;CL:0000337!6.48e-15!23;CL:0000540!5.04e-08!33;CL:0000047!5.04e-08!33;CL:0000031!5.04e-08!33;CL:0000404!5.04e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,3.43e-25,23;CL:0000337,3.43e-25,23;CL:0000540,1.35e-15,33;CL:0000047,1.35e-15,33;CL:0000031,1.35e-15,33;CL:0000404,1.35e-15,33;CL:0000393,3.03e-12,39;CL:0000211,3.03e-12,39;CL:0002319,1.51e-10,43;CL:0000221,3.56e-10,44;CL:0000133,3.56e-10,44;CL:0002609,1.79e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!6.66e-24!52;UBERON:0005068!6.66e-24!52;UBERON:0006241!6.66e-24!52;UBERON:0007135!6.66e-24!52;UBERON:0000955!4.54e-23!50;UBERON:0006238!4.54e-23!50;UBERON:0002616!3.42e-22!49;UBERON:0000033!1.16e-21!63;UBERON:0000073!4.37e-21!75;UBERON:0001016!4.37e-21!75;UBERON:0001017!2.29e-20!73;UBERON:0005743!2.29e-20!73;UBERON:0002020!3.24e-20!34;UBERON:0002346!3.13e-19!71;UBERON:0003075!3.13e-19!71;UBERON:0007284!3.13e-19!71;UBERON:0003080!3.71e-19!40;UBERON:0003056!9.52e-19!49;UBERON:0002780!1.86e-18!39;UBERON:0001890!1.86e-18!39;UBERON:0006240!1.86e-18!39;UBERON:0002791!6.07e-17!29;UBERON:0003528!6.07e-17!29;UBERON:0001893!6.07e-17!29;UBERON:0004121!2.05e-16!102;UBERON:0000924!2.05e-16!102;UBERON:0006601!2.05e-16!102;UBERON:0007811!6.51e-14!86;UBERON:0000956!4.95e-12!21;UBERON:0001869!4.95e-12!21;UBERON:0000203!4.95e-12!21;UBERON:0000153!9.52e-12!94;UBERON:0002619!1.33e-09!17;UBERON:0000025!1.41e-09!114;UBERON:0004111!3.18e-09!122;UBERON:0002021!4.60e-09!10;UBERON:0000411!4.60e-09!10;UBERON:0001950!4.60e-09!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.73e-39,54;UBERON:0002020,1.04e-36,34;UBERON:0001049,4.76e-36,52;UBERON:0005068,4.76e-36,52;UBERON:0006241,4.76e-36,52;UBERON:0007135,4.76e-36,52;UBERON:0001017,1.71e-34,73;UBERON:0001016,3.19e-33,75;UBERON:0003528,1.82e-30,29;UBERON:0002791,1.82e-30,29;UBERON:0001893,1.82e-30,29;UBERON:0000955,2.80e-30,47;UBERON:0006238,2.80e-30,47;UBERON:0002616,9.13e-29,46;UBERON:0002346,1.12e-28,64;UBERON:0003075,1.12e-28,64;UBERON:0007284,1.12e-28,64;UBERON:0003080,4.86e-26,40;UBERON:0002780,8.32e-25,39;UBERON:0001890,8.32e-25,39;UBERON:0006240,8.32e-25,39;UBERON:0004121,1.00e-24,95;UBERON:0000924,1.00e-24,95;UBERON:0006601,1.00e-24,95;UBERON:0010371,1.07e-23,73;UBERON:0010314,5.27e-23,92;UBERON:0000956,8.80e-23,21;UBERON:0001869,8.80e-23,21;UBERON:0000203,8.80e-23,21;UBERON:0003056,4.30e-21,49;UBERON:0002619,3.96e-18,17;UBERON:0000025,3.50e-16,114;UBERON:0002021,8.35e-16,10;UBERON:0000411,8.35e-16,10;UBERON:0001950,8.35e-16,10;UBERON:0004111,2.64e-14,122;UBERON:0003076,4.22e-10,12;UBERON:0003057,4.22e-10,12;UBERON:0002420,1.16e-08,8;UBERON:0007245,1.16e-08,8;UBERON:0010009,1.16e-08,8;UBERON:0010011,1.16e-08,8;UBERON:0000454,1.16e-08,8;UBERON:0002240,2.32e-08,6;UBERON:0005174,2.32e-08,6;UBERON:0001137,2.32e-08,6;UBERON:0001948,3.17e-07,5;UBERON:0002315,3.17e-07,5;UBERON:0000483,5.11e-07,174;UBERON:0000119,8.31e-07,176|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.58937230525805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,3.84401275633236,4.7609188134483,5.07065122804943,0,0,0,0,0,0.299600110518405,0,3.21437798156281,4.05017814995072,2.73422449756797,7.42692559449889,5.07997644188711,3.79721477566358,1.53352753629178,7.35375029288017,47.3498288297371,43.0306329347083,30.8749131845049,4.2203612073662,3.11057988248193,0.52091337055676,16.7509799400829,9.56696437053856,12.3766580699216,7.95497180778903,6.69146899755784,6.15118171223492,0.605809546665472,0.68014404096107,0,0,0,0,0,0,2.38755514223978,0,0,0,0.281686839553361,0,0,0,0,0,0,1.59857431606684,0,1.92974780784272,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0.161766849947409,0.220841518460394,0.969750506270444,0,1.75668478206928,1.67557365450764,0,0.11981512450592,0,0.127070227073065,10.6351353977424,93.3301229749998,10.4293112253677,62.229106628835,65.9745879912253,38.6485762880782,54.9997881799698,0.101839363850316,1.7416975885413,4.54900965180614,0.420883711772948,0,0,0.360124259610698,0.452114453507145,0.204109497453984,0.2562274405697,0.374806898238915,1.81092359517311,0,0,0,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0.621377317606506,0.938104239924385,0.900310307305074,1.65721314909647,0.983821158737019,2.1597395804233,1.39520366850245,1.07309360559848,1.28441876603886,0.987359099480883,0.492502392237286,0.0810688095458557,0.146199987425332,0.439100230582101,0.134206418760372,46.0534987355439,3.08713837137853,0,0,0,0,0,0,0,0,0,0.329397909448022,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0.0632365371242573,0.295220295959204,0.470996183524124,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,16.215609588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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:234593 | |||
|HGNC= | |||
|MCL_coexpression_id=360 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9Q168 | |||
|association_with_transcript=0bp_to_ENSMUST00000166358_5end | |||
|cluster_id=chr8:98202130..98202159,+ | |||
|description=CAGE_peak_4_at_Ndrg4_5end | |||
|id=chr8:98202130..98202159,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.48e-15!23;CL:0000337!6.48e-15!23;CL:0000540!5.04e-08!33;CL:0000047!5.04e-08!33;CL:0000031!5.04e-08!33;CL:0000404!5.04e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.43e-25,23;CL:0000337,3.43e-25,23;CL:0000540,1.35e-15,33;CL:0000047,1.35e-15,33;CL:0000031,1.35e-15,33;CL:0000404,1.35e-15,33;CL:0000393,3.03e-12,39;CL:0000211,3.03e-12,39;CL:0002319,1.51e-10,43;CL:0000221,3.56e-10,44;CL:0000133,3.56e-10,44;CL:0002609,1.79e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.66e-24!52;UBERON:0005068!6.66e-24!52;UBERON:0006241!6.66e-24!52;UBERON:0007135!6.66e-24!52;UBERON:0000955!4.54e-23!50;UBERON:0006238!4.54e-23!50;UBERON:0002616!3.42e-22!49;UBERON:0000033!1.16e-21!63;UBERON:0000073!4.37e-21!75;UBERON:0001016!4.37e-21!75;UBERON:0001017!2.29e-20!73;UBERON:0005743!2.29e-20!73;UBERON:0002020!3.24e-20!34;UBERON:0002346!3.13e-19!71;UBERON:0003075!3.13e-19!71;UBERON:0007284!3.13e-19!71;UBERON:0003080!3.71e-19!40;UBERON:0003056!9.52e-19!49;UBERON:0002780!1.86e-18!39;UBERON:0001890!1.86e-18!39;UBERON:0006240!1.86e-18!39;UBERON:0002791!6.07e-17!29;UBERON:0003528!6.07e-17!29;UBERON:0001893!6.07e-17!29;UBERON:0004121!2.05e-16!102;UBERON:0000924!2.05e-16!102;UBERON:0006601!2.05e-16!102;UBERON:0007811!6.51e-14!86;UBERON:0000956!4.95e-12!21;UBERON:0001869!4.95e-12!21;UBERON:0000203!4.95e-12!21;UBERON:0000153!9.52e-12!94;UBERON:0002619!1.33e-09!17;UBERON:0000025!1.41e-09!114;UBERON:0004111!3.18e-09!122;UBERON:0002021!4.60e-09!10;UBERON:0000411!4.60e-09!10;UBERON:0001950!4.60e-09!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.73e-39,54;UBERON:0002020,1.04e-36,34;UBERON:0001049,4.76e-36,52;UBERON:0005068,4.76e-36,52;UBERON:0006241,4.76e-36,52;UBERON:0007135,4.76e-36,52;UBERON:0001017,1.71e-34,73;UBERON:0001016,3.19e-33,75;UBERON:0003528,1.82e-30,29;UBERON:0002791,1.82e-30,29;UBERON:0001893,1.82e-30,29;UBERON:0000955,2.80e-30,47;UBERON:0006238,2.80e-30,47;UBERON:0002616,9.13e-29,46;UBERON:0002346,1.12e-28,64;UBERON:0003075,1.12e-28,64;UBERON:0007284,1.12e-28,64;UBERON:0003080,4.86e-26,40;UBERON:0002780,8.32e-25,39;UBERON:0001890,8.32e-25,39;UBERON:0006240,8.32e-25,39;UBERON:0004121,1.00e-24,95;UBERON:0000924,1.00e-24,95;UBERON:0006601,1.00e-24,95;UBERON:0010371,1.07e-23,73;UBERON:0010314,5.27e-23,92;UBERON:0000956,8.80e-23,21;UBERON:0001869,8.80e-23,21;UBERON:0000203,8.80e-23,21;UBERON:0003056,4.30e-21,49;UBERON:0002619,3.96e-18,17;UBERON:0000025,3.50e-16,114;UBERON:0002021,8.35e-16,10;UBERON:0000411,8.35e-16,10;UBERON:0001950,8.35e-16,10;UBERON:0004111,2.64e-14,122;UBERON:0003076,4.22e-10,12;UBERON:0003057,4.22e-10,12;UBERON:0002420,1.16e-08,8;UBERON:0007245,1.16e-08,8;UBERON:0010009,1.16e-08,8;UBERON:0010011,1.16e-08,8;UBERON:0000454,1.16e-08,8;UBERON:0002240,2.32e-08,6;UBERON:0005174,2.32e-08,6;UBERON:0001137,2.32e-08,6;UBERON:0001948,3.17e-07,5;UBERON:0002315,3.17e-07,5;UBERON:0000483,5.11e-07,174;UBERON:0000119,8.31e-07,176 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.58937230525805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,3.84401275633236,4.7609188134483,5.07065122804943,0,0,0,0,0,0.299600110518405,0,3.21437798156281,4.05017814995072,2.73422449756797,7.42692559449889,5.07997644188711,3.79721477566358,1.53352753629178,7.35375029288017,47.3498288297371,43.0306329347083,30.8749131845049,4.2203612073662,3.11057988248193,0.52091337055676,16.7509799400829,9.56696437053856,12.3766580699216,7.95497180778903,6.69146899755784,6.15118171223492,0.605809546665472,0.68014404096107,0,0,0,0,0,0,2.38755514223978,0,0,0,0.281686839553361,0,0,0,0,0,0,1.59857431606684,0,1.92974780784272,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0.161766849947409,0.220841518460394,0.969750506270444,0,1.75668478206928,1.67557365450764,0,0.11981512450592,0,0.127070227073065,10.6351353977424,93.3301229749998,10.4293112253677,62.229106628835,65.9745879912253,38.6485762880782,54.9997881799698,0.101839363850316,1.7416975885413,4.54900965180614,0.420883711772948,0,0,0.360124259610698,0.452114453507145,0.204109497453984,0.2562274405697,0.374806898238915,1.81092359517311,0,0,0,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0.621377317606506,0.938104239924385,0.900310307305074,1.65721314909647,0.983821158737019,2.1597395804233,1.39520366850245,1.07309360559848,1.28441876603886,0.987359099480883,0.492502392237286,0.0810688095458557,0.146199987425332,0.439100230582101,0.134206418760372,46.0534987355439,3.08713837137853,0,0,0,0,0,0,0,0,0,0.329397909448022,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0.0632365371242573,0.295220295959204,0.470996183524124,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,16.215609588767,12.0728037189969,0,0,0,0,0,0,0,0,0,0,0,115.996995228272,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.388076051348264,0.214337035031592,0.532020700926821,0.356737635204141,0.493647061806363,0.608929898229199,0.23467170806371,0,0.661585194164886,0,0,0.0603129249281559,0.238744688006273,0,0,7.23158677840988,0,0,0,0,0,0,0.339956859987711,0.419854356970974,0.276399947608848,0,0,0,0,0,0,0,0.165306911450672,0,0.129614973291793,0,0,0,0.165458490457098,0.388902376688095,0.387479470433193,0.337912250981556,0,0.2604087696879,0.629156066554265,0,0.288030006257865,0.316011120628178,0,0,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0.100826185136841,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0,0,38.4031252979605,35.4450432110526,38.956894913879,34.8861960157686,44.5303637850917,49.8559972277202,43.2014400148356,49.5353323546642,57.549085940994,56.4358739809484,0.207574695168353,0.399024873401031,0.341467211508268,0.243106717068294,0.838452650511929,1.10306105070008,0.222246727801615,1.23621034343337,1.60459604795908,1.51618327058278,0,0.754505365544305,0.655490552289177,0.960377286073039,0.574354689556133,0.952587382566147,0.927074607558844,0.964546102318525,0.412085900803307,0.441596760403192,0,0.354951612318675,0.238436189947321,0.872078499793971,0.564656282491984,0.676916863133412,0.548783918618318,0,0.407412341537585,0,1.18635018124174,0.591026894253381,0,1.08455788830176,0.964533054905707,2.24829520144151,0.701794825336225,0.859484216193193,0.57386499620653,0.882365676478062,0.695603506861264 | |||
|short_description=p4@Ndrg4 | |||
}} |
Revision as of 10:00, 4 August 2015
Short description: | p4@Ndrg4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ndrg4_5end |
Coexpression cluster: | MCL_coexpression_mm9:360 |
Association with transcript: | 0bp_to_ENSMUST00000166358_5end |
EntrezGene: | 234593 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.43e-25 | 23 |
neuroblast (sensu Vertebrata) | 3.43e-25 | 23 |
neuron | 1.35e-15 | 33 |
neuronal stem cell | 1.35e-15 | 33 |
neuroblast | 1.35e-15 | 33 |
electrically signaling cell | 1.35e-15 | 33 |
electrically responsive cell | 3.03e-12 | 39 |
electrically active cell | 3.03e-12 | 39 |
neural cell | 1.51e-10 | 43 |
ectodermal cell | 3.56e-10 | 44 |
neurectodermal cell | 3.56e-10 | 44 |
neuron of cerebral cortex | 1.79e-07 | 6 |