FFCP PHASE1:Mm9::chr11:97141646..97141721,-: Difference between revisions
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{{FFCP|EntrezGene=19155|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=146bp_to_ENSMUST00000163950_5end|description=CAGE_peak_2_at_Npepps_5end|id=chr11:97141646..97141721,-|ontology_enrichment_celltype=CL:0000393!5.25e-11!39;CL:0000211!5.25e-11!39;CL:0000055!3.21e-10!50;CL:0000540!5.03e-10!33;CL:0000047!5.03e-10!33;CL:0000031!5.03e-10!33;CL:0000404!5.03e-10!33;CL:0000117!6.82e-10!23;CL:0000337!6.82e-10!23;CL:0002319!6.96e-10!43;CL:0000221!8.79e-10!44;CL:0000133!8.79e-10!44|ontology_enrichment_celltype_v019_2=CL:0000393,5.25e-11,39;CL:0000211,5.25e-11,39;CL:0000540,5.03e-10,33;CL:0000047,5.03e-10,33;CL:0000031,5.03e-10,33;CL:0000404,5.03e-10,33;CL:0000117,6.82e-10,23;CL:0000337,6.82e-10,23;CL:0002319,6.96e-10,43;CL:0000221,8.79e-10,44;CL:0000133,8.79e-10,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.76e-26!73;UBERON:0005743!4.76e-26!73;UBERON:0000073!2.42e-24!75;UBERON:0001016!2.42e-24!75;UBERON:0004121!6.13e-23!102;UBERON:0000924!6.13e-23!102;UBERON:0006601!6.13e-23!102;UBERON:0000955!8.08e-21!50;UBERON:0006238!8.08e-21!50;UBERON:0001049!8.89e-21!52;UBERON:0005068!8.89e-21!52;UBERON:0006241!8.89e-21!52;UBERON:0007135!8.89e-21!52;UBERON:0000033!1.09e-20!63;UBERON:0002616!3.63e-20!49;UBERON:0002346!8.84e-19!71;UBERON:0003075!8.84e-19!71;UBERON:0007284!8.84e-19!71;UBERON:0003080!7.55e-16!40;UBERON:0002020!8.83e-16!34;UBERON:0003056!1.86e-15!49;UBERON:0002780!3.20e-15!39;UBERON:0001890!3.20e-15!39;UBERON:0006240!3.20e-15!39;UBERON:0002791!5.83e-14!29;UBERON:0003528!5.83e-14!29;UBERON:0001893!5.83e-14!29;UBERON:0007811!9.48e-12!86;UBERON:0000956!3.36e-10!21;UBERON:0001869!3.36e-10!21;UBERON:0000203!3.36e-10!21;UBERON:0000153!3.43e-10!94;UBERON:0002619!1.85e-09!17;UBERON:0004111!5.87e-07!122;UBERON:0002021!7.30e-07!10;UBERON:0000411!7.30e-07!10;UBERON:0001950!7.30e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.76e-26,73;UBERON:0004121,1.62e-24,95;UBERON:0000924,1.62e-24,95;UBERON:0006601,1.62e-24,95;UBERON:0001016,2.42e-24,75;UBERON:0000073,3.37e-22,54;UBERON:0002346,7.95e-21,64;UBERON:0003075,7.95e-21,64;UBERON:0007284,7.95e-21,64;UBERON:0001049,8.89e-21,52;UBERON:0005068,8.89e-21,52;UBERON:0006241,8.89e-21,52;UBERON:0007135,8.89e-21,52;UBERON:0010371,4.91e-20,73;UBERON:0000955,8.12e-19,47;UBERON:0006238,8.12e-19,47;UBERON:0010314,2.30e-18,92;UBERON:0002616,3.52e-18,46;UBERON:0003080,7.55e-16,40;UBERON:0002020,8.83e-16,34;UBERON:0003056,1.86e-15,49;UBERON:0002780,3.20e-15,39;UBERON:0001890,3.20e-15,39;UBERON:0006240,3.20e-15,39;UBERON:0003528,5.83e-14,29;UBERON:0002791,5.83e-14,29;UBERON:0001893,5.83e-14,29;UBERON:0000956,3.36e-10,21;UBERON:0001869,3.36e-10,21;UBERON:0000203,3.36e-10,21;UBERON:0002619,1.85e-09,17;UBERON:0004111,5.87e-07,122;UBERON:0002021,7.30e-07,10;UBERON:0000411,7.30e-07,10;UBERON:0001950,7.30e-07,10|phase1_expression=8.16759120234449,6.97950815278722,5.91499011206397,8.16653370528441,12.0214975187123,2.68606835059024,3.50418960893289,1.93684985162364,3.51971805379167,4.44722600011788,2.39705155515707,2.15384829287408,1.88320802924326,2.79745287740792,1.66554880907831,1.41732687172878,2.09868563438444,1.41957974411207,1.37114433605739,2.12194825899015,9.69493507722195,3.97163804803541,2.08959831311148,5.11975752938901,2.52350209173887,5.16808767703518,5.1691439539089,4.95583835177545,8.7410772949932,7.56090389279792,3.99114919179548,1.90509202037889,3.07532393792285,0,5.19932915552294,5.65197794218874,4.69589519403449,7.53356935326434,5.4693474116666,9.94695113550217,6.47054636834116,7.5135003345429,6.79714494243615,11.7084040717287,13.3817549209759,9.9115246167308,10.9534788208725,4.79655344036982,15.5977189741475,17.8875507148341,19.7380854491761,7.18762821824858,1.8456086666351,2.90144856804538,5.04140698713696,5.14518872071894,8.88253663810146,9.28209766099396,12.5436205732951,15.869729378161,17.1134478946668,16.2645375393183,18.6751907183339,3.5995988691256,3.9554654502679,2.8419204597844,5.99200221036809,7.30014780110954,9.64313394468842,7.1553147315796,7.99234853135252,11.4260393761521,7.73039893330647,8.94182834269164,8.81778333367775,11.9498442259303,17.6185409599022,21.5791601363967,20.7368819895929,15.2988093767025,14.4550476891807,15.6274011167028,15.0758819460746,15.1945904708554,18.9469827243245,16.7938293719991,14.6642831223076,14.7255562201987,3.25622631332691,3.92972112555285,2.02905142091174,2.58127163094416,3.39985666853875,2.15881276655127,1.94932925234301,5.82434953226536,4.49422144421606,2.89731548382698,2.85764605063156,2.47337702157238,6.33795388995062,5.13305909657271,2.54805239706646,0,4.11332977921307,3.54703811665138,3.53867111510348,5.36664234679582,4.66088190564909,8.01587550950054,3.64319186208885,4.56698217468212,5.5347719341454,3.76806601381556,8.11362079236363,7.03732911446183,9.39340877390621,7.22996784599558,5.30766331169925,7.44127509758082,5.30019644304944,2.42437626567611,1.86391761218122,25.7647101370161,33.9303665037797,12.2619386500124,3.11519323715393,2.399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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:19155 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=146bp_to_ENSMUST00000163950_5end | |||
|cluster_id=chr11:97141646..97141721,- | |||
|description=CAGE_peak_2_at_Npepps_5end | |||
|id=chr11:97141646..97141721,- | |||
|ontology_enrichment_celltype=CL:0000393!5.25e-11!39;CL:0000211!5.25e-11!39;CL:0000055!3.21e-10!50;CL:0000540!5.03e-10!33;CL:0000047!5.03e-10!33;CL:0000031!5.03e-10!33;CL:0000404!5.03e-10!33;CL:0000117!6.82e-10!23;CL:0000337!6.82e-10!23;CL:0002319!6.96e-10!43;CL:0000221!8.79e-10!44;CL:0000133!8.79e-10!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,5.25e-11,39;CL:0000211,5.25e-11,39;CL:0000540,5.03e-10,33;CL:0000047,5.03e-10,33;CL:0000031,5.03e-10,33;CL:0000404,5.03e-10,33;CL:0000117,6.82e-10,23;CL:0000337,6.82e-10,23;CL:0002319,6.96e-10,43;CL:0000221,8.79e-10,44;CL:0000133,8.79e-10,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.76e-26!73;UBERON:0005743!4.76e-26!73;UBERON:0000073!2.42e-24!75;UBERON:0001016!2.42e-24!75;UBERON:0004121!6.13e-23!102;UBERON:0000924!6.13e-23!102;UBERON:0006601!6.13e-23!102;UBERON:0000955!8.08e-21!50;UBERON:0006238!8.08e-21!50;UBERON:0001049!8.89e-21!52;UBERON:0005068!8.89e-21!52;UBERON:0006241!8.89e-21!52;UBERON:0007135!8.89e-21!52;UBERON:0000033!1.09e-20!63;UBERON:0002616!3.63e-20!49;UBERON:0002346!8.84e-19!71;UBERON:0003075!8.84e-19!71;UBERON:0007284!8.84e-19!71;UBERON:0003080!7.55e-16!40;UBERON:0002020!8.83e-16!34;UBERON:0003056!1.86e-15!49;UBERON:0002780!3.20e-15!39;UBERON:0001890!3.20e-15!39;UBERON:0006240!3.20e-15!39;UBERON:0002791!5.83e-14!29;UBERON:0003528!5.83e-14!29;UBERON:0001893!5.83e-14!29;UBERON:0007811!9.48e-12!86;UBERON:0000956!3.36e-10!21;UBERON:0001869!3.36e-10!21;UBERON:0000203!3.36e-10!21;UBERON:0000153!3.43e-10!94;UBERON:0002619!1.85e-09!17;UBERON:0004111!5.87e-07!122;UBERON:0002021!7.30e-07!10;UBERON:0000411!7.30e-07!10;UBERON:0001950!7.30e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.76e-26,73;UBERON:0004121,1.62e-24,95;UBERON:0000924,1.62e-24,95;UBERON:0006601,1.62e-24,95;UBERON:0001016,2.42e-24,75;UBERON:0000073,3.37e-22,54;UBERON:0002346,7.95e-21,64;UBERON:0003075,7.95e-21,64;UBERON:0007284,7.95e-21,64;UBERON:0001049,8.89e-21,52;UBERON:0005068,8.89e-21,52;UBERON:0006241,8.89e-21,52;UBERON:0007135,8.89e-21,52;UBERON:0010371,4.91e-20,73;UBERON:0000955,8.12e-19,47;UBERON:0006238,8.12e-19,47;UBERON:0010314,2.30e-18,92;UBERON:0002616,3.52e-18,46;UBERON:0003080,7.55e-16,40;UBERON:0002020,8.83e-16,34;UBERON:0003056,1.86e-15,49;UBERON:0002780,3.20e-15,39;UBERON:0001890,3.20e-15,39;UBERON:0006240,3.20e-15,39;UBERON:0003528,5.83e-14,29;UBERON:0002791,5.83e-14,29;UBERON:0001893,5.83e-14,29;UBERON:0000956,3.36e-10,21;UBERON:0001869,3.36e-10,21;UBERON:0000203,3.36e-10,21;UBERON:0002619,1.85e-09,17;UBERON:0004111,5.87e-07,122;UBERON:0002021,7.30e-07,10;UBERON:0000411,7.30e-07,10;UBERON:0001950,7.30e-07,10 | |||
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| |||
|short_description=p2@Npepps | |||
}} |
Revision as of 11:15, 4 August 2015
Short description: | p2@Npepps |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Npepps_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 146bp_to_ENSMUST00000163950_5end |
EntrezGene: | 19155 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 5.25e-11 | 39 |
electrically active cell | 5.25e-11 | 39 |
neuron | 5.03e-10 | 33 |
neuronal stem cell | 5.03e-10 | 33 |
neuroblast | 5.03e-10 | 33 |
electrically signaling cell | 5.03e-10 | 33 |
CNS neuron (sensu Vertebrata) | 6.82e-10 | 23 |
neuroblast (sensu Vertebrata) | 6.82e-10 | 23 |
neural cell | 6.96e-10 | 43 |
ectodermal cell | 8.79e-10 | 44 |
neurectodermal cell | 8.79e-10 | 44 |