FFCP PHASE1:Mm9::chr11:98614335..98614349,+: Difference between revisions
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{{FFCP|EntrezGene=21833|HGNC=|MCL_coexpression_id=12|UniProt=P63058|association_with_transcript=-254bp_to_uc007lhg.1_5end|description=CAGE_peak_8_at_Thra_5end|id=chr11:98614335..98614349,+|ontology_enrichment_celltype=CL:0002563!8.85e-08!9;CL:0002251!8.85e-08!9|ontology_enrichment_celltype_v019_2=CL:0002563,3.46e-13,9;CL:0002251,3.46e-13,9;CL:0000239,2.32e-08,6;CL:0000677,2.32e-08,6;CL:0000584,2.32e-08,6;CL:0002076,2.45e-07,15;CL:0000075,4.17e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.00e-31!43;UBERON:0005409!1.40e-26!59;UBERON:0000344!5.42e-13!15;UBERON:0001242!3.60e-11!13;UBERON:0000060!3.60e-11!13;UBERON:0001262!3.60e-11!13;UBERON:0004786!3.60e-11!13;UBERON:0002108!1.21e-09!16;UBERON:0001007!4.96e-08!128;UBERON:0001555!4.96e-08!128;UBERON:0007026!4.96e-08!128;UBERON:0003350!8.85e-08!9;UBERON:0004808!8.85e-08!9;UBERON:0001277!8.85e-08!9;UBERON:0004119!1.07e-07!130;UBERON:0000925!1.07e-07!130;UBERON:0006595!1.07e-07!130;UBERON:0001045!2.09e-07!13;UBERON:0004921!4.25e-07!126;UBERON:0004185!4.25e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.16e-44,31;UBERON:0005409,3.86e-29,47;UBERON:0000344,6.01e-20,15;UBERON:0001242,1.05e-16,13;UBERON:0001262,1.05e-16,13;UBERON:0004786,1.05e-16,13;UBERON:0003350,3.46e-13,9;UBERON:0004808,3.46e-13,9;UBERON:0001277,3.46e-13,9;UBERON:0004923,2.59e-11,24;UBERON:0000485,1.59e-10,11;UBERON:0001007,3.80e-10,116;UBERON:0001555,3.80e-10,116;UBERON:0007026,3.80e-10,116;UBERON:0004119,7.58e-10,118;UBERON:0000925,7.58e-10,118;UBERON:0006595,7.58e-10,118;UBERON:0004921,1.12e-08,114|phase1_expression=0,2.79180326111489,0,20.8700305801713,15.5277676283368,1.17515490338323,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.15980299262857,1.60586496747019,0,1.7230479846363,0.430942465371778,1.52018735565099,2.52030129759931,0.665191531965914,0,0,0,2.88851619751275,1.82858109894342,3.06254034393554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31891590961342,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,4.34276993854605,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,9.91256348951394,5.81791246659797,0,0,3.09281907173024,9.68080918192044,7.56085349072559,9.3210556795154,2.84717436926707,4.6115707322723,7.03738584640755,8.75408476981064,7.99352757188393,10.7858329038507,7.13255564586491,7.56736838366595,0,0.114248512609729,0,0,0.387904974335251,0.210407459670956,2.15004226222475,1.62371162777562,4.39596437955849,3.45512058981041,0,0.166845105716094,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,7.96470830039777,0,0.302323556964751,0,0.590603785761546,0.922305443831782,2.06742634534577,0.363533729477506,0.356497378384721,1.8962205476149,1.05418608574999,2.06271086496374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.53813589596716,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0,1.31017538247707,0.269728692769641,0.165306911450672,0.26175594198403,0.777689839750757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0,0.735374033800057,0.888986911206461,0.824140228955577,0.320919209591815,0.252697211763798,1.2673964994512,0.377252682772152,0.37456602987953,0.768301828858431,0.918967503289812,0.952587382566147,0.347652977834566,0,0.412085900803307,0.147198920134397,0.342869252385415,0.532427418478012,0.715308569841963,0.726732083161643,0.941093804153306,0.676916863133412,0.365855945745545,0.789209134313529,0.814824683075171,1.12228454331548,0.711810108745045,0.394017929502254,0.818462086339379,0.619747364743864,1.15743966588685,0,1.40358965067245,1.28922632428979,0,0,0|short_description=p8@Thra}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:21833 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P63058 | |||
|association_with_transcript=-254bp_to_uc007lhg.1_5end | |||
|cluster_id=chr11:98614335..98614349,+ | |||
|description=CAGE_peak_8_at_Thra_5end | |||
|id=chr11:98614335..98614349,+ | |||
|ontology_enrichment_celltype=CL:0002563!8.85e-08!9;CL:0002251!8.85e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.46e-13,9;CL:0002251,3.46e-13,9;CL:0000239,2.32e-08,6;CL:0000677,2.32e-08,6;CL:0000584,2.32e-08,6;CL:0002076,2.45e-07,15;CL:0000075,4.17e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.00e-31!43;UBERON:0005409!1.40e-26!59;UBERON:0000344!5.42e-13!15;UBERON:0001242!3.60e-11!13;UBERON:0000060!3.60e-11!13;UBERON:0001262!3.60e-11!13;UBERON:0004786!3.60e-11!13;UBERON:0002108!1.21e-09!16;UBERON:0001007!4.96e-08!128;UBERON:0001555!4.96e-08!128;UBERON:0007026!4.96e-08!128;UBERON:0003350!8.85e-08!9;UBERON:0004808!8.85e-08!9;UBERON:0001277!8.85e-08!9;UBERON:0004119!1.07e-07!130;UBERON:0000925!1.07e-07!130;UBERON:0006595!1.07e-07!130;UBERON:0001045!2.09e-07!13;UBERON:0004921!4.25e-07!126;UBERON:0004185!4.25e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.16e-44,31;UBERON:0005409,3.86e-29,47;UBERON:0000344,6.01e-20,15;UBERON:0001242,1.05e-16,13;UBERON:0001262,1.05e-16,13;UBERON:0004786,1.05e-16,13;UBERON:0003350,3.46e-13,9;UBERON:0004808,3.46e-13,9;UBERON:0001277,3.46e-13,9;UBERON:0004923,2.59e-11,24;UBERON:0000485,1.59e-10,11;UBERON:0001007,3.80e-10,116;UBERON:0001555,3.80e-10,116;UBERON:0007026,3.80e-10,116;UBERON:0004119,7.58e-10,118;UBERON:0000925,7.58e-10,118;UBERON:0006595,7.58e-10,118;UBERON:0004921,1.12e-08,114 | |||
|phase1_expression=0,2.79180326111489,0,20.8700305801713,15.5277676283368,1.17515490338323,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.15980299262857,1.60586496747019,0,1.7230479846363,0.430942465371778,1.52018735565099,2.52030129759931,0.665191531965914,0,0,0,2.88851619751275,1.82858109894342,3.06254034393554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31891590961342,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,4.34276993854605,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,9.91256348951394,5.81791246659797,0,0,3.09281907173024,9.68080918192044,7.56085349072559,9.3210556795154,2.84717436926707,4.6115707322723,7.03738584640755,8.75408476981064,7.99352757188393,10.7858329038507,7.13255564586491,7.56736838366595,0,0.114248512609729,0,0,0.387904974335251,0.210407459670956,2.15004226222475,1.62371162777562,4.39596437955849,3.45512058981041,0,0.166845105716094,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,7.96470830039777,0,0.302323556964751,0,0.590603785761546,0.922305443831782,2.06742634534577,0.363533729477506,0.356497378384721,1.8962205476149,1.05418608574999,2.06271086496374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.53813589596716,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0,1.31017538247707,0.269728692769641,0.165306911450672,0.26175594198403,0.777689839750757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0,0.735374033800057,0.888986911206461,0.824140228955577,0.320919209591815,0.252697211763798,1.2673964994512,0.377252682772152,0.37456602987953,0.768301828858431,0.918967503289812,0.952587382566147,0.347652977834566,0,0.412085900803307,0.147198920134397,0.342869252385415,0.532427418478012,0.715308569841963,0.726732083161643,0.941093804153306,0.676916863133412,0.365855945745545,0.789209134313529,0.814824683075171,1.12228454331548,0.711810108745045,0.394017929502254,0.818462086339379,0.619747364743864,1.15743966588685,0,1.40358965067245,1.28922632428979,0,0,0 | |||
|short_description=p8@Thra | |||
}} |
Revision as of 12:41, 4 August 2015
Short description: | p8@Thra |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Thra_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -254bp_to_uc007lhg.1_5end |
EntrezGene: | 21833 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.46e-13 | 9 |
epithelial cell of alimentary canal | 3.46e-13 | 9 |
brush border epithelial cell | 2.32e-08 | 6 |
gut absorptive cell | 2.32e-08 | 6 |
enterocyte | 2.32e-08 | 6 |
endo-epithelial cell | 2.45e-07 | 15 |
columnar/cuboidal epithelial cell | 4.17e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.16e-44 | 31 |
gastrointestinal system | 3.86e-29 | 47 |
mucosa | 6.01e-20 | 15 |
intestinal mucosa | 1.05e-16 | 13 |
wall of intestine | 1.05e-16 | 13 |
gastrointestinal system mucosa | 1.05e-16 | 13 |
epithelium of mucosa | 3.46e-13 | 9 |
gastrointestinal system epithelium | 3.46e-13 | 9 |
intestinal epithelium | 3.46e-13 | 9 |
organ component layer | 2.59e-11 | 24 |
simple columnar epithelium | 1.59e-10 | 11 |
digestive system | 3.80e-10 | 116 |
digestive tract | 3.80e-10 | 116 |
primitive gut | 3.80e-10 | 116 |
endoderm-derived structure | 7.58e-10 | 118 |
endoderm | 7.58e-10 | 118 |
presumptive endoderm | 7.58e-10 | 118 |
subdivision of digestive tract | 1.12e-08 | 114 |