FFCP PHASE1:Mm9::chr14:56210656..56210696,+: Difference between revisions
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{{FFCP|EntrezGene=268749|HGNC=|MCL_coexpression_id=24|UniProt=Q924T7|association_with_transcript=29bp_to_NM_194346,uc007tzi.1_5end|description=CAGE_peak_3_at_Rnf31_5end|id=chr14:56210656..56210696,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002563,2.83e-07,9;CL:0002251,2.83e-07,9;CL:0000066,2.94e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!8.44e-16!43;UBERON:0005409!6.48e-15!59;UBERON:0004119!1.16e-12!130;UBERON:0000925!1.16e-12!130;UBERON:0006595!1.16e-12!130;UBERON:0001007!2.09e-12!128;UBERON:0001555!2.09e-12!128;UBERON:0007026!2.09e-12!128;UBERON:0004921!1.36e-11!126;UBERON:0004185!1.36e-11!126;UBERON:0000344!6.87e-09!15;UBERON:0004923!4.37e-08!24;UBERON:0001242!5.61e-08!13;UBERON:0000060!5.61e-08!13;UBERON:0001262!5.61e-08!13;UBERON:0004786!5.61e-08!13;UBERON:0007023!5.80e-08!51;UBERON:0002108!7.51e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.58e-14,31;UBERON:0005409,7.16e-12,47;UBERON:0001007,6.52e-11,116;UBERON:0001555,6.52e-11,116;UBERON:0007026,6.52e-11,116;UBERON:0000344,6.56e-11,15;UBERON:0004119,7.02e-11,118;UBERON:0000925,7.02e-11,118;UBERON:0006595,7.02e-11,118;UBERON:0004921,4.90e-10,114;UBERON:0001242,9.51e-10,13;UBERON:0001262,9.51e-10,13;UBERON:0004786,9.51e-10,13;UBERON:0004923,1.86e-09,24;UBERON:0007023,1.25e-08,51;UBERON:0002365,3.76e-08,25;UBERON:0002330,3.76e-08,25;UBERON:0003350,2.83e-07,9;UBERON:0004808,2.83e-07,9;UBERON:0001277,2.83e-07,9;UBERON:0009854,4.81e-07,23;UBERON:0009856,4.81e-07,23|phase1_expression=1.28119077683835,6.2815573375085,10.0099832665698,24.8020653271601,33.5600139064053,3.86122325397347,3.97141489012394,0.516493293766305,2.67498572088167,7.95819389494778,0,0.159544317990673,0,0.524522414513984,2.33176833270964,1.82227740650843,2.09868563438444,0.788655413395594,0.411343300817216,0.42438965179803,1.02051948181284,1.78723712161594,2.08959831311148,3.35984087866154,4.12936705920906,6.31655160526522,4.30761996159075,4.30942465371778,6.27077284206034,4.03248207615889,1.99557459589774,2.54012269383853,2.46025915033828,0,2.88851619751275,2.65975432573588,2.6542016314108,2.09265815368454,2.3440060335714,1.0470474879476,2.35292595212406,2.73218193983378,2.91306211818692,0.125896817975577,0.709638518536602,0,2.34717403304412,0.436050312760893,1.75748946187577,1.1665793944457,0,0,0.335565212115473,1.45072428402269,4.36921938885203,0,0.85960031981627,0,0.606949382578793,0.528990979272033,0,0.677689064138264,0.889294796111139,0.899899717281399,0.988866362566974,0.7104801149461,0.299600110518405,0.384218305321555,0,0.270011876663381,0,0.856952953211411,0.441737081903227,0.122490799214954,0.0958454710182364,0,2.20231761998777,0.638436690425939,0.614426133024974,0.395658863190582,0.548925861614458,0.52091337055676,1.67509799400829,0.56276261003168,0.916789486660861,0.883885756421003,0.284743361598206,0.745597783301202,0.227178579999552,0.302286240427142,6.37701875143691,2.58127163094416,2.719885334831,2.15881276655127,5.19821133958135,4.92829575807069,1.68533304158102,0.170430322578058,0.259786004602869,0.35333957451034,0.845060518660083,0,0,0,0.865964164044856,0.506719730950197,1.01104889002957,2.96878087269556,2.33044095282455,0.890652834388949,0.693941307064543,0.304465478312141,0.461230994512117,0.452167921657868,1.05829836422134,0.502666365318702,3.95511948374998,1.87979163995885,3.5384422077995,0.323533699894818,1.10420759230197,1.93950101254089,3.72783522436244,0.292780797011547,0.209446706813455,7.91916871146633,0.479260498023681,0,0.381210681219194,1.3481157546434,1.37250180845588,0.753926112677186,0.347648640384553,0.511430914660661,1.66230435647648,0.486723789203273,1.01839363850316,1.61729061793121,1.76905930903572,7.57590681191306,0.390361328888111,0.689706313300419,0.180062129805349,0.60281927134286,0.272145996605311,0.2562274405697,0.187403449119458,3.88055056108524,0.215567992932842,0.378212160335639,0.351902248327898,0.43839146485515,0,0,0.205782136407943,0.199034266818493,0,0.257347907114715,0,0.207125772535502,1.87620847984877,0.720248245844059,0.473489471170421,0.787056926989615,0,0.465067889500816,0,0.583826711835847,0.493679549740441,0.32833492815819,0.891756905004413,0.584799949701329,0.658650345873152,1.20785776884335,0.630869845692382,0.411618449517138,21.1468021109631,15.6025834331491,0.426576501070468,0.232236671860439,0.644337306610467,1.61346819698674,1.55664630691409,0.760902504450237,4.74529061544512,1.15289268306808,3.51869292320377,4.37704238490532,3.31438948102504,11.6846523125049,7.99710784536369,8.56307474993779,0.379335801906163,1.48523066392647,0,0.814605311381257,0.581857461502877,1.40271639780637,1.20149420536089,1.03327103585722,1.41298855057237,1.48076596706161,5.33614728756868,1.33476084572875,1.57247196090562,0.224862112384854,1.21716072833102,1.4470629585145,1.2731292589071,2.01387296215567,1.62135226775035,2.19649130550465,0,1.48856379067401,1.24815069245824,1.76805214562978,1.97337154874103,2.8946611281802,1.47802552133284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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:268749 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q924T7 | |||
|association_with_transcript=29bp_to_NM_194346,uc007tzi.1_5end | |||
|cluster_id=chr14:56210656..56210696,+ | |||
|description=CAGE_peak_3_at_Rnf31_5end | |||
|id=chr14:56210656..56210696,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.83e-07,9;CL:0002251,2.83e-07,9;CL:0000066,2.94e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!8.44e-16!43;UBERON:0005409!6.48e-15!59;UBERON:0004119!1.16e-12!130;UBERON:0000925!1.16e-12!130;UBERON:0006595!1.16e-12!130;UBERON:0001007!2.09e-12!128;UBERON:0001555!2.09e-12!128;UBERON:0007026!2.09e-12!128;UBERON:0004921!1.36e-11!126;UBERON:0004185!1.36e-11!126;UBERON:0000344!6.87e-09!15;UBERON:0004923!4.37e-08!24;UBERON:0001242!5.61e-08!13;UBERON:0000060!5.61e-08!13;UBERON:0001262!5.61e-08!13;UBERON:0004786!5.61e-08!13;UBERON:0007023!5.80e-08!51;UBERON:0002108!7.51e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.58e-14,31;UBERON:0005409,7.16e-12,47;UBERON:0001007,6.52e-11,116;UBERON:0001555,6.52e-11,116;UBERON:0007026,6.52e-11,116;UBERON:0000344,6.56e-11,15;UBERON:0004119,7.02e-11,118;UBERON:0000925,7.02e-11,118;UBERON:0006595,7.02e-11,118;UBERON:0004921,4.90e-10,114;UBERON:0001242,9.51e-10,13;UBERON:0001262,9.51e-10,13;UBERON:0004786,9.51e-10,13;UBERON:0004923,1.86e-09,24;UBERON:0007023,1.25e-08,51;UBERON:0002365,3.76e-08,25;UBERON:0002330,3.76e-08,25;UBERON:0003350,2.83e-07,9;UBERON:0004808,2.83e-07,9;UBERON:0001277,2.83e-07,9;UBERON:0009854,4.81e-07,23;UBERON:0009856,4.81e-07,23 | |||
|phase1_expression=1.28119077683835,6.2815573375085,10.0099832665698,24.8020653271601,33.5600139064053,3.86122325397347,3.97141489012394,0.516493293766305,2.67498572088167,7.95819389494778,0,0.159544317990673,0,0.524522414513984,2.33176833270964,1.82227740650843,2.09868563438444,0.788655413395594,0.411343300817216,0.42438965179803,1.02051948181284,1.78723712161594,2.08959831311148,3.35984087866154,4.12936705920906,6.31655160526522,4.30761996159075,4.30942465371778,6.27077284206034,4.03248207615889,1.99557459589774,2.54012269383853,2.46025915033828,0,2.88851619751275,2.65975432573588,2.6542016314108,2.09265815368454,2.3440060335714,1.0470474879476,2.35292595212406,2.73218193983378,2.91306211818692,0.125896817975577,0.709638518536602,0,2.34717403304412,0.436050312760893,1.75748946187577,1.1665793944457,0,0,0.335565212115473,1.45072428402269,4.36921938885203,0,0.85960031981627,0,0.606949382578793,0.528990979272033,0,0.677689064138264,0.889294796111139,0.899899717281399,0.988866362566974,0.7104801149461,0.299600110518405,0.384218305321555,0,0.270011876663381,0,0.856952953211411,0.441737081903227,0.122490799214954,0.0958454710182364,0,2.20231761998777,0.638436690425939,0.614426133024974,0.395658863190582,0.548925861614458,0.52091337055676,1.67509799400829,0.56276261003168,0.916789486660861,0.883885756421003,0.284743361598206,0.745597783301202,0.227178579999552,0.302286240427142,6.37701875143691,2.58127163094416,2.719885334831,2.15881276655127,5.19821133958135,4.92829575807069,1.68533304158102,0.170430322578058,0.259786004602869,0.35333957451034,0.845060518660083,0,0,0,0.865964164044856,0.506719730950197,1.01104889002957,2.96878087269556,2.33044095282455,0.890652834388949,0.693941307064543,0.304465478312141,0.461230994512117,0.452167921657868,1.05829836422134,0.502666365318702,3.95511948374998,1.87979163995885,3.5384422077995,0.323533699894818,1.10420759230197,1.93950101254089,3.72783522436244,0.292780797011547,0.209446706813455,7.91916871146633,0.479260498023681,0,0.381210681219194,1.3481157546434,1.37250180845588,0.753926112677186,0.347648640384553,0.511430914660661,1.66230435647648,0.486723789203273,1.01839363850316,1.61729061793121,1.76905930903572,7.57590681191306,0.390361328888111,0.689706313300419,0.180062129805349,0.60281927134286,0.272145996605311,0.2562274405697,0.187403449119458,3.88055056108524,0.215567992932842,0.378212160335639,0.351902248327898,0.43839146485515,0,0,0.205782136407943,0.199034266818493,0,0.257347907114715,0,0.207125772535502,1.87620847984877,0.720248245844059,0.473489471170421,0.787056926989615,0,0.465067889500816,0,0.583826711835847,0.493679549740441,0.32833492815819,0.891756905004413,0.584799949701329,0.658650345873152,1.20785776884335,0.630869845692382,0.411618449517138,21.1468021109631,15.6025834331491,0.426576501070468,0.232236671860439,0.644337306610467,1.61346819698674,1.55664630691409,0.760902504450237,4.74529061544512,1.15289268306808,3.51869292320377,4.37704238490532,3.31438948102504,11.6846523125049,7.99710784536369,8.56307474993779,0.379335801906163,1.48523066392647,0,0.814605311381257,0.581857461502877,1.40271639780637,1.20149420536089,1.03327103585722,1.41298855057237,1.48076596706161,5.33614728756868,1.33476084572875,1.57247196090562,0.224862112384854,1.21716072833102,1.4470629585145,1.2731292589071,2.01387296215567,1.62135226775035,2.19649130550465,0,1.48856379067401,1.24815069245824,1.76805214562978,1.97337154874103,2.8946611281802,1.47802552133284,0,0.488894929326078,0.169745085775188,0.469380496577004,0.502518772325447,1.42826184531608,2.73187107000918,1.10344600874334,1.99318220683897,1.11618338060241,0.81931657357869,0.863424909329478,0.433947175744535,0,5.98296252200581,5.4094070032094,2.20749397043786,0.963303539926752,0.586058432961016,0,0.757412781613119,0,0.390438744296638,0.430846795465598,0.477937595905104,0,0.283076530788832,0.404810701674894,0,0.395287777946524,0.321321316421807,1.27746076687442,0,0.162886959353576,2.8044920905331,3.98235415019888,1.21390318077491,2.72091201268276,1.32023555829129,2.95301892880773,1.53717573971964,4.39328098385976,4.36240475373007,2.85197902707777,4.42451461110142,8.4334886859999,1.03135543248187,1.36175842301515,0.36012218806262,0.905510786479282,0.428674070063185,1.06404140185364,0.535106452806212,0.987294123612726,3.95804433848979,1.64270195644597,0.847328283455281,4.41056796109924,0.49465875882444,0.645857706783622,0.422190474497091,0.238744688006273,0.656563598980245,2.91480836629851,0.741701208042039,1.87957968877638,0.412773735926445,0.370389054739423,1.13021074202815,1.50363650493128,1.60144721244566,0.169978429993855,0.279902904647316,0.690999869022119,2.86401185404534,0.790839983952838,0.406638934253697,0.648032044930808,0.418176592028937,0.655087691238533,1.61837215661785,2.0663363931334,1.57053565190418,5.05498395837992,6.21339313086926,0.56369293868419,0.448549638131936,0.165458490457098,0.583353565032143,0.129159823477731,0.506868376472335,0.469428954583016,1.3020438484395,2.30690557736564,0.724752362478018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| |||
|short_description=p3@Rnf31 | |||
}} |
Revision as of 12:43, 4 August 2015
Short description: | p3@Rnf31 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Rnf31_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 29bp_to_NM_194346, uc007tzi.1_5end |
EntrezGene: | 268749 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.83e-07 | 9 |
epithelial cell of alimentary canal | 2.83e-07 | 9 |
epithelial cell | 2.94e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.58e-14 | 31 |
gastrointestinal system | 7.16e-12 | 47 |
digestive system | 6.52e-11 | 116 |
digestive tract | 6.52e-11 | 116 |
primitive gut | 6.52e-11 | 116 |
mucosa | 6.56e-11 | 15 |
endoderm-derived structure | 7.02e-11 | 118 |
endoderm | 7.02e-11 | 118 |
presumptive endoderm | 7.02e-11 | 118 |
subdivision of digestive tract | 4.90e-10 | 114 |
intestinal mucosa | 9.51e-10 | 13 |
wall of intestine | 9.51e-10 | 13 |
gastrointestinal system mucosa | 9.51e-10 | 13 |
organ component layer | 1.86e-09 | 24 |
adult organism | 1.25e-08 | 51 |
exocrine gland | 3.76e-08 | 25 |
exocrine system | 3.76e-08 | 25 |
epithelium of mucosa | 2.83e-07 | 9 |
gastrointestinal system epithelium | 2.83e-07 | 9 |
intestinal epithelium | 2.83e-07 | 9 |
digestive tract diverticulum | 4.81e-07 | 23 |
sac | 4.81e-07 | 23 |