FFCP PHASE1:Mm9::chr5:65928143..65928170,+: Difference between revisions
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{{FFCP|EntrezGene=53323|HGNC=|MCL_coexpression_id=656|UniProt=P61087|association_with_transcript=-301bp_to_ENSMUST00000142407_5end|description=CAGE_peak_6_at_Ube2k_5end|id=chr5:65928143..65928170,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000682,2.59e-16,3;CL:0000239,1.12e-13,6;CL:0000677,1.12e-13,6;CL:0000584,1.12e-13,6;CL:0000075,9.44e-12,7;CL:0000066,2.42e-09,25;CL:0002563,3.54e-09,9;CL:0002251,3.54e-09,9;CL:0000473,2.87e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.26e-15,15;UBERON:0001962,2.13e-10,2;UBERON:0001961,2.13e-10,2;UBERON:0001744,2.13e-10,2;UBERON:0001242,1.70e-09,13;UBERON:0001262,1.70e-09,13;UBERON:0004786,1.70e-09,13;UBERON:0004923,2.36e-09,24;UBERON:0003350,3.54e-09,9;UBERON:0004808,3.54e-09,9;UBERON:0001277,3.54e-09,9;UBERON:0000485,1.56e-07,11;UBERON:0002465,3.22e-07,3|phase1_expression=0,5.93258192986914,7.27998783023258,0.30246421130683,0.500895729946347,5.03637815735669,4.20502753071946,0.516493293766305,6.19470377467334,6.55380673701582,0.171217968225505,0.159544317990673,0,0,0,0,0,0.157731082679119,0,0,4.67738095830884,0.0992909512008853,0,2.07990149631429,3.21172993494038,6.89078356938024,6.46142994238612,7.75696437669201,0,0,3.54768817048488,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0.335565212115473,1.45072428402269,0,0,0,0,0.809265843438391,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0.0958454710182364,0,0,0.255374676170375,0,0,0.274462930807229,0,0,0,0,0,0.284743361598206,0,0.454357159999104,0.151143120213571,0,0.860423876981386,0,0,0,0,0.421333260395256,0,0.259786004602869,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0.45673551887624,0.776813650941515,0,0,0,0,0,0.23517741427141,0,0,0.289198713839823,0,0,0,0,0,0,0,0,0.359445373517761,0,0.381210681219194,0,0,0,0,0,0.20778804455956,0,0.101839363850316,0.124406970610093,0.758168275301024,0.420883711772948,0,0.229902104433473,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0.852490498186778,0,0,0,0,0,0,0,0,0.233530684734339,0.16455984991348,0,0,0.146199987425332,0,0.268412837520744,0,0.102904612379284,0,0,0.213288250535234,0,0,0,0,0,0.474529061544512,0.164698954724011,0,0,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0.193952487167626,0.140271639780637,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0.315270288212382,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0,0,0,0,0.188605079755898,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0,0.18006109403131,0,0,0,0.356737635204141,0,0,0.704015124191131,0,0,0.8244312647074,0.322928853391811,0.120625849856312,0,0.164140899745061,0,0,0,0.206386867963223,0,0,0.136694227721025,0.228778173206523,0.339956859987711,1.11961161858926,0.829199842826543,0,0,0,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,15.7834022831573,0,0,0,0,0,0.117357238645754,0,0,0.483168241652012,4.32045009386798,0,0.202725215290164,0.308132871494482,0,0.179026695667481,0,0.360586348559907,0,0,0.15241361331,0.504130925684203,0.38983152295901,0.481059208201647,0.233753804363138,0.226730383615211,0,0,0,0.19318959403219,0,0.183151624267265,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0.114870937911227,0,0.231768651889711,0,0.412085900803307,0,0,0,0,0,0,0.0846146078916765,0,0.526139422875686,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p6@Ube2k}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:53323 | |||
|HGNC= | |||
|MCL_coexpression_id=656 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P61087 | |||
|association_with_transcript=-301bp_to_ENSMUST00000142407_5end | |||
|cluster_id=chr5:65928143..65928170,+ | |||
|description=CAGE_peak_6_at_Ube2k_5end | |||
|id=chr5:65928143..65928170,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,2.59e-16,3;CL:0000239,1.12e-13,6;CL:0000677,1.12e-13,6;CL:0000584,1.12e-13,6;CL:0000075,9.44e-12,7;CL:0000066,2.42e-09,25;CL:0002563,3.54e-09,9;CL:0002251,3.54e-09,9;CL:0000473,2.87e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.26e-15,15;UBERON:0001962,2.13e-10,2;UBERON:0001961,2.13e-10,2;UBERON:0001744,2.13e-10,2;UBERON:0001242,1.70e-09,13;UBERON:0001262,1.70e-09,13;UBERON:0004786,1.70e-09,13;UBERON:0004923,2.36e-09,24;UBERON:0003350,3.54e-09,9;UBERON:0004808,3.54e-09,9;UBERON:0001277,3.54e-09,9;UBERON:0000485,1.56e-07,11;UBERON:0002465,3.22e-07,3 | |||
|phase1_expression=0,5.93258192986914,7.27998783023258,0.30246421130683,0.500895729946347,5.03637815735669,4.20502753071946,0.516493293766305,6.19470377467334,6.55380673701582,0.171217968225505,0.159544317990673,0,0,0,0,0,0.157731082679119,0,0,4.67738095830884,0.0992909512008853,0,2.07990149631429,3.21172993494038,6.89078356938024,6.46142994238612,7.75696437669201,0,0,3.54768817048488,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0.335565212115473,1.45072428402269,0,0,0,0,0.809265843438391,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0.0958454710182364,0,0,0.255374676170375,0,0,0.274462930807229,0,0,0,0,0,0.284743361598206,0,0.454357159999104,0.151143120213571,0,0.860423876981386,0,0,0,0,0.421333260395256,0,0.259786004602869,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0.45673551887624,0.776813650941515,0,0,0,0,0,0.23517741427141,0,0,0.289198713839823,0,0,0,0,0,0,0,0,0.359445373517761,0,0.381210681219194,0,0,0,0,0,0.20778804455956,0,0.101839363850316,0.124406970610093,0.758168275301024,0.420883711772948,0,0.229902104433473,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0.852490498186778,0,0,0,0,0,0,0,0,0.233530684734339,0.16455984991348,0,0,0.146199987425332,0,0.268412837520744,0,0.102904612379284,0,0,0.213288250535234,0,0,0,0,0,0.474529061544512,0.164698954724011,0,0,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0.193952487167626,0.140271639780637,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0.315270288212382,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0,0,0,0,0.188605079755898,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0,0.18006109403131,0,0,0,0.356737635204141,0,0,0.704015124191131,0,0,0.8244312647074,0.322928853391811,0.120625849856312,0,0.164140899745061,0,0,0,0.206386867963223,0,0,0.136694227721025,0.228778173206523,0.339956859987711,1.11961161858926,0.829199842826543,0,0,0,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,15.7834022831573,0,0,0,0,0,0.117357238645754,0,0,0.483168241652012,4.32045009386798,0,0.202725215290164,0.308132871494482,0,0.179026695667481,0,0.360586348559907,0,0,0.15241361331,0.504130925684203,0.38983152295901,0.481059208201647,0.233753804363138,0.226730383615211,0,0,0,0.19318959403219,0,0.183151624267265,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0.114870937911227,0,0.231768651889711,0,0.412085900803307,0,0,0,0,0,0,0.0846146078916765,0,0.526139422875686,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p6@Ube2k | |||
}} |
Revision as of 12:52, 4 August 2015
Short description: | p6@Ube2k |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Ube2k_5end |
Coexpression cluster: | MCL_coexpression_mm9:656 |
Association with transcript: | -301bp_to_ENSMUST00000142407_5end |
EntrezGene: | 53323 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 2.59e-16 | 3 |
brush border epithelial cell | 1.12e-13 | 6 |
gut absorptive cell | 1.12e-13 | 6 |
enterocyte | 1.12e-13 | 6 |
columnar/cuboidal epithelial cell | 9.44e-12 | 7 |
epithelial cell | 2.42e-09 | 25 |
intestinal epithelial cell | 3.54e-09 | 9 |
epithelial cell of alimentary canal | 3.54e-09 | 9 |
defensive cell | 2.87e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.26e-15 | 15 |
gut-associated lymphoid tissue | 2.13e-10 | 2 |
mucosa-associated lymphoid tissue | 2.13e-10 | 2 |
lymphoid tissue | 2.13e-10 | 2 |
intestinal mucosa | 1.70e-09 | 13 |
wall of intestine | 1.70e-09 | 13 |
gastrointestinal system mucosa | 1.70e-09 | 13 |
organ component layer | 2.36e-09 | 24 |
epithelium of mucosa | 3.54e-09 | 9 |
gastrointestinal system epithelium | 3.54e-09 | 9 |
intestinal epithelium | 3.54e-09 | 9 |
simple columnar epithelium | 1.56e-07 | 11 |
lymphoid system | 3.22e-07 | 3 |