FFCP PHASE1:Mm9::chr5:69732938..69732953,-: Difference between revisions
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{{FFCP|EntrezGene=243043|HGNC=|MCL_coexpression_id=401|UniProt=Q50H33|association_with_transcript=0bp_to_ENSMUST00000054095,NM_175519,uc008xqj.1_5end|description=CAGE_peak_3_at_Kctd8_5end|id=chr5:69732938..69732953,-|ontology_enrichment_celltype=CL:0000117!2.98e-13!23;CL:0000337!2.98e-13!23;CL:0000540!2.65e-08!33;CL:0000047!2.65e-08!33;CL:0000031!2.65e-08!33;CL:0000404!2.65e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.61e-22,23;CL:0000337,1.61e-22,23;CL:0000540,8.51e-15,33;CL:0000047,8.51e-15,33;CL:0000031,8.51e-15,33;CL:0000404,8.51e-15,33;CL:0000393,4.57e-12,39;CL:0000211,4.57e-12,39;CL:0002319,1.13e-10,43;CL:0000221,2.31e-10,44;CL:0000133,2.31e-10,44;CL:0002610,8.68e-10,3;CL:0002614,1.06e-09,3;CL:0000120,2.53e-09,3;CL:0002612,4.87e-09,3;CL:0002611,3.51e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!3.84e-20!71;UBERON:0003075!3.84e-20!71;UBERON:0007284!3.84e-20!71;UBERON:0000033!1.06e-19!63;UBERON:0001049!4.45e-18!52;UBERON:0005068!4.45e-18!52;UBERON:0006241!4.45e-18!52;UBERON:0007135!4.45e-18!52;UBERON:0001017!4.61e-17!73;UBERON:0005743!4.61e-17!73;UBERON:0003056!1.33e-16!49;UBERON:0000073!4.20e-16!75;UBERON:0001016!4.20e-16!75;UBERON:0002616!9.38e-16!49;UBERON:0004121!1.39e-15!102;UBERON:0000924!1.39e-15!102;UBERON:0006601!1.39e-15!102;UBERON:0000955!3.79e-15!50;UBERON:0006238!3.79e-15!50;UBERON:0002020!1.06e-12!34;UBERON:0007811!1.35e-11!86;UBERON:0003080!1.53e-11!40;UBERON:0002780!8.55e-11!39;UBERON:0001890!8.55e-11!39;UBERON:0006240!8.55e-11!39;UBERON:0000025!2.55e-10!114;UBERON:0004111!2.82e-09!122;UBERON:0000153!3.47e-09!94;UBERON:0002791!4.58e-09!29;UBERON:0003528!4.58e-09!29;UBERON:0001893!4.58e-09!29;UBERON:0003076!8.50e-08!12;UBERON:0003057!8.50e-08!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.88e-25,73;UBERON:0000073,1.24e-24,54;UBERON:0001016,5.00e-24,75;UBERON:0003076,6.88e-24,12;UBERON:0003057,6.88e-24,12;UBERON:0004121,7.78e-23,95;UBERON:0000924,7.78e-23,95;UBERON:0006601,7.78e-23,95;UBERON:0002346,8.71e-22,64;UBERON:0003075,8.71e-22,64;UBERON:0007284,8.71e-22,64;UBERON:0001049,5.23e-21,52;UBERON:0005068,5.23e-21,52;UBERON:0006241,5.23e-21,52;UBERON:0007135,5.23e-21,52;UBERON:0010371,1.72e-18,73;UBERON:0002240,1.55e-17,6;UBERON:0005174,1.55e-17,6;UBERON:0001137,1.55e-17,6;UBERON:0001948,1.39e-14,5;UBERON:0002315,1.39e-14,5;UBERON:0010314,1.20e-13,92;UBERON:0002950,1.46e-12,4;UBERON:0001891,1.46e-12,4;UBERON:0009616,1.46e-12,4;UBERON:0010286,1.46e-12,4;UBERON:0002020,7.28e-12,34;UBERON:0002616,1.91e-11,46;UBERON:0000955,3.92e-11,47;UBERON:0006238,3.92e-11,47;UBERON:0004684,8.68e-10,3;UBERON:0002275,8.68e-10,3;UBERON:0002038,1.06e-09,3;UBERON:0009663,1.06e-09,3;UBERON:0009661,1.06e-09,3;UBERON:0000125,1.06e-09,3;UBERON:0002308,1.06e-09,3;UBERON:0002420,3.09e-09,8;UBERON:0007245,3.09e-09,8;UBERON:0010009,3.09e-09,8;UBERON:0010011,3.09e-09,8;UBERON:0000454,3.09e-09,8;UBERON:0002257,4.87e-09,3;UBERON:0004733,1.08e-08,6;UBERON:0004732,1.08e-08,6;UBERON:0002028,1.08e-08,6;UBERON:0007277,1.08e-08,6;UBERON:0003056,1.40e-08,49;UBERON:0002256,3.51e-07,2;UBERON:0000025,3.73e-07,114;UBERON:0001896,4.31e-07,2;UBERON:0002298,4.31e-07,2;UBERON:0005290,4.31e-07,2;UBERON:0010096,4.31e-07,2;UBERON:0003080,9.93e-07,40|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,1.5869729378161,4.43681982454325,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0.135005938331691,0.420649922702764,2.85650984403804,2.42955395046775,0.367472397644862,0.287536413054709,0,2.20231761998777,2.55374676170375,2.76491759861238,0.527545150920775,0.274462930807229,0,5.30447698102624,2.25105044012672,1.37518422999129,2.35702868378934,1.85083185038834,1.1183966749518,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,3.51336956413857,4.60782754989601,0,0,0,0,3.14560342750128,1.83000241127451,2.76439574648302,0.869121600961382,0.767146371990992,1.87009240103604,1.29793010454206,0.101839363850316,0,0,0.210441855886474,0.130120442962704,0.919608417733892,0.720248519221397,0.90422890701429,1.29269348387523,1.15302348256365,1.40552586839593,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0.196764231747404,0,0,0.536546802799238,0.116765342367169,0.329119699826961,0.492502392237286,0.243206428637567,0.146199987425332,0.219550115291051,0.134206418760372,1.26173969138476,0.411618449517138,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0.295220295959204,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0.339490171550376,0.469380496577004,0.167506257441816,0.476087281772027,0.195133647857799,0,0.221464689648775,0.159454768657487,0,0.345369963731791,0.144649058581512,0,0,0,0,3.37156238974363,2.10981035865966,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0,1.32745138339963,0,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0.258717367565509,0,0.177340233642274,0.356737635204141,0.658196082408484,0.304464949114599,0,0,0,0,0,0,0,0,0,4.07935664423121,0,0,0,0,0,0,0,0.139951452323658,0,0,0.158167996790568,0,0.108005340821801,0,0,0.269728692769641,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0.316011120628178,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,0.572895513439397,1.03111909406213,0.685082519770642,2.2661816921691,0,0.900642406448441,0,0,0.103787347584177,0,0.170733605754134,0,0,0.367687016900028,0.222246727801615,0,0.64183841918363,0.252697211763798,0.760437899670719,0.377252682772152,0.37456602987953,0.0640251524048693,0,0,0.115884325944855,0.38581844092741,0,0,0,0.354951612318675,0.238436189947321,0,0.376437521661322,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0.385813221962283,0,0,0.429742108096597,0,0.220591419119515,0|short_description=p3@Kctd8}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:243043 | |||
|HGNC= | |||
|MCL_coexpression_id=401 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q50H33 | |||
|association_with_transcript=0bp_to_ENSMUST00000054095,NM_175519,uc008xqj.1_5end | |||
|cluster_id=chr5:69732938..69732953,- | |||
|description=CAGE_peak_3_at_Kctd8_5end | |||
|id=chr5:69732938..69732953,- | |||
|ontology_enrichment_celltype=CL:0000117!2.98e-13!23;CL:0000337!2.98e-13!23;CL:0000540!2.65e-08!33;CL:0000047!2.65e-08!33;CL:0000031!2.65e-08!33;CL:0000404!2.65e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.61e-22,23;CL:0000337,1.61e-22,23;CL:0000540,8.51e-15,33;CL:0000047,8.51e-15,33;CL:0000031,8.51e-15,33;CL:0000404,8.51e-15,33;CL:0000393,4.57e-12,39;CL:0000211,4.57e-12,39;CL:0002319,1.13e-10,43;CL:0000221,2.31e-10,44;CL:0000133,2.31e-10,44;CL:0002610,8.68e-10,3;CL:0002614,1.06e-09,3;CL:0000120,2.53e-09,3;CL:0002612,4.87e-09,3;CL:0002611,3.51e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.84e-20!71;UBERON:0003075!3.84e-20!71;UBERON:0007284!3.84e-20!71;UBERON:0000033!1.06e-19!63;UBERON:0001049!4.45e-18!52;UBERON:0005068!4.45e-18!52;UBERON:0006241!4.45e-18!52;UBERON:0007135!4.45e-18!52;UBERON:0001017!4.61e-17!73;UBERON:0005743!4.61e-17!73;UBERON:0003056!1.33e-16!49;UBERON:0000073!4.20e-16!75;UBERON:0001016!4.20e-16!75;UBERON:0002616!9.38e-16!49;UBERON:0004121!1.39e-15!102;UBERON:0000924!1.39e-15!102;UBERON:0006601!1.39e-15!102;UBERON:0000955!3.79e-15!50;UBERON:0006238!3.79e-15!50;UBERON:0002020!1.06e-12!34;UBERON:0007811!1.35e-11!86;UBERON:0003080!1.53e-11!40;UBERON:0002780!8.55e-11!39;UBERON:0001890!8.55e-11!39;UBERON:0006240!8.55e-11!39;UBERON:0000025!2.55e-10!114;UBERON:0004111!2.82e-09!122;UBERON:0000153!3.47e-09!94;UBERON:0002791!4.58e-09!29;UBERON:0003528!4.58e-09!29;UBERON:0001893!4.58e-09!29;UBERON:0003076!8.50e-08!12;UBERON:0003057!8.50e-08!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.88e-25,73;UBERON:0000073,1.24e-24,54;UBERON:0001016,5.00e-24,75;UBERON:0003076,6.88e-24,12;UBERON:0003057,6.88e-24,12;UBERON:0004121,7.78e-23,95;UBERON:0000924,7.78e-23,95;UBERON:0006601,7.78e-23,95;UBERON:0002346,8.71e-22,64;UBERON:0003075,8.71e-22,64;UBERON:0007284,8.71e-22,64;UBERON:0001049,5.23e-21,52;UBERON:0005068,5.23e-21,52;UBERON:0006241,5.23e-21,52;UBERON:0007135,5.23e-21,52;UBERON:0010371,1.72e-18,73;UBERON:0002240,1.55e-17,6;UBERON:0005174,1.55e-17,6;UBERON:0001137,1.55e-17,6;UBERON:0001948,1.39e-14,5;UBERON:0002315,1.39e-14,5;UBERON:0010314,1.20e-13,92;UBERON:0002950,1.46e-12,4;UBERON:0001891,1.46e-12,4;UBERON:0009616,1.46e-12,4;UBERON:0010286,1.46e-12,4;UBERON:0002020,7.28e-12,34;UBERON:0002616,1.91e-11,46;UBERON:0000955,3.92e-11,47;UBERON:0006238,3.92e-11,47;UBERON:0004684,8.68e-10,3;UBERON:0002275,8.68e-10,3;UBERON:0002038,1.06e-09,3;UBERON:0009663,1.06e-09,3;UBERON:0009661,1.06e-09,3;UBERON:0000125,1.06e-09,3;UBERON:0002308,1.06e-09,3;UBERON:0002420,3.09e-09,8;UBERON:0007245,3.09e-09,8;UBERON:0010009,3.09e-09,8;UBERON:0010011,3.09e-09,8;UBERON:0000454,3.09e-09,8;UBERON:0002257,4.87e-09,3;UBERON:0004733,1.08e-08,6;UBERON:0004732,1.08e-08,6;UBERON:0002028,1.08e-08,6;UBERON:0007277,1.08e-08,6;UBERON:0003056,1.40e-08,49;UBERON:0002256,3.51e-07,2;UBERON:0000025,3.73e-07,114;UBERON:0001896,4.31e-07,2;UBERON:0002298,4.31e-07,2;UBERON:0005290,4.31e-07,2;UBERON:0010096,4.31e-07,2;UBERON:0003080,9.93e-07,40 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,1.5869729378161,4.43681982454325,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0.135005938331691,0.420649922702764,2.85650984403804,2.42955395046775,0.367472397644862,0.287536413054709,0,2.20231761998777,2.55374676170375,2.76491759861238,0.527545150920775,0.274462930807229,0,5.30447698102624,2.25105044012672,1.37518422999129,2.35702868378934,1.85083185038834,1.1183966749518,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,3.51336956413857,4.60782754989601,0,0,0,0,3.14560342750128,1.83000241127451,2.76439574648302,0.869121600961382,0.767146371990992,1.87009240103604,1.29793010454206,0.101839363850316,0,0,0.210441855886474,0.130120442962704,0.919608417733892,0.720248519221397,0.90422890701429,1.29269348387523,1.15302348256365,1.40552586839593,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0.196764231747404,0,0,0.536546802799238,0.116765342367169,0.329119699826961,0.492502392237286,0.243206428637567,0.146199987425332,0.219550115291051,0.134206418760372,1.26173969138476,0.411618449517138,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0.295220295959204,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0.339490171550376,0.469380496577004,0.167506257441816,0.476087281772027,0.195133647857799,0,0.221464689648775,0.159454768657487,0,0.345369963731791,0.144649058581512,0,0,0,0,3.37156238974363,2.10981035865966,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0,1.32745138339963,0,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0.258717367565509,0,0.177340233642274,0.356737635204141,0.658196082408484,0.304464949114599,0,0,0,0,0,0,0,0,0,4.07935664423121,0,0,0,0,0,0,0,0.139951452323658,0,0,0.158167996790568,0,0.108005340821801,0,0,0.269728692769641,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0.316011120628178,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,0.572895513439397,1.03111909406213,0.685082519770642,2.2661816921691,0,0.900642406448441,0,0,0.103787347584177,0,0.170733605754134,0,0,0.367687016900028,0.222246727801615,0,0.64183841918363,0.252697211763798,0.760437899670719,0.377252682772152,0.37456602987953,0.0640251524048693,0,0,0.115884325944855,0.38581844092741,0,0,0,0.354951612318675,0.238436189947321,0,0.376437521661322,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0.385813221962283,0,0,0.429742108096597,0,0.220591419119515,0 | |||
|short_description=p3@Kctd8 | |||
}} |
Revision as of 13:48, 4 August 2015
Short description: | p3@Kctd8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Kctd8_5end |
Coexpression cluster: | MCL_coexpression_mm9:401 |
Association with transcript: | 0bp_to_ENSMUST00000054095, NM_175519, uc008xqj.1_5end |
EntrezGene: | 243043 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.61e-22 | 23 |
neuroblast (sensu Vertebrata) | 1.61e-22 | 23 |
neuron | 8.51e-15 | 33 |
neuronal stem cell | 8.51e-15 | 33 |
neuroblast | 8.51e-15 | 33 |
electrically signaling cell | 8.51e-15 | 33 |
electrically responsive cell | 4.57e-12 | 39 |
electrically active cell | 4.57e-12 | 39 |
neural cell | 1.13e-10 | 43 |
ectodermal cell | 2.31e-10 | 44 |
neurectodermal cell | 2.31e-10 | 44 |
raphe nuclei neuron | 8.68e-10 | 3 |
neuron of the substantia nigra | 1.06e-09 | 3 |
granule cell | 2.53e-09 | 3 |
neuron of the ventral spinal cord | 4.87e-09 | 3 |
neuron of the dorsal spinal cord | 3.51e-07 | 2 |