FFCP PHASE1:Mm9::chr19:8876976..8877011,+: Difference between revisions
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{{FFCP|EntrezGene=75291|HGNC=|UniProt=Q91X45|association_with_transcript=0bp_to_ENSMUST00000088094,NM_133759,uc008gnb.1_5end|description=CAGE_peak_1_at_Zbtb3_5end|id=chr19:8876976..8877011,+|ontology_enrichment_celltype=CL:0002319!1.20e-10!43;CL:0000221!1.21e-10!44;CL:0000133!1.21e-10!44;CL:0000055!1.88e-09!50;CL:0000117!2.94e-09!23;CL:0000337!2.94e-09!23;CL:0000540!6.83e-09!33;CL:0000047!6.83e-09!33;CL:0000031!6.83e-09!33;CL:0000404!6.83e-09!33;CL:0000393!1.88e-08!39;CL:0000211!1.88e-08!39|ontology_enrichment_celltype_v019_2=CL:0002319,8.74e-11,43;CL:0000221,8.88e-11,44;CL:0000133,8.88e-11,44;CL:0000117,2.07e-09,23;CL:0000337,2.07e-09,23;CL:0000540,5.06e-09,33;CL:0000047,5.06e-09,33;CL:0000031,5.06e-09,33;CL:0000404,5.06e-09,33;CL:0000393,1.43e-08,39;CL:0000211,1.43e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!6.39e-19!75;UBERON:0001016!6.39e-19!75;UBERON:0001017!5.18e-18!73;UBERON:0005743!5.18e-18!73;UBERON:0004121!7.43e-16!102;UBERON:0000924!7.43e-16!102;UBERON:0006601!7.43e-16!102;UBERON:0002346!1.04e-14!71;UBERON:0003075!1.04e-14!71;UBERON:0007284!1.04e-14!71;UBERON:0001049!1.67e-14!52;UBERON:0005068!1.67e-14!52;UBERON:0006241!1.67e-14!52;UBERON:0007135!1.67e-14!52;UBERON:0000955!4.63e-13!50;UBERON:0006238!4.63e-13!50;UBERON:0000033!8.87e-13!63;UBERON:0002616!1.75e-12!49;UBERON:0003056!3.81e-11!49;UBERON:0003080!1.94e-10!40;UBERON:0002780!2.82e-10!39;UBERON:0001890!2.82e-10!39;UBERON:0006240!2.82e-10!39;UBERON:0002020!1.42e-09!34;UBERON:0000153!6.84e-09!94;UBERON:0002791!2.88e-08!29;UBERON:0003528!2.88e-08!29;UBERON:0001893!2.88e-08!29;UBERON:0007811!1.10e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.71e-19,75;UBERON:0001017,3.05e-18,73;UBERON:0004121,3.77e-16,95;UBERON:0000924,3.77e-16,95;UBERON:0006601,3.77e-16,95;UBERON:0002346,2.44e-15,64;UBERON:0003075,2.44e-15,64;UBERON:0007284,2.44e-15,64;UBERON:0010314,3.27e-15,92;UBERON:0001049,1.29e-14,52;UBERON:0005068,1.29e-14,52;UBERON:0006241,1.29e-14,52;UBERON:0007135,1.29e-14,52;UBERON:0000073,4.04e-14,54;UBERON:0010371,1.33e-13,73;UBERON:0000955,1.97e-13,47;UBERON:0006238,1.97e-13,47;UBERON:0002616,7.70e-13,46;UBERON:0003056,3.09e-11,49;UBERON:0003080,1.58e-10,40;UBERON:0002780,2.29e-10,39;UBERON:0001890,2.29e-10,39;UBERON:0006240,2.29e-10,39;UBERON:0002020,1.31e-09,34;UBERON:0003528,2.69e-08,29;UBERON:0002791,2.69e-08,29;UBERON:0001893,2.69e-08,29|phase1_expression=3.52327463630547,1.39590163055744,0.454999239389536,0.60492842261366,0.500895729946347,0.839396359559449,1.40167584357315,1.29123323441576,0.422366166455,0.468129052643987,2.22583358693156,2.15384829287408,1.54080656938085,2.09808965805594,1.66554880907831,2.02475267389826,1.39912375625629,5.52058789376916,3.01651753932625,3.81950686618227,1.53077922271926,1.88652807281682,4.70159620450084,2.23989391910769,1.37645568640302,1.14846392823004,0.86152399231815,1.50829862880122,0.380046838912748,0.252030129759931,2.43903561720835,1.90509202037889,3.69038872550742,0,0.866554859253824,1.82858109894342,1.63335485009895,2.92972141515835,3.906676722619,3.14114246384279,1.17646297606203,0,0.971020706062307,2.26614272356039,2.02753862439029,3.67093504323363,5.47673941043627,4.14247797122848,1.09843091367236,1.94429899074283,2.79972843250725,4.31257693094915,1.17447824240415,0,0,1.54355661621568,2.57880095944881,2.57836046138721,5.86717736492834,8.99284664762456,4.43681982454325,2.37191172448392,4.4464739805557,3.1496490104849,11.8663963508037,4.9733608046227,3.59520132622086,2.68952813725088,5.18448061542388,4.3201900266141,3.36519938162211,4.85606673486466,3.75476519617743,3.79721477566358,4.40889166683887,6.43453150627015,0,3.06449611404451,4.6081959976873,4.48413378282659,6.12967212136145,5.73004707612436,2.51264699101243,4.50210088025344,3.81995619442025,1.76777151284201,3.70166370077668,4.28718725398191,4.16494063332512,3.55186332501892,2.31891590961342,0,0,0,0,0,1.54488862144927,2.21559419351475,3.37721805983729,4.24007489412408,2.53518155598025,2.56652954828636,0,0,1.29894624606728,1.26679932737549,0,0.45673551887624,3.10725460376606,2.07818994690755,2.60227990149204,2.74018930480927,3.68984795609694,2.11011696773672,1.17588707135705,2.26199864393416,0.988779870937496,1.59059292611903,1.76922110389975,1.29413479957927,1.98757366614354,2.90925151881133,5.59175283654366,6.14839673724249,3.14170060220183,0.766371165625774,0.239630249011841,0,1.14363204365758,2.99581278809645,4.11750542536764,4.14659361972453,3.47648640384553,3.58001640262463,6.02585329222724,3.73154905055843,1.12023300235348,1.11966273549084,1.51633655060205,1.89397670297827,3.6433724029557,4.82794419310293,1.98068342785884,3.0140963567143,2.17716797284249,3.20284300712124,4.77878795254617,1.81092359517311,4.52692785158969,2.45837904218165,3.51902248327898,2.84954452155847,2.78047249225598,1.74126083261083,3.2925141825271,0.995171334092466,2.1066395619397,0.772043721344145,0.568326998791185,2.48550927042602,2.81431271977315,2.70093092191522,3.551171033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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:75291 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q91X45 | |||
|association_with_transcript=0bp_to_ENSMUST00000088094,NM_133759,uc008gnb.1_5end | |||
|cluster_id=chr19:8876976..8877011,+ | |||
|description=CAGE_peak_1_at_Zbtb3_5end | |||
|id=chr19:8876976..8877011,+ | |||
|ontology_enrichment_celltype=CL:0002319!1.20e-10!43;CL:0000221!1.21e-10!44;CL:0000133!1.21e-10!44;CL:0000055!1.88e-09!50;CL:0000117!2.94e-09!23;CL:0000337!2.94e-09!23;CL:0000540!6.83e-09!33;CL:0000047!6.83e-09!33;CL:0000031!6.83e-09!33;CL:0000404!6.83e-09!33;CL:0000393!1.88e-08!39;CL:0000211!1.88e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,8.74e-11,43;CL:0000221,8.88e-11,44;CL:0000133,8.88e-11,44;CL:0000117,2.07e-09,23;CL:0000337,2.07e-09,23;CL:0000540,5.06e-09,33;CL:0000047,5.06e-09,33;CL:0000031,5.06e-09,33;CL:0000404,5.06e-09,33;CL:0000393,1.43e-08,39;CL:0000211,1.43e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.39e-19!75;UBERON:0001016!6.39e-19!75;UBERON:0001017!5.18e-18!73;UBERON:0005743!5.18e-18!73;UBERON:0004121!7.43e-16!102;UBERON:0000924!7.43e-16!102;UBERON:0006601!7.43e-16!102;UBERON:0002346!1.04e-14!71;UBERON:0003075!1.04e-14!71;UBERON:0007284!1.04e-14!71;UBERON:0001049!1.67e-14!52;UBERON:0005068!1.67e-14!52;UBERON:0006241!1.67e-14!52;UBERON:0007135!1.67e-14!52;UBERON:0000955!4.63e-13!50;UBERON:0006238!4.63e-13!50;UBERON:0000033!8.87e-13!63;UBERON:0002616!1.75e-12!49;UBERON:0003056!3.81e-11!49;UBERON:0003080!1.94e-10!40;UBERON:0002780!2.82e-10!39;UBERON:0001890!2.82e-10!39;UBERON:0006240!2.82e-10!39;UBERON:0002020!1.42e-09!34;UBERON:0000153!6.84e-09!94;UBERON:0002791!2.88e-08!29;UBERON:0003528!2.88e-08!29;UBERON:0001893!2.88e-08!29;UBERON:0007811!1.10e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.71e-19,75;UBERON:0001017,3.05e-18,73;UBERON:0004121,3.77e-16,95;UBERON:0000924,3.77e-16,95;UBERON:0006601,3.77e-16,95;UBERON:0002346,2.44e-15,64;UBERON:0003075,2.44e-15,64;UBERON:0007284,2.44e-15,64;UBERON:0010314,3.27e-15,92;UBERON:0001049,1.29e-14,52;UBERON:0005068,1.29e-14,52;UBERON:0006241,1.29e-14,52;UBERON:0007135,1.29e-14,52;UBERON:0000073,4.04e-14,54;UBERON:0010371,1.33e-13,73;UBERON:0000955,1.97e-13,47;UBERON:0006238,1.97e-13,47;UBERON:0002616,7.70e-13,46;UBERON:0003056,3.09e-11,49;UBERON:0003080,1.58e-10,40;UBERON:0002780,2.29e-10,39;UBERON:0001890,2.29e-10,39;UBERON:0006240,2.29e-10,39;UBERON:0002020,1.31e-09,34;UBERON:0003528,2.69e-08,29;UBERON:0002791,2.69e-08,29;UBERON:0001893,2.69e-08,29 | |||
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| |||
|short_description=p1@Zbtb3 | |||
}} |
Revision as of 13:54, 4 August 2015
Short description: | p1@Zbtb3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Zbtb3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000088094, NM_133759, uc008gnb.1_5end |
EntrezGene: | 75291 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 8.74e-11 | 43 |
ectodermal cell | 8.88e-11 | 44 |
neurectodermal cell | 8.88e-11 | 44 |
CNS neuron (sensu Vertebrata) | 2.07e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.07e-09 | 23 |
neuron | 5.06e-09 | 33 |
neuronal stem cell | 5.06e-09 | 33 |
neuroblast | 5.06e-09 | 33 |
electrically signaling cell | 5.06e-09 | 33 |
electrically responsive cell | 1.43e-08 | 39 |
electrically active cell | 1.43e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
nervous system | 3.71e-19 | 75 |
central nervous system | 3.05e-18 | 73 |
ectoderm-derived structure | 3.77e-16 | 95 |
ectoderm | 3.77e-16 | 95 |
presumptive ectoderm | 3.77e-16 | 95 |
neurectoderm | 2.44e-15 | 64 |
neural plate | 2.44e-15 | 64 |
presumptive neural plate | 2.44e-15 | 64 |
structure with developmental contribution from neural crest | 3.27e-15 | 92 |
neural tube | 1.29e-14 | 52 |
neural rod | 1.29e-14 | 52 |
future spinal cord | 1.29e-14 | 52 |
neural keel | 1.29e-14 | 52 |
regional part of nervous system | 4.04e-14 | 54 |
ecto-epithelium | 1.33e-13 | 73 |
brain | 1.97e-13 | 47 |
future brain | 1.97e-13 | 47 |
regional part of brain | 7.70e-13 | 46 |
pre-chordal neural plate | 3.09e-11 | 49 |
anterior neural tube | 1.58e-10 | 40 |
regional part of forebrain | 2.29e-10 | 39 |
forebrain | 2.29e-10 | 39 |
future forebrain | 2.29e-10 | 39 |
gray matter | 1.31e-09 | 34 |
brain grey matter | 2.69e-08 | 29 |
regional part of telencephalon | 2.69e-08 | 29 |
telencephalon | 2.69e-08 | 29 |