FFCP PHASE1:Mm9::chr14:65059871..65059882,-: Difference between revisions
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{{FFCP|EntrezGene=110265|HGNC=|MCL_coexpression_id=3|UniProt=|association_with_transcript=0bp_to_NM_001253712,uc007uii.1_5end|description=CAGE_peak_7_at_Msra_5end|id=chr14:65059871..65059882,-|ontology_enrichment_celltype=CL:0000117!1.70e-14!23;CL:0000337!1.70e-14!23;CL:0000540!1.11e-08!33;CL:0000047!1.11e-08!33;CL:0000031!1.11e-08!33;CL:0000404!1.11e-08!33|ontology_enrichment_celltype_v019_2=CL:0000120,4.72e-19,3;CL:0000117,1.52e-12,23;CL:0000337,1.52e-12,23;CL:0002613,2.90e-09,3;CL:0000540,1.39e-08,33;CL:0000047,1.39e-08,33;CL:0000031,1.39e-08,33;CL:0000404,1.39e-08,33;CL:0000393,3.57e-07,39;CL:0000211,3.57e-07,39;CL:0000355,4.50e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,4.00e-20,3;DOID:4045,4.00e-20,3;DOID:0050686,2.32e-10,6|ontology_enrichment_uberon=UBERON:0002791!5.98e-17!29;UBERON:0003528!5.98e-17!29;UBERON:0001893!5.98e-17!29;UBERON:0002020!1.69e-16!34;UBERON:0000955!6.00e-14!50;UBERON:0006238!6.00e-14!50;UBERON:0002616!1.93e-13!49;UBERON:0000033!5.22e-13!63;UBERON:0003056!2.64e-12!49;UBERON:0007811!2.98e-12!86;UBERON:0002780!4.56e-12!39;UBERON:0001890!4.56e-12!39;UBERON:0006240!4.56e-12!39;UBERON:0001017!7.50e-12!73;UBERON:0005743!7.50e-12!73;UBERON:0003080!1.61e-11!40;UBERON:0001049!2.01e-11!52;UBERON:0005068!2.01e-11!52;UBERON:0006241!2.01e-11!52;UBERON:0007135!2.01e-11!52;UBERON:0000153!2.91e-11!94;UBERON:0000073!3.69e-11!75;UBERON:0001016!3.69e-11!75;UBERON:0000956!1.75e-10!21;UBERON:0001869!1.75e-10!21;UBERON:0000203!1.75e-10!21;UBERON:0002346!6.79e-09!71;UBERON:0003075!6.79e-09!71;UBERON:0007284!6.79e-09!71;UBERON:0002619!1.60e-08!17;UBERON:0002420!4.73e-08!8;UBERON:0007245!4.73e-08!8;UBERON:0010009!4.73e-08!8;UBERON:0010011!4.73e-08!8;UBERON:0000454!4.73e-08!8;UBERON:0004121!1.49e-07!102;UBERON:0000924!1.49e-07!102;UBERON:0006601!1.49e-07!102;UBERON:0002021!7.80e-07!10;UBERON:0000411!7.80e-07!10;UBERON:0001950!7.80e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002420,1.15e-12,8;UBERON:0007245,1.15e-12,8;UBERON:0010009,1.15e-12,8;UBERON:0010011,1.15e-12,8;UBERON:0000454,1.15e-12,8;UBERON:0000369,7.79e-12,5;UBERON:0002435,7.79e-12,5;UBERON:0000204,7.79e-12,5;UBERON:0010082,7.79e-12,5;UBERON:0001134,4.50e-07,9;UBERON:0002036,4.50e-07,9;UBERON:0002385,4.50e-07,9;UBERON:0000486,4.50e-07,9;UBERON:0007503,4.50e-07,9;UBERON:0001015,4.50e-07,9;UBERON:0002329,4.50e-07,9;UBERON:0003082,4.50e-07,9;UBERON:0003059,4.50e-07,9;UBERON:0007282,4.50e-07,9;UBERON:0004290,4.50e-07,9;UBERON:0009618,4.50e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0.281577444303333,0.234064526321993,0,0,0.684802919724823,0.262261207256992,0,0.202475267389826,0,0.157731082679119,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.1597968602132,19.533383613095,9.94695113550217,29.4115744015507,28.6879103682547,17.4783727091215,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0.336093799142464,0,0,0,1.61853168687678,2.64495489636016,1.26766280701236,0,0,0,0,0,0,0.384218305321555,0.311068836925433,0.945041568321835,0.210324961351382,0.285650984403804,0,0.979926393719632,0.670918297127655,0.919218786610021,1.10115880999389,0.510749352340751,0.307213066512487,1.71452174049252,0.731901148819277,2.08365348222704,1.3959149950069,0.56276261003168,0.45839474333043,0,0.142371680799103,0.372798891650601,0,0,0,0,0.679971333707751,0,0.649776417447669,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0.220841518460394,0,0,0,0.41889341362691,0,0.718890747035522,0.599902730993408,0,0,0.457500602818626,1.7591609295801,0.173824320192276,0,0.41557608911912,0,0,0.248813941220186,0,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0.136072998302656,0.768682321709099,0.187403449119458,0,0,0.378212160335639,0,0,0,0,0,0,0.702213187313235,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0.203651327845314,0,0,0,0,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0.287696137450811,0.486405680325106,0,0,0.372140947668503,0.624075346229121,0,0,0,0,0,0,0,0,0,0,0.390267295715598,0,0,0,0.327726629431476,0,0,0,0.54390568381871,0,0,0.642202359951168,0.234423373184406,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412773735926445,0.925972636848558,0.376736914009382,0,0,0.169978429993855,0,0.414599921413271,0,0,0,0,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0.149516546043979,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0.295379054349154,0,0.15241361331,0,0.0974578807397524,0.192423683280659,0.701261413089414,0,0,0,0,0,0,0,0.214368379079066,0.501572104035363,0,0.460325236507177,0.572895513439397,0.68741272937475,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,0.103787347584177,0,0,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0,0.114870937911227,0,0,0,0,0.147198920134397,0,0,0.476872379894642,0.145346416632329,0,0,0.182927972872773,0,0.135804113845862,0,0,0.29551344712669,0,0,0.192906610981141,0,0.467863216890817,0,0,0,0|short_description=p7@Msra}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:110265 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_NM_001253712,uc007uii.1_5end | |||
|cluster_id=chr14:65059871..65059882,- | |||
|description=CAGE_peak_7_at_Msra_5end | |||
|id=chr14:65059871..65059882,- | |||
|ontology_enrichment_celltype=CL:0000117!1.70e-14!23;CL:0000337!1.70e-14!23;CL:0000540!1.11e-08!33;CL:0000047!1.11e-08!33;CL:0000031!1.11e-08!33;CL:0000404!1.11e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000120,4.72e-19,3;CL:0000117,1.52e-12,23;CL:0000337,1.52e-12,23;CL:0002613,2.90e-09,3;CL:0000540,1.39e-08,33;CL:0000047,1.39e-08,33;CL:0000031,1.39e-08,33;CL:0000404,1.39e-08,33;CL:0000393,3.57e-07,39;CL:0000211,3.57e-07,39;CL:0000355,4.50e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.00e-20,3;DOID:4045,4.00e-20,3;DOID:0050686,2.32e-10,6 | |||
|ontology_enrichment_uberon=UBERON:0002791!5.98e-17!29;UBERON:0003528!5.98e-17!29;UBERON:0001893!5.98e-17!29;UBERON:0002020!1.69e-16!34;UBERON:0000955!6.00e-14!50;UBERON:0006238!6.00e-14!50;UBERON:0002616!1.93e-13!49;UBERON:0000033!5.22e-13!63;UBERON:0003056!2.64e-12!49;UBERON:0007811!2.98e-12!86;UBERON:0002780!4.56e-12!39;UBERON:0001890!4.56e-12!39;UBERON:0006240!4.56e-12!39;UBERON:0001017!7.50e-12!73;UBERON:0005743!7.50e-12!73;UBERON:0003080!1.61e-11!40;UBERON:0001049!2.01e-11!52;UBERON:0005068!2.01e-11!52;UBERON:0006241!2.01e-11!52;UBERON:0007135!2.01e-11!52;UBERON:0000153!2.91e-11!94;UBERON:0000073!3.69e-11!75;UBERON:0001016!3.69e-11!75;UBERON:0000956!1.75e-10!21;UBERON:0001869!1.75e-10!21;UBERON:0000203!1.75e-10!21;UBERON:0002346!6.79e-09!71;UBERON:0003075!6.79e-09!71;UBERON:0007284!6.79e-09!71;UBERON:0002619!1.60e-08!17;UBERON:0002420!4.73e-08!8;UBERON:0007245!4.73e-08!8;UBERON:0010009!4.73e-08!8;UBERON:0010011!4.73e-08!8;UBERON:0000454!4.73e-08!8;UBERON:0004121!1.49e-07!102;UBERON:0000924!1.49e-07!102;UBERON:0006601!1.49e-07!102;UBERON:0002021!7.80e-07!10;UBERON:0000411!7.80e-07!10;UBERON:0001950!7.80e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002420,1.15e-12,8;UBERON:0007245,1.15e-12,8;UBERON:0010009,1.15e-12,8;UBERON:0010011,1.15e-12,8;UBERON:0000454,1.15e-12,8;UBERON:0000369,7.79e-12,5;UBERON:0002435,7.79e-12,5;UBERON:0000204,7.79e-12,5;UBERON:0010082,7.79e-12,5;UBERON:0001134,4.50e-07,9;UBERON:0002036,4.50e-07,9;UBERON:0002385,4.50e-07,9;UBERON:0000486,4.50e-07,9;UBERON:0007503,4.50e-07,9;UBERON:0001015,4.50e-07,9;UBERON:0002329,4.50e-07,9;UBERON:0003082,4.50e-07,9;UBERON:0003059,4.50e-07,9;UBERON:0007282,4.50e-07,9;UBERON:0004290,4.50e-07,9;UBERON:0009618,4.50e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.281577444303333,0.234064526321993,0,0,0.684802919724823,0.262261207256992,0,0.202475267389826,0,0.157731082679119,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.1597968602132,19.533383613095,9.94695113550217,29.4115744015507,28.6879103682547,17.4783727091215,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0.336093799142464,0,0,0,1.61853168687678,2.64495489636016,1.26766280701236,0,0,0,0,0,0,0.384218305321555,0.311068836925433,0.945041568321835,0.210324961351382,0.285650984403804,0,0.979926393719632,0.670918297127655,0.919218786610021,1.10115880999389,0.510749352340751,0.307213066512487,1.71452174049252,0.731901148819277,2.08365348222704,1.3959149950069,0.56276261003168,0.45839474333043,0,0.142371680799103,0.372798891650601,0,0,0,0,0.679971333707751,0,0.649776417447669,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0.220841518460394,0,0,0,0.41889341362691,0,0.718890747035522,0.599902730993408,0,0,0.457500602818626,1.7591609295801,0.173824320192276,0,0.41557608911912,0,0,0.248813941220186,0,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0.136072998302656,0.768682321709099,0.187403449119458,0,0,0.378212160335639,0,0,0,0,0,0,0.702213187313235,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0.203651327845314,0,0,0,0,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0.287696137450811,0.486405680325106,0,0,0.372140947668503,0.624075346229121,0,0,0,0,0,0,0,0,0,0,0.390267295715598,0,0,0,0.327726629431476,0,0,0,0.54390568381871,0,0,0.642202359951168,0.234423373184406,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412773735926445,0.925972636848558,0.376736914009382,0,0,0.169978429993855,0,0.414599921413271,0,0,0,0,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0.149516546043979,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0.295379054349154,0,0.15241361331,0,0.0974578807397524,0.192423683280659,0.701261413089414,0,0,0,0,0,0,0,0.214368379079066,0.501572104035363,0,0.460325236507177,0.572895513439397,0.68741272937475,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,0.103787347584177,0,0,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0,0.114870937911227,0,0,0,0,0.147198920134397,0,0,0.476872379894642,0.145346416632329,0,0,0.182927972872773,0,0.135804113845862,0,0,0.29551344712669,0,0,0.192906610981141,0,0.467863216890817,0,0,0,0 | |||
|short_description=p7@Msra | |||
}} |
Revision as of 15:42, 4 August 2015
Short description: | p7@Msra |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Msra_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 0bp_to_NM_001253712, uc007uii.1_5end |
EntrezGene: | 110265 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granule cell | 4.72e-19 | 3 |
CNS neuron (sensu Vertebrata) | 1.52e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.52e-12 | 23 |
striatum neuron | 2.90e-09 | 3 |
neuron | 1.39e-08 | 33 |
neuronal stem cell | 1.39e-08 | 33 |
neuroblast | 1.39e-08 | 33 |
electrically signaling cell | 1.39e-08 | 33 |
electrically responsive cell | 3.57e-07 | 39 |
electrically active cell | 3.57e-07 | 39 |
multi-potent skeletal muscle stem cell | 4.50e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
basal ganglion | 1.15e-12 | 8 |
nuclear complex of neuraxis | 1.15e-12 | 8 |
aggregate regional part of brain | 1.15e-12 | 8 |
collection of basal ganglia | 1.15e-12 | 8 |
cerebral subcortex | 1.15e-12 | 8 |
corpus striatum | 7.79e-12 | 5 |
striatum | 7.79e-12 | 5 |
ventral part of telencephalon | 7.79e-12 | 5 |
future corpus striatum | 7.79e-12 | 5 |
skeletal muscle tissue | 4.50e-07 | 9 |
striated muscle tissue | 4.50e-07 | 9 |
muscle tissue | 4.50e-07 | 9 |
multilaminar epithelium | 4.50e-07 | 9 |
epithelial vesicle | 4.50e-07 | 9 |
musculature | 4.50e-07 | 9 |
somite | 4.50e-07 | 9 |
myotome | 4.50e-07 | 9 |
presomitic mesoderm | 4.50e-07 | 9 |
presumptive segmental plate | 4.50e-07 | 9 |
dermomyotome | 4.50e-07 | 9 |
trunk paraxial mesoderm | 4.50e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.00e-20 | 3 |
muscle cancer | 4.00e-20 | 3 |
organ system cancer | 2.32e-10 | 6 |