FFCP PHASE1:Mm9::chr10:80962367..80962388,-: Difference between revisions
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{{FFCP|EntrezGene=13611|HGNC=|MCL_coexpression_id=36|UniProt=Q9Z0L1|association_with_transcript=63bp_to_ENSMUST00000053646_5end|description=CAGE_peak_1_at_S1pr4_5end|id=chr10:80962367..80962388,-|ontology_enrichment_celltype=CL:0000988!1.60e-10!32;CL:0002032!1.60e-10!32;CL:0000037!1.60e-10!32;CL:0000566!1.60e-10!32;CL:0000837!1.60e-10!32;CL:0000542!2.14e-08!13;CL:0000051!2.14e-08!13;CL:0000838!2.73e-08!12;CL:0000084!1.46e-07!11;CL:0000827!1.46e-07!11;CL:0002031!5.34e-07!25;CL:0000791!7.16e-07!9;CL:0000789!7.16e-07!9;CL:0002420!7.16e-07!9;CL:0002419!7.16e-07!9;CL:0000790!7.16e-07!9|ontology_enrichment_celltype_v019_2=CL:0000988,1.19e-15,32;CL:0002032,1.19e-15,32;CL:0000037,1.19e-15,32;CL:0000837,1.19e-15,32;CL:0002320,3.81e-10,46;CL:0000134,3.81e-10,46;CL:0000838,5.25e-10,12;CL:0002031,5.62e-10,25;CL:0000542,4.58e-09,13;CL:0000051,4.58e-09,13;CL:0000791,1.10e-08,9;CL:0000789,1.10e-08,9;CL:0002420,1.10e-08,9;CL:0002419,1.10e-08,9;CL:0000790,1.10e-08,9;CL:0000084,1.20e-08,11;CL:0000827,1.20e-08,11;CL:0000049,5.70e-08,19;CL:0000219,8.53e-08,54;CL:0000624,3.21e-07,8;CL:0000553,6.96e-07,6;CL:0000556,6.96e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.68e-11!48;UBERON:0002405!2.57e-10!70;UBERON:0002390!4.29e-10!45;UBERON:0003061!4.29e-10!45;UBERON:0004177!1.25e-09!29;UBERON:0001004!2.05e-09!42;UBERON:0000065!5.58e-09!41;UBERON:0005057!5.20e-08!51;UBERON:0003408!4.93e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.43e-15,48;UBERON:0002405,4.43e-15,48;UBERON:0002390,8.19e-14,45;UBERON:0003061,8.19e-14,45;UBERON:0002384,3.81e-10,46;UBERON:0004177,1.07e-09,29;UBERON:0005057,1.07e-09,29;UBERON:0002106,3.47e-08,6;UBERON:0004457,3.47e-08,6;UBERON:0000042,3.47e-08,6;UBERON:0004854,3.47e-08,6;UBERON:0009034,3.47e-08,6;UBERON:0002095,3.47e-08,6;UBERON:0004782,3.47e-08,6;UBERON:0003281,3.47e-08,6;UBERON:0009664,3.47e-08,6;UBERON:0002296,3.47e-08,6;UBERON:0005602,3.47e-08,6;UBERON:0001179,3.47e-08,6;UBERON:0006293,3.47e-08,6;UBERON:0001004,5.54e-08,42;UBERON:0001041,1.32e-07,80;UBERON:0000065,2.45e-07,41;UBERON:0000077,2.49e-07,35|phase1_expression=0,0,0,0,0,0,0,34.9924206526672,3.09735188733667,4.44722600011788,0.513653904676515,0.8774937489487,17.8048759128454,18.9702273249224,3.33109761815663,5.06188168474565,0.699561878128147,19.2431920868525,16.7279608999001,18.2487550273153,0.850432901510698,2.08510997521859,0.522399578277871,0.47997726838022,1.60586496747019,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,41.016099812217,22.6587249911902,10.9939986234498,24.1174910092716,28.0048648832963,31.558172947025,0,0,0,0,0,0,0,0,0,22.4828692117367,29.0144856804538,36.6342241065286,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0,0.220868540951614,0.122490799214954,0.287536413054709,0,0,0.127687338085188,0,0,0.0914876436024097,0,0.279182999001381,0,0,0,0,0,0.075726193333184,0,0,1.72084775396277,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,0.68510327831436,4.14300613835475,0.29688427812965,0,0,0.230615497256059,0.150722640552623,0.352766121407114,0.753999547978053,0.494389935468748,0.289198713839823,8.84610551949874,0.647067399789637,2.42925670306433,1.93950101254089,1.86391761218122,0,0.209446706813455,0.255457055208591,5.15205035375457,5.39912457894067,3.81210681219194,0,0.457500602818626,0,0.347648640384553,0.255715457330331,0.20778804455956,0.648965052271031,0.203678727700633,2.36373244159177,0,0,0,0.229902104433473,0,0.150704817835715,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,2.80885274925294,4.11756651383544,5.96743348730745,0,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0.329119699826961,0.164167464079095,0.243206428637567,0.146199987425332,0,0,0.420579897128254,0.102904612379284,0,0.264450566663544,0.426576501070468,0,0,0.403367049246685,0,0,0,0.164698954724011,0,0.397912944082302,0,0,0,0.398282546508734,0.189667900953082,0,1.1270773567308,0,0,0.210407459670956,0.316182685621286,0,0,0.246794327843601,0,0.333690211432188,0,0.449724224769707,0.202860121388503,0.482354319504834,0.763877555344259,0.863088412352432,1.94562272130042,1.09824565275233,0,0.372140947668503,1.24815069245824,0.505157755894224,0.179397413521912,0,6.65111484599777,0.189491411770485,0.162964976442026,0.169745085775188,0.234690248288502,0.670025029767263,1.90434912708811,2.34160377429359,1.26108115284953,0.44292937929755,1.43509291791738,3.11340297959902,3.10832967358612,2.89298117163023,0,0,0.491764273019036,0.827810238914197,0.160550589987792,0.117211686592203,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0.178065603667255,0.162886959353576,0.659880491890142,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0.177340233642274,0,0,0,0.23467170806371,0.42366414172764,0,0.16488625294148,0.322928853391811,0.0603129249281559,0.119372344003136,0,0.291480836629851,0.18542530201051,4.61351378154202,1.65109494370578,1.66675074632741,3.20226376907975,4.37421528707281,4.11800711771741,5.77926661979108,4.89830083132803,6.49539876880792,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0.259229946583586,1.86401793926078,0,0,0,0.388902376688095,0.258319646955462,0,0,0,0,0,0.288030006257865,0.632022241256357,0.405450430580328,0.102710957164827,0.51968329191118,1.07416017400489,0.596044064343795,1.9231271923195,2.36303243479324,0.807731599585181,0.762068066549998,1.00826185136841,1.65678397257579,1.6356013078856,1.63627663054197,0.226730383615211,0,0,0,0.965947970160952,0.375364950902364,0.36630324853453,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.44449345560323,0,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.192075457214608,0.114870937911227,0,0.115884325944855,0,0,0,0,0,0,0.290692833264657,0.188218760830661,0,0,0,0,0,0.118635018124174,0.29551344712669,0,0.464810523557898,0.192906610981141,0,0.233931608445408,0.859484216193193,0.57386499620653,0.441182838239031,1.39120701372253|short_description=p1@S1pr4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13611 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9Z0L1 | |||
|association_with_transcript=63bp_to_ENSMUST00000053646_5end | |||
|cluster_id=chr10:80962367..80962388,- | |||
|description=CAGE_peak_1_at_S1pr4_5end | |||
|id=chr10:80962367..80962388,- | |||
|ontology_enrichment_celltype=CL:0000988!1.60e-10!32;CL:0002032!1.60e-10!32;CL:0000037!1.60e-10!32;CL:0000566!1.60e-10!32;CL:0000837!1.60e-10!32;CL:0000542!2.14e-08!13;CL:0000051!2.14e-08!13;CL:0000838!2.73e-08!12;CL:0000084!1.46e-07!11;CL:0000827!1.46e-07!11;CL:0002031!5.34e-07!25;CL:0000791!7.16e-07!9;CL:0000789!7.16e-07!9;CL:0002420!7.16e-07!9;CL:0002419!7.16e-07!9;CL:0000790!7.16e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.19e-15,32;CL:0002032,1.19e-15,32;CL:0000037,1.19e-15,32;CL:0000837,1.19e-15,32;CL:0002320,3.81e-10,46;CL:0000134,3.81e-10,46;CL:0000838,5.25e-10,12;CL:0002031,5.62e-10,25;CL:0000542,4.58e-09,13;CL:0000051,4.58e-09,13;CL:0000791,1.10e-08,9;CL:0000789,1.10e-08,9;CL:0002420,1.10e-08,9;CL:0002419,1.10e-08,9;CL:0000790,1.10e-08,9;CL:0000084,1.20e-08,11;CL:0000827,1.20e-08,11;CL:0000049,5.70e-08,19;CL:0000219,8.53e-08,54;CL:0000624,3.21e-07,8;CL:0000553,6.96e-07,6;CL:0000556,6.96e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.68e-11!48;UBERON:0002405!2.57e-10!70;UBERON:0002390!4.29e-10!45;UBERON:0003061!4.29e-10!45;UBERON:0004177!1.25e-09!29;UBERON:0001004!2.05e-09!42;UBERON:0000065!5.58e-09!41;UBERON:0005057!5.20e-08!51;UBERON:0003408!4.93e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.43e-15,48;UBERON:0002405,4.43e-15,48;UBERON:0002390,8.19e-14,45;UBERON:0003061,8.19e-14,45;UBERON:0002384,3.81e-10,46;UBERON:0004177,1.07e-09,29;UBERON:0005057,1.07e-09,29;UBERON:0002106,3.47e-08,6;UBERON:0004457,3.47e-08,6;UBERON:0000042,3.47e-08,6;UBERON:0004854,3.47e-08,6;UBERON:0009034,3.47e-08,6;UBERON:0002095,3.47e-08,6;UBERON:0004782,3.47e-08,6;UBERON:0003281,3.47e-08,6;UBERON:0009664,3.47e-08,6;UBERON:0002296,3.47e-08,6;UBERON:0005602,3.47e-08,6;UBERON:0001179,3.47e-08,6;UBERON:0006293,3.47e-08,6;UBERON:0001004,5.54e-08,42;UBERON:0001041,1.32e-07,80;UBERON:0000065,2.45e-07,41;UBERON:0000077,2.49e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,34.9924206526672,3.09735188733667,4.44722600011788,0.513653904676515,0.8774937489487,17.8048759128454,18.9702273249224,3.33109761815663,5.06188168474565,0.699561878128147,19.2431920868525,16.7279608999001,18.2487550273153,0.850432901510698,2.08510997521859,0.522399578277871,0.47997726838022,1.60586496747019,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,41.016099812217,22.6587249911902,10.9939986234498,24.1174910092716,28.0048648832963,31.558172947025,0,0,0,0,0,0,0,0,0,22.4828692117367,29.0144856804538,36.6342241065286,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0,0.220868540951614,0.122490799214954,0.287536413054709,0,0,0.127687338085188,0,0,0.0914876436024097,0,0.279182999001381,0,0,0,0,0,0.075726193333184,0,0,1.72084775396277,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,0.68510327831436,4.14300613835475,0.29688427812965,0,0,0.230615497256059,0.150722640552623,0.352766121407114,0.753999547978053,0.494389935468748,0.289198713839823,8.84610551949874,0.647067399789637,2.42925670306433,1.93950101254089,1.86391761218122,0,0.209446706813455,0.255457055208591,5.15205035375457,5.39912457894067,3.81210681219194,0,0.457500602818626,0,0.347648640384553,0.255715457330331,0.20778804455956,0.648965052271031,0.203678727700633,2.36373244159177,0,0,0,0.229902104433473,0,0.150704817835715,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,2.80885274925294,4.11756651383544,5.96743348730745,0,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0.329119699826961,0.164167464079095,0.243206428637567,0.146199987425332,0,0,0.420579897128254,0.102904612379284,0,0.264450566663544,0.426576501070468,0,0,0.403367049246685,0,0,0,0.164698954724011,0,0.397912944082302,0,0,0,0.398282546508734,0.189667900953082,0,1.1270773567308,0,0,0.210407459670956,0.316182685621286,0,0,0.246794327843601,0,0.333690211432188,0,0.449724224769707,0.202860121388503,0.482354319504834,0.763877555344259,0.863088412352432,1.94562272130042,1.09824565275233,0,0.372140947668503,1.24815069245824,0.505157755894224,0.179397413521912,0,6.65111484599777,0.189491411770485,0.162964976442026,0.169745085775188,0.234690248288502,0.670025029767263,1.90434912708811,2.34160377429359,1.26108115284953,0.44292937929755,1.43509291791738,3.11340297959902,3.10832967358612,2.89298117163023,0,0,0.491764273019036,0.827810238914197,0.160550589987792,0.117211686592203,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0.178065603667255,0.162886959353576,0.659880491890142,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0.177340233642274,0,0,0,0.23467170806371,0.42366414172764,0,0.16488625294148,0.322928853391811,0.0603129249281559,0.119372344003136,0,0.291480836629851,0.18542530201051,4.61351378154202,1.65109494370578,1.66675074632741,3.20226376907975,4.37421528707281,4.11800711771741,5.77926661979108,4.89830083132803,6.49539876880792,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0.259229946583586,1.86401793926078,0,0,0,0.388902376688095,0.258319646955462,0,0,0,0,0,0.288030006257865,0.632022241256357,0.405450430580328,0.102710957164827,0.51968329191118,1.07416017400489,0.596044064343795,1.9231271923195,2.36303243479324,0.807731599585181,0.762068066549998,1.00826185136841,1.65678397257579,1.6356013078856,1.63627663054197,0.226730383615211,0,0,0,0.965947970160952,0.375364950902364,0.36630324853453,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.44449345560323,0,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.192075457214608,0.114870937911227,0,0.115884325944855,0,0,0,0,0,0,0.290692833264657,0.188218760830661,0,0,0,0,0,0.118635018124174,0.29551344712669,0,0.464810523557898,0.192906610981141,0,0.233931608445408,0.859484216193193,0.57386499620653,0.441182838239031,1.39120701372253 | |||
|short_description=p1@S1pr4 | |||
}} |
Revision as of 21:31, 4 August 2015
Short description: | p1@S1pr4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_S1pr4_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 63bp_to_ENSMUST00000053646_5end |
EntrezGene: | 13611 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.19e-15 | 32 |
hematopoietic oligopotent progenitor cell | 1.19e-15 | 32 |
hematopoietic stem cell | 1.19e-15 | 32 |
hematopoietic multipotent progenitor cell | 1.19e-15 | 32 |
connective tissue cell | 3.81e-10 | 46 |
mesenchymal cell | 3.81e-10 | 46 |
lymphoid lineage restricted progenitor cell | 5.25e-10 | 12 |
hematopoietic lineage restricted progenitor cell | 5.62e-10 | 25 |
lymphocyte | 4.58e-09 | 13 |
common lymphoid progenitor | 4.58e-09 | 13 |
mature alpha-beta T cell | 1.10e-08 | 9 |
alpha-beta T cell | 1.10e-08 | 9 |
immature T cell | 1.10e-08 | 9 |
mature T cell | 1.10e-08 | 9 |
immature alpha-beta T cell | 1.10e-08 | 9 |
T cell | 1.20e-08 | 11 |
pro-T cell | 1.20e-08 | 11 |
common myeloid progenitor | 5.70e-08 | 19 |
motile cell | 8.53e-08 | 54 |
CD4-positive, alpha-beta T cell | 3.21e-07 | 8 |
megakaryocyte progenitor cell | 6.96e-07 | 6 |
megakaryocyte | 6.96e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.43e-15 | 48 |
immune system | 4.43e-15 | 48 |
hematopoietic system | 8.19e-14 | 45 |
blood island | 8.19e-14 | 45 |
connective tissue | 3.81e-10 | 46 |
hemopoietic organ | 1.07e-09 | 29 |
immune organ | 1.07e-09 | 29 |
spleen | 3.47e-08 | 6 |
cavity lining | 3.47e-08 | 6 |
serous membrane | 3.47e-08 | 6 |
gastrointestinal system mesentery | 3.47e-08 | 6 |
stomach region | 3.47e-08 | 6 |
mesentery | 3.47e-08 | 6 |
gastrointestinal system serosa | 3.47e-08 | 6 |
mesentery of stomach | 3.47e-08 | 6 |
gut mesentery | 3.47e-08 | 6 |
dorsal mesentery | 3.47e-08 | 6 |
dorsal mesogastrium | 3.47e-08 | 6 |
peritoneal cavity | 3.47e-08 | 6 |
spleen primordium | 3.47e-08 | 6 |
respiratory system | 5.54e-08 | 42 |
foregut | 1.32e-07 | 80 |
respiratory tract | 2.45e-07 | 41 |
mixed endoderm/mesoderm-derived structure | 2.49e-07 | 35 |