FFCP PHASE1:Mm9::chr10:88145766..88145770,-: Difference between revisions
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{{FFCP|EntrezGene=20728|HGNC=|MCL_coexpression_id=881|UniProt=Q6P3D7,D6RE28|association_with_transcript=0bp_to_ENSMUST00000004473,ENSMUST00000133724,ENSMUST00000144338,NM_011461,uc007grv.2,uc011xli.1_5end|description=CAGE_peak_1_at_Spic_5end|id=chr10:88145766..88145770,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000553,4.95e-07,6;CL:0000556,4.95e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!2.77e-19!70;UBERON:0005057!6.55e-15!51;UBERON:0001041!8.65e-12!92;UBERON:0002365!2.29e-11!25;UBERON:0002330!2.29e-11!25;UBERON:0000926!3.47e-11!193;UBERON:0004120!3.47e-11!193;UBERON:0006603!3.47e-11!193;UBERON:0000949!5.37e-11!72;UBERON:0002107!5.38e-11!22;UBERON:0007499!5.38e-11!22;UBERON:0006925!5.38e-11!22;UBERON:0009497!5.38e-11!22;UBERON:0000015!5.38e-11!22;UBERON:0002423!5.38e-11!22;UBERON:0006235!5.38e-11!22;UBERON:0008835!5.38e-11!22;UBERON:0003894!5.38e-11!22;UBERON:0004161!5.38e-11!22;UBERON:0008836!5.38e-11!22;UBERON:0003104!7.61e-11!131;UBERON:0009142!7.61e-11!131;UBERON:0000077!9.51e-11!97;UBERON:0005172!9.95e-11!49;UBERON:0005173!9.95e-11!49;UBERON:0002417!9.95e-11!49;UBERON:0000916!9.95e-11!49;UBERON:0002368!1.79e-10!60;UBERON:0002530!5.30e-10!65;UBERON:0009854!5.86e-10!23;UBERON:0009856!5.86e-10!23;UBERON:0002193!2.30e-09!48;UBERON:0002390!6.59e-09!45;UBERON:0003061!6.59e-09!45;UBERON:0000466!2.88e-08!79;UBERON:0009569!3.60e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.79e-13,22;UBERON:0007499,4.79e-13,22;UBERON:0006925,4.79e-13,22;UBERON:0009497,4.79e-13,22;UBERON:0000015,4.79e-13,22;UBERON:0002423,4.79e-13,22;UBERON:0006235,4.79e-13,22;UBERON:0008835,4.79e-13,22;UBERON:0003894,4.79e-13,22;UBERON:0004161,4.79e-13,22;UBERON:0008836,4.79e-13,22;UBERON:0002365,1.07e-12,25;UBERON:0002330,1.07e-12,25;UBERON:0002390,3.07e-12,45;UBERON:0003061,3.07e-12,45;UBERON:0009854,3.86e-12,23;UBERON:0009856,3.86e-12,23;UBERON:0002193,5.33e-12,48;UBERON:0002405,5.33e-12,48;UBERON:0002368,6.37e-12,60;UBERON:0000949,1.23e-11,72;UBERON:0001041,1.25e-11,80;UBERON:0002530,2.49e-11,65;UBERON:0005172,5.03e-11,49;UBERON:0005173,5.03e-11,49;UBERON:0002417,5.03e-11,49;UBERON:0000916,5.03e-11,49;UBERON:0003929,5.40e-10,55;UBERON:0005256,1.17e-08,45;UBERON:0000490,2.13e-08,66;UBERON:0004177,3.23e-08,29;UBERON:0005057,3.23e-08,29;UBERON:0002106,5.53e-07,6;UBERON:0004457,5.53e-07,6;UBERON:0000042,5.53e-07,6;UBERON:0004854,5.53e-07,6;UBERON:0009034,5.53e-07,6;UBERON:0002095,5.53e-07,6;UBERON:0004782,5.53e-07,6;UBERON:0003281,5.53e-07,6;UBERON:0009664,5.53e-07,6;UBERON:0002296,5.53e-07,6;UBERON:0005602,5.53e-07,6;UBERON:0001179,5.53e-07,6;UBERON:0006293,5.53e-07,6|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,0.645616617207881,0.140788722151667,0,0,0,0.171200729931206,0.262261207256992,55.9624399850313,50.6188168474565,76.252244715968,27.2874773034876,28.6569166235994,28.00971701867,0.765389611359628,0.0992909512008853,0,0.319984845586813,0.68822784320151,0,0.430761996159075,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0,2.09265815368454,3.906676722619,2.61761871986899,0.588231488031014,2.73218193983378,1.94204141212461,0,0,0,0,0,0,0,0,0,1.51004345451963,1.45072428402269,1.00828139742739,0,0.573066879877513,0,0,0,0,0,0,2.2497492932035,2.96659908770092,1.4209602298922,0.299600110518405,0,0,0,0,0.285650984403804,0,0,0.0958454710182364,0,0,0.255374676170375,0,0,0,0,0,0,0,0,0.142371680799103,0,0.227178579999552,0,0.579728977403356,7.74381489283248,2.03991400112325,0.539703191637817,1.94932925234301,1.34408066129201,10.5333315098814,0,0,0,0,0,0,0,0,0,0,7.4219521817389,113.155855153814,2.22663208597237,0.693941307064543,2.43572382649713,0.691846491768175,2.86373017049983,4.70354828542819,1.0053327306374,0,1.3013942122792,17.6922110389975,2.75003644910596,10.1587098491781,8.24287930329878,0,0,0,0.255457055208591,0.479260498023681,1.19980546198682,0.508280908292259,0,0,0,0,0,0,0,0,10.3257785606377,0.252722758433675,0.210441855886474,0,0,0.180062129805349,0.60281927134286,0,0,0.0937017245597288,0.258703370739016,0,0,0,0,0.278047249225598,0,0.61734640922383,0.199034266818493,0,0.51469581422943,0.284163499395593,0,0.234526059981096,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0.162137619091711,0.292399974850665,0.878200461164203,0.536825675041487,0,0,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0.444756087689741,0.760902504450237,0.949058123089023,0.329397909448022,2.01068167040216,1.59165177632921,1.36474860983384,0.898819408654221,0.648414149624083,0.199141273254367,0.189667900953082,0.571242563048644,0,0.203651327845314,0.387904974335251,0.561086559122548,0.632365371242573,0,0,0.123397163921801,5.63259991465583,4.00428253718626,8.25547779475453,15.5154857545549,15.2145091041377,21.2235900582127,18.0784354764808,21.8649064462616,22.698931748505,15.1008777253445,24.4405951096503,32.7484033948283,15.9139213288426,9.34541848404313,5.74071723270119,13.5084185981743,0.923765950833023,0,0,0,0,0.167506257441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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20728 | |||
|HGNC= | |||
|MCL_coexpression_id=881 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q6P3D7,uniprot:D6RE28 | |||
|association_with_transcript=0bp_to_ENSMUST00000004473,ENSMUST00000133724,ENSMUST00000144338,NM_011461,uc007grv.2,uc011xli.1_5end | |||
|cluster_id=chr10:88145766..88145770,- | |||
|description=CAGE_peak_1_at_Spic_5end | |||
|id=chr10:88145766..88145770,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,4.95e-07,6;CL:0000556,4.95e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.77e-19!70;UBERON:0005057!6.55e-15!51;UBERON:0001041!8.65e-12!92;UBERON:0002365!2.29e-11!25;UBERON:0002330!2.29e-11!25;UBERON:0000926!3.47e-11!193;UBERON:0004120!3.47e-11!193;UBERON:0006603!3.47e-11!193;UBERON:0000949!5.37e-11!72;UBERON:0002107!5.38e-11!22;UBERON:0007499!5.38e-11!22;UBERON:0006925!5.38e-11!22;UBERON:0009497!5.38e-11!22;UBERON:0000015!5.38e-11!22;UBERON:0002423!5.38e-11!22;UBERON:0006235!5.38e-11!22;UBERON:0008835!5.38e-11!22;UBERON:0003894!5.38e-11!22;UBERON:0004161!5.38e-11!22;UBERON:0008836!5.38e-11!22;UBERON:0003104!7.61e-11!131;UBERON:0009142!7.61e-11!131;UBERON:0000077!9.51e-11!97;UBERON:0005172!9.95e-11!49;UBERON:0005173!9.95e-11!49;UBERON:0002417!9.95e-11!49;UBERON:0000916!9.95e-11!49;UBERON:0002368!1.79e-10!60;UBERON:0002530!5.30e-10!65;UBERON:0009854!5.86e-10!23;UBERON:0009856!5.86e-10!23;UBERON:0002193!2.30e-09!48;UBERON:0002390!6.59e-09!45;UBERON:0003061!6.59e-09!45;UBERON:0000466!2.88e-08!79;UBERON:0009569!3.60e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.79e-13,22;UBERON:0007499,4.79e-13,22;UBERON:0006925,4.79e-13,22;UBERON:0009497,4.79e-13,22;UBERON:0000015,4.79e-13,22;UBERON:0002423,4.79e-13,22;UBERON:0006235,4.79e-13,22;UBERON:0008835,4.79e-13,22;UBERON:0003894,4.79e-13,22;UBERON:0004161,4.79e-13,22;UBERON:0008836,4.79e-13,22;UBERON:0002365,1.07e-12,25;UBERON:0002330,1.07e-12,25;UBERON:0002390,3.07e-12,45;UBERON:0003061,3.07e-12,45;UBERON:0009854,3.86e-12,23;UBERON:0009856,3.86e-12,23;UBERON:0002193,5.33e-12,48;UBERON:0002405,5.33e-12,48;UBERON:0002368,6.37e-12,60;UBERON:0000949,1.23e-11,72;UBERON:0001041,1.25e-11,80;UBERON:0002530,2.49e-11,65;UBERON:0005172,5.03e-11,49;UBERON:0005173,5.03e-11,49;UBERON:0002417,5.03e-11,49;UBERON:0000916,5.03e-11,49;UBERON:0003929,5.40e-10,55;UBERON:0005256,1.17e-08,45;UBERON:0000490,2.13e-08,66;UBERON:0004177,3.23e-08,29;UBERON:0005057,3.23e-08,29;UBERON:0002106,5.53e-07,6;UBERON:0004457,5.53e-07,6;UBERON:0000042,5.53e-07,6;UBERON:0004854,5.53e-07,6;UBERON:0009034,5.53e-07,6;UBERON:0002095,5.53e-07,6;UBERON:0004782,5.53e-07,6;UBERON:0003281,5.53e-07,6;UBERON:0009664,5.53e-07,6;UBERON:0002296,5.53e-07,6;UBERON:0005602,5.53e-07,6;UBERON:0001179,5.53e-07,6;UBERON:0006293,5.53e-07,6 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,0.645616617207881,0.140788722151667,0,0,0,0.171200729931206,0.262261207256992,55.9624399850313,50.6188168474565,76.252244715968,27.2874773034876,28.6569166235994,28.00971701867,0.765389611359628,0.0992909512008853,0,0.319984845586813,0.68822784320151,0,0.430761996159075,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0,2.09265815368454,3.906676722619,2.61761871986899,0.588231488031014,2.73218193983378,1.94204141212461,0,0,0,0,0,0,0,0,0,1.51004345451963,1.45072428402269,1.00828139742739,0,0.573066879877513,0,0,0,0,0,0,2.2497492932035,2.96659908770092,1.4209602298922,0.299600110518405,0,0,0,0,0.285650984403804,0,0,0.0958454710182364,0,0,0.255374676170375,0,0,0,0,0,0,0,0,0.142371680799103,0,0.227178579999552,0,0.579728977403356,7.74381489283248,2.03991400112325,0.539703191637817,1.94932925234301,1.34408066129201,10.5333315098814,0,0,0,0,0,0,0,0,0,0,7.4219521817389,113.155855153814,2.22663208597237,0.693941307064543,2.43572382649713,0.691846491768175,2.86373017049983,4.70354828542819,1.0053327306374,0,1.3013942122792,17.6922110389975,2.75003644910596,10.1587098491781,8.24287930329878,0,0,0,0.255457055208591,0.479260498023681,1.19980546198682,0.508280908292259,0,0,0,0,0,0,0,0,10.3257785606377,0.252722758433675,0.210441855886474,0,0,0.180062129805349,0.60281927134286,0,0,0.0937017245597288,0.258703370739016,0,0,0,0,0.278047249225598,0,0.61734640922383,0.199034266818493,0,0.51469581422943,0.284163499395593,0,0.234526059981096,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0.162137619091711,0.292399974850665,0.878200461164203,0.536825675041487,0,0,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0.444756087689741,0.760902504450237,0.949058123089023,0.329397909448022,2.01068167040216,1.59165177632921,1.36474860983384,0.898819408654221,0.648414149624083,0.199141273254367,0.189667900953082,0.571242563048644,0,0.203651327845314,0.387904974335251,0.561086559122548,0.632365371242573,0,0,0.123397163921801,5.63259991465583,4.00428253718626,8.25547779475453,15.5154857545549,15.2145091041377,21.2235900582127,18.0784354764808,21.8649064462616,22.698931748505,15.1008777253445,24.4405951096503,32.7484033948283,15.9139213288426,9.34541848404313,5.74071723270119,13.5084185981743,0.923765950833023,0,0,0,0,0.167506257441816,0.714130922658041,0.195133647857799,0.945810864637146,0.8858587585951,0.159454768657487,0.81931657357869,2.07221978239075,0.433947175744535,4.52373851817817,4.35124547054968,0.983528546038072,1.37968373152366,0,0,0,1.26235463602186,0,0,0,0,0,0,0,0,0,0,1.13552068166615,0.178065603667255,0.162886959353576,0.329940245945071,2.65490276679926,1.21390318077491,0.302323556964751,0.565815239267694,0.885905678642318,0.614870295887855,2.32585463851399,1.09060118843252,0,2.52829406348653,2.10837217149998,0,0.340439605753788,0,0.129358683782755,0,0.532020700926821,0.178368817602071,0.164549020602121,0.608929898229199,1.17335854031855,0,0,0.65954501176592,0.161464426695906,0.180938774784468,0.119372344003136,0.164140899745061,1.1659233465194,0,95.6876932467975,9.08102219038179,32.779431344439,58.5825901284589,57.4115756428306,93.1127164950547,3.56954702987096,4.19854356970974,3.45499934511059,1.90934123603023,0.158167996790568,0.813277868507395,1.18805874903981,0.627264888043406,1.09181281873089,0.674321731924103,3.71940550764012,0.523511883968059,1.29614973291793,1.86401793926078,0,0.747582730219894,0.992750942742586,1.16670713006429,1.16243841129958,2.19642963138012,1.05621514781179,1.3020438484395,0.209718688851422,0,0.288030006257865,9.79634473947353,1.21635129174099,1.33524244314275,5.45667456506739,3.93858730468459,8.34461690081313,8.77426781495773,8.4183030489509,9.08698049533329,7.77309427880998,9.88096614341037,11.402572046551,9.62118416403295,11.4539364137938,0,0,0,0,0.965947970160952,0.563047426353546,0.73260649706906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853668028770671,4.37592090722929,2.51535795153579,0.735374033800057,2.22246727801615,1.44224540067226,0.64183841918363,0,0.760437899670719,2.64076877940507,1.68554713445788,1.47257850531199,1.7230640686684,0,0.811190281613988,1.73618298417335,1.23625770240992,1.17759136107518,3.08582327146874,1.06485483695602,0.715308569841963,1.59881058295561,1.78807822789128,1.18460451048347,0.73171189149109,2.10455769150274,0.950628796921032,0.561142271657738,1.18635018124174,0.985044823755635,0.818462086339379,2.01417893541756,1.73615949883027,0.249810577937946,4.21076895201735,2.57845264857958,0.191288332068843,2.20591419119516,3.01428186306548 | |||
|short_description=p1@Spic | |||
}} |
Revision as of 00:10, 5 August 2015
Short description: | p1@Spic |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Spic_5end |
Coexpression cluster: | MCL_coexpression_mm9:881 |
Association with transcript: | 0bp_to_ENSMUST00000004473, ENSMUST00000133724, ENSMUST00000144338, NM_011461, uc007grv.2, uc011xli.1_5end |
EntrezGene: | 20728 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 4.95e-07 | 6 |
megakaryocyte | 4.95e-07 | 6 |