FFCP PHASE1:Mm9::chr17:47863783..47863797,+: Difference between revisions
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{{FFCP|EntrezGene=109820|HGNC=|MCL_coexpression_id=54|UniProt=Q9D7R7,E9Q116,D3YZ92|association_with_transcript=0bp_to_ENSMUST00000024782,ENSMUST00000097312,ENSMUST00000144955,NM_025973,uc008cwb.1_5end|description=CAGE_peak_1_at_Pgc_5end|id=chr17:47863783..47863797,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.12e-13!130;UBERON:0000925!1.12e-13!130;UBERON:0006595!1.12e-13!130;UBERON:0001007!1.94e-13!128;UBERON:0001555!1.94e-13!128;UBERON:0007026!1.94e-13!128;UBERON:0004921!6.43e-13!126;UBERON:0004185!6.43e-13!126;UBERON:0005409!2.45e-10!59;UBERON:0002048!3.54e-08!14;UBERON:0000117!3.54e-08!14;UBERON:0000171!3.54e-08!14;UBERON:0000170!3.54e-08!14;UBERON:0005597!3.54e-08!14;UBERON:0000118!3.54e-08!14;UBERON:0000077!2.50e-07!97;UBERON:0001041!2.68e-07!92|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.11e-13,118;UBERON:0000925,3.11e-13,118;UBERON:0006595,3.11e-13,118;UBERON:0001007,8.47e-13,116;UBERON:0001555,8.47e-13,116;UBERON:0007026,8.47e-13,116;UBERON:0004921,1.05e-12,114;UBERON:0005409,9.50e-11,47;UBERON:0002048,1.02e-09,14;UBERON:0000117,1.02e-09,14;UBERON:0000171,1.02e-09,14;UBERON:0000170,1.02e-09,14;UBERON:0005597,1.02e-09,14;UBERON:0000118,1.02e-09,14;UBERON:0001041,2.08e-07,80;UBERON:0005153,2.40e-07,17;UBERON:0005178,2.40e-07,17;UBERON:0005181,2.40e-07,17;UBERON:0002224,2.40e-07,17;UBERON:0000915,2.40e-07,17;UBERON:0008947,2.40e-07,17;UBERON:0003258,2.40e-07,17|phase1_expression=0,0,0,0,0,1.00727563147134,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,1.27993938234725,0.68822784320151,0,0.430761996159075,0,0,0,0,0,0,0,23.108129580102,23.4390849955474,22.4586291888606,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,0,0,0,0,0,3666.16114311925,0,0,0,0,0,0,0,0,0,0,7516.610618026,0.517875767294343,0,0,0,0,0,0.117588707135705,0.125666591329675,107.529810964453,0,0,0,0,0,56236.2582771196,0,0.209446706813455,53.3905245385956,0,0,0,0,0,0,0,0.255715457330331,0,0,0.509196819251581,0,0,0,0,0,0,0,0,0,0,0,0,0,0.351902248327898,1.09597866213787,0.556094498451196,0.348252166522167,0.411564272815887,0.59710280045548,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0.154267112887378,0.232533944750408,0.268273401399619,0.116765342367169,0.822799249567402,0,0.0810688095458557,0.292399974850665,0,0,0,0,5.61711931072457,0.528901133327089,0,0.232236671860439,1.80414445850931,0.403367049246685,0.889512175379481,1.71203063501303,28.9462727542152,8.72904460037258,8.54539709920916,85.9491959217772,11.8928093142663,30.5598598942435,4.53889904736858,17.5244320463843,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0.156998727841375,0,18.0836102523161,0,0.196558995113203,0.449724224769707,0.202860121388503,0,3.8193877767213,2.5892652370573,0.324270453550071,0,0,1.86070473834252,0.936113019343682,0.252578877947112,0.179397413521912,0,4.0645701836653,0.757965647081939,6.68156403412306,10.5241953180617,22.7649540839847,57.287140045101,44.0380735639125,26.9284434043762,9.93101407869003,11.0732344824387,14.8292934851463,5.57135270033509,4.66249451037918,5.06271705035291,0,0,0,0,0.321101179975584,0.117211686592203,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0.534196811001766,0.977321756121456,0.329940245945071,0,0.485561272309963,0.604647113929502,0.188605079755898,0,2.76691633149535,3.6179961043551,0.363533729477506,0.712994756769443,0.316036757935816,0,0,0,0,0,0,0,0.535106452806212,0.493647061806363,1.522324745573,0,118.414127612875,0,0,0,0,0.477489376012546,0,27.6906794798358,0.927126510052548,0,0.619160603889667,0.555583582109135,0.188368457004691,1.0935538217682,2.51655990527175,0,0,0,419687.523738714,0.949007980743406,60.3858817366741,152.611546581205,466.894165000309,797.896807928533,4210.33002978772,4177.47095926993,188280.263801287,0,0,0,0.897099276263873,0.496375471371293,0.388902376688095,0.129159823477731,0.337912250981556,0.117357238645754,0.2604087696879,0,0.241584120826006,0,1.58005560314089,0,0.308132871494482,0.649604114888975,1.79026695667481,2.38417625737518,2.76449533895928,1.18151621739662,2.42319479875554,2.28620419965,2.82313318383153,4.0932309910696,2.79014340756955,3.27255326108393,0,0,0,0,0.19318959403219,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43106717068294,0.838452650511929,1.65459157605013,7.77863547305653,10.9198580336614,14.7622836412235,8.08631077644152,9.37873409593887,8.86543804514558,11.8924714486751,9.41169740351578,9.99377159827671,11.4310485907938,9.03897742369873,10.2241886845764,9.06588981767275,11.6287146906174,8.9146005620208,9.05126611412621,10.9680647375768,12.2090989971156,8.09340671571843,9.13837765230106,10.7927503994936,8.41823076601097,11.0001332215148,17.9565526930476,11.2703267217965,10.3429706494342,10.2307760792422,11.6202630889474,6.94463799532109,0,11.2287172053796,32.0157870531964,0.191288332068843,0,0|short_description=p1@Pgc}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:109820 | |||
|HGNC= | |||
|MCL_coexpression_id=54 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9D7R7,uniprot:E9Q116,uniprot:D3YZ92 | |||
|association_with_transcript=0bp_to_ENSMUST00000024782,ENSMUST00000097312,ENSMUST00000144955,NM_025973,uc008cwb.1_5end | |||
|cluster_id=chr17:47863783..47863797,+ | |||
|description=CAGE_peak_1_at_Pgc_5end | |||
|id=chr17:47863783..47863797,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.12e-13!130;UBERON:0000925!1.12e-13!130;UBERON:0006595!1.12e-13!130;UBERON:0001007!1.94e-13!128;UBERON:0001555!1.94e-13!128;UBERON:0007026!1.94e-13!128;UBERON:0004921!6.43e-13!126;UBERON:0004185!6.43e-13!126;UBERON:0005409!2.45e-10!59;UBERON:0002048!3.54e-08!14;UBERON:0000117!3.54e-08!14;UBERON:0000171!3.54e-08!14;UBERON:0000170!3.54e-08!14;UBERON:0005597!3.54e-08!14;UBERON:0000118!3.54e-08!14;UBERON:0000077!2.50e-07!97;UBERON:0001041!2.68e-07!92 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.11e-13,118;UBERON:0000925,3.11e-13,118;UBERON:0006595,3.11e-13,118;UBERON:0001007,8.47e-13,116;UBERON:0001555,8.47e-13,116;UBERON:0007026,8.47e-13,116;UBERON:0004921,1.05e-12,114;UBERON:0005409,9.50e-11,47;UBERON:0002048,1.02e-09,14;UBERON:0000117,1.02e-09,14;UBERON:0000171,1.02e-09,14;UBERON:0000170,1.02e-09,14;UBERON:0005597,1.02e-09,14;UBERON:0000118,1.02e-09,14;UBERON:0001041,2.08e-07,80;UBERON:0005153,2.40e-07,17;UBERON:0005178,2.40e-07,17;UBERON:0005181,2.40e-07,17;UBERON:0002224,2.40e-07,17;UBERON:0000915,2.40e-07,17;UBERON:0008947,2.40e-07,17;UBERON:0003258,2.40e-07,17 | |||
|phase1_expression=0,0,0,0,0,1.00727563147134,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,1.27993938234725,0.68822784320151,0,0.430761996159075,0,0,0,0,0,0,0,23.108129580102,23.4390849955474,22.4586291888606,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,0,0,0,0,0,3666.16114311925,0,0,0,0,0,0,0,0,0,0,7516.610618026,0.517875767294343,0,0,0,0,0,0.117588707135705,0.125666591329675,107.529810964453,0,0,0,0,0,56236.2582771196,0,0.209446706813455,53.3905245385956,0,0,0,0,0,0,0,0.255715457330331,0,0,0.509196819251581,0,0,0,0,0,0,0,0,0,0,0,0,0,0.351902248327898,1.09597866213787,0.556094498451196,0.348252166522167,0.411564272815887,0.59710280045548,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0.154267112887378,0.232533944750408,0.268273401399619,0.116765342367169,0.822799249567402,0,0.0810688095458557,0.292399974850665,0,0,0,0,5.61711931072457,0.528901133327089,0,0.232236671860439,1.80414445850931,0.403367049246685,0.889512175379481,1.71203063501303,28.9462727542152,8.72904460037258,8.54539709920916,85.9491959217772,11.8928093142663,30.5598598942435,4.53889904736858,17.5244320463843,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0.156998727841375,0,18.0836102523161,0,0.196558995113203,0.449724224769707,0.202860121388503,0,3.8193877767213,2.5892652370573,0.324270453550071,0,0,1.86070473834252,0.936113019343682,0.252578877947112,0.179397413521912,0,4.0645701836653,0.757965647081939,6.68156403412306,10.5241953180617,22.7649540839847,57.287140045101,44.0380735639125,26.9284434043762,9.93101407869003,11.0732344824387,14.8292934851463,5.57135270033509,4.66249451037918,5.06271705035291,0,0,0,0,0.321101179975584,0.117211686592203,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0.534196811001766,0.977321756121456,0.329940245945071,0,0.485561272309963,0.604647113929502,0.188605079755898,0,2.76691633149535,3.6179961043551,0.363533729477506,0.712994756769443,0.316036757935816,0,0,0,0,0,0,0,0.535106452806212,0.493647061806363,1.522324745573,0,118.414127612875,0,0,0,0,0.477489376012546,0,27.6906794798358,0.927126510052548,0,0.619160603889667,0.555583582109135,0.188368457004691,1.0935538217682,2.51655990527175,0,0,0,419687.523738714,0.949007980743406,60.3858817366741,152.611546581205,466.894165000309,797.896807928533,4210.33002978772,4177.47095926993,188280.263801287,0,0,0,0.897099276263873,0.496375471371293,0.388902376688095,0.129159823477731,0.337912250981556,0.117357238645754,0.2604087696879,0,0.241584120826006,0,1.58005560314089,0,0.308132871494482,0.649604114888975,1.79026695667481,2.38417625737518,2.76449533895928,1.18151621739662,2.42319479875554,2.28620419965,2.82313318383153,4.0932309910696,2.79014340756955,3.27255326108393,0,0,0,0,0.19318959403219,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43106717068294,0.838452650511929,1.65459157605013,7.77863547305653,10.9198580336614,14.7622836412235,8.08631077644152,9.37873409593887,8.86543804514558,11.8924714486751,9.41169740351578,9.99377159827671,11.4310485907938,9.03897742369873,10.2241886845764,9.06588981767275,11.6287146906174,8.9146005620208,9.05126611412621,10.9680647375768,12.2090989971156,8.09340671571843,9.13837765230106,10.7927503994936,8.41823076601097,11.0001332215148,17.9565526930476,11.2703267217965,10.3429706494342,10.2307760792422,11.6202630889474,6.94463799532109,0,11.2287172053796,32.0157870531964,0.191288332068843,0,0 | |||
|short_description=p1@Pgc | |||
}} |
Revision as of 00:43, 5 August 2015
Short description: | p1@Pgc |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pgc_5end |
Coexpression cluster: | MCL_coexpression_mm9:54 |
Association with transcript: | 0bp_to_ENSMUST00000024782, ENSMUST00000097312, ENSMUST00000144955, NM_025973, uc008cwb.1_5end |
EntrezGene: | 109820 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.11e-13 | 118 |
endoderm | 3.11e-13 | 118 |
presumptive endoderm | 3.11e-13 | 118 |
digestive system | 8.47e-13 | 116 |
digestive tract | 8.47e-13 | 116 |
primitive gut | 8.47e-13 | 116 |
subdivision of digestive tract | 1.05e-12 | 114 |
gastrointestinal system | 9.50e-11 | 47 |
lung | 1.02e-09 | 14 |
respiratory tube | 1.02e-09 | 14 |
respiration organ | 1.02e-09 | 14 |
pair of lungs | 1.02e-09 | 14 |
lung primordium | 1.02e-09 | 14 |
lung bud | 1.02e-09 | 14 |
foregut | 2.08e-07 | 80 |
epithelial bud | 2.40e-07 | 17 |
thoracic cavity element | 2.40e-07 | 17 |
thoracic segment organ | 2.40e-07 | 17 |
thoracic cavity | 2.40e-07 | 17 |
thoracic segment of trunk | 2.40e-07 | 17 |
respiratory primordium | 2.40e-07 | 17 |
endoderm of foregut | 2.40e-07 | 17 |