FFCP PHASE1:Mm9::chr12:40763955..40763969,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=11861|HGNC=|UniProt=G3UVX1,P61213|association_with_transcript=0bp_to_ENSMUST00000136441,NM_007487,uc007nkr.1,uc007nks.1_5end|description=CAGE_peak_1_at_Arl4a_5end|id=chr12:40763955..40763969,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.55e-10!43;UBERON:0005409!3.92e-10!59;UBERON:0004923!7.87e-09!24;UBERON:0004119!7.62e-08!130;UBERON:0000925!7.62e-08!130;UBERON:0006595!7.62e-08!130;UBERON:0001007!2.16e-07!128;UBERON:0001555!2.16e-07!128;UBERON:0007026!2.16e-07!128;UBERON:0002365!2.38e-07!25;UBERON:0002330!2.38e-07!25;UBERON:0004921!3.40e-07!126;UBERON:0004185!3.40e-07!126;UBERON:0009854!5.73e-07!23;UBERON:0009856!5.73e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.57e-10,31;UBERON:0005409,9.07e-10,47;UBERON:0004923,7.86e-09,24;UBERON:0002365,2.38e-07,25;UBERON:0002330,2.38e-07,25;UBERON:0009854,5.73e-07,23;UBERON:0009856,5.73e-07,23;UBERON:0004119,5.84e-07,118;UBERON:0000925,5.84e-07,118;UBERON:0006595,5.84e-07,118|phase1_expression=54.7709057098395,131.912704087678,110.564815171657,132.781788763698,152.773197633636,36.2619227329682,24.5293272625302,19.8849918100027,25.0603925429967,26.6833560007073,3.08192342805909,4.54701306273417,14.3808613142213,13.2004807652686,36.9751835615386,71.0688188538289,100.037348572325,6.78243655520211,4.9361196098066,7.63901373236454,11.0556277196391,2.48227378002213,0.522399578277871,16.9591968161011,19.9586074528438,91.8771142584032,77.5371593086335,65.0723122711385,44.4654801527915,43.601212448468,41.9070665138526,8.25539875497521,9.22597181376855,0,17.6199488048278,17.4546377626417,20.0085969137122,4.18531630736908,2.3440060335714,4.71171369576418,7.05877785637217,3.41522742479223,3.39857247121808,0.503587271902309,0.608261587317087,0.917733760808408,4.69434806608824,2.8343270329458,1.09843091367236,2.13872888981712,19.3181261843,1.43752564364972,9.2280433331755,23.9369506863744,22.8543783416875,2.31533492432352,2.29226751951005,9.28209766099396,5.66486090406874,5.28990979272033,5.70448263155561,6.09920157724438,15.1180115338894,0.449949858640699,0,1.4209602298922,1.19840044207362,1.92109152660777,3.94020526772215,3.51015439662396,3.57552434297349,9.14083150092171,11.7060326704355,5.02212276781312,3.92966431174769,1.83843757322004,3.30347642998166,4.34136949489638,6.60508093001847,8.44072241473241,12.4423195299277,17.7110545989298,5.30447698102624,7.31591393041184,7.18151764551008,13.8475435172624,15.9456282494995,16.9623495701024,5.07365495332333,9.3708734532414,72.1762576867178,42.1607699720879,64.5972767022363,22.1278308571505,12.9955283489534,17.4730485967961,19.1004411379183,3.40860645156115,2.59786004602869,2.47337702157238,13.239281459008,3.84979432242953,0,0,22.9480503471887,22.0423082963336,26.2872711407687,41.3345644582997,9.58070169494535,10.0940654564081,9.1947223186052,7.30717147949139,11.5307748628029,11.7563659631046,14.2282335634203,22.9969862133306,38.8096099342967,84.1568257273886,22.9998743506967,18.2796540440572,26.2801406967868,30.547140947519,93.1958806090611,12.0040126774734,16.9651832518899,34.997616563577,16.4146720573111,23.3962065087429,10.5468288470644,4.04434726393021,8.23501085073528,8.79580464790051,8.34356736922927,8.69432554923124,7.2725815595846,8.76102820565891,23.3212143217224,27.2451265636104,5.05445516867349,9.89076722666428,7.026503919986,13.5642241615749,14.945156773844,19.4409215008072,14.9680298132921,15.6298738747517,10.4945931506896,10.3481348295606,4.95806383745537,11.535470890237,10.205165201509,14.6861140726475,18.6291656981151,30.9944428204728,38.4812595082854,8.55847347319521,9.83098462238529,14.9261786126535,8.24074148247219,10.3562886267751,8.67746421930056,7.56260658136262,5.68187365404505,6.49321964766433,6.78775296704464,7.20855228726264,3.75582761959467,10.1585847859437,6.41783414662574,9.68588038066662,8.99863785958999,11.8421989814519,9.66020507280623,11.0049263383505,4.83666881697493,11.6282211988591,59.8057997200674,32.2629691329524,5.75878276445132,7.19933682767359,13.0156135935314,23.7986559055544,24.4615848229357,25.870685151308,44.1312027236396,49.2449874624793,36.4436052760391,36.6079908555717,38.2129610753476,42.2445122067484,52.7376841694254,50.5818834066093,9.86273084956025,10.3966146474853,11.270773567308,12.0154283428735,9.89157684554891,14.6583863570766,45.7832528779623,8.41377843483732,8.16393384775149,7.89741849099523,10.6722945751374,17.5187361001899,33.0219111790181,41.5994907911979,34.4862206360455,47.7530776309785,58.5639459097266,47.4698626793838,57.7201407319126,23.0631587077988,15.814502718009,24.5613025461212,22.7787501373629,17.1753637004036,17.4015491116255,54.5161179140605,14.7802552133284,9.66406200029472,4.23708938749267,5.60158783058121,5.16318546234705,5.19269398069629,8.56957107189649,12.2934198150413,7.88175720530955,10.85176979279,9.08892181347676,11.9620219742489,11.2245238212832,11.8612228036839,0,0.54390568381871,114.581075613435,57.3948432313844,3.37156238974363,7.2671245687166,1.63934945376675,15.6531974866711,7.88770548540642,7.80877488593277,8.18608911384636,2.62865677747807,2.67358408898873,3.96307143104365,5.66734982344852,7.01414058987149,13.0444966722353,23.1351347823701,9.22610553853746,12.2865266530406,29.6454266023508,10.2281476242972,30.5313818181915,7.28341908464944,5.44182402536552,15.2770114602277,14.1744908582771,24.2873766875703,19.1236936944484,15.9954840970102,19.6073558111597,32.2357493094532,18.9753495434998,31.9720184069379,9.53230896110606,9.18311579559682,8.40831444587904,15.0035924522115,14.896579625951,15.5180871313801,17.1130981426206,10.9607381681256,100.439491051268,15.4637411730589,8.60060752414351,49.1361033765611,52.6374031028652,53.799129035915,46.3164694732169,46.2877337281073,53.0495122666328,4.63563255026274,31.0985003052092,11.3512777379772,22.5937323391048,80.8100680550124,43.7421528707281,55.3643179159785,29.406268388937,24.7714070612875,21.5591959134901,14.3200592702267,4.58687190692646,8.13277868507395,10.1525020372493,7.3180903605064,8.29777742235475,14.5653494095606,15.6215031320885,12.0407733312654,66.7517112452733,13.6694648879124,5.07323644815771,2.8408143748356,4.63283773279873,5.05573089694524,3.35815541042101,6.58928889414035,9.85800804624333,7.81226309063701,8.07416952077974,8.93861247056222,9.79302021276743,7.90027801570446,13.582589424441,10.7846505023069,7.66532855568991,6.44496104402933,10.530111803407,6.25016337503838,5.46451250545936,8.38021534569625,6.17275133905499,7.36031151498936,8.47883562435846,6.25376970662141,8.06450625052826,24.9403421976732,0.665957860122194,1.07656627931371,0.335769232728157,14.2960299583821,38.6625899429435,6.77661009788881,11.1471557121114,7.02200945649509,11.8597886949584,6.90487854760765,9.73922372846974,11.3423100346834,8.90607275701835,9.82012066606611,6.07520250208625,7.65546045481175,5.89085131679466,4.14208249401456,11.2090335390911,12.369771075432,14.8538237006097,22.1227112532148,13.2056292455629,20.7743164548516,20.6689456855502,20.6035057238894,19.8969909946925,23.5008406940332,23.3200955899021,22.0692819421709,28.7479427932539,27.5308155340938,31.3597660497648,24.2909782554368,25.4945517078682,30.093838392338,21.8405527425753,27.8205959054011,18.8578088811978,25.2015644746259,27.8970342238365,22.3833481613786,30.1150017329058,27.4151329569032,31.6465393069897,33.6729230640439,26.7534104276348,25.2514022245982,24.3201787154557,26.6947147237777,33.1477144967448,31.2972419195651,25.6565792604918,14.4890135204009,25.9664085374403,34.3793686477277,41.3182797268702,31.7651643532102,26.6648010963485|short_description=p1@Arl4a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:11861 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:G3UVX1,uniprot:P61213 | |||
|association_with_transcript=0bp_to_ENSMUST00000136441,NM_007487,uc007nkr.1,uc007nks.1_5end | |||
|cluster_id=chr12:40763955..40763969,- | |||
|description=CAGE_peak_1_at_Arl4a_5end | |||
|id=chr12:40763955..40763969,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.55e-10!43;UBERON:0005409!3.92e-10!59;UBERON:0004923!7.87e-09!24;UBERON:0004119!7.62e-08!130;UBERON:0000925!7.62e-08!130;UBERON:0006595!7.62e-08!130;UBERON:0001007!2.16e-07!128;UBERON:0001555!2.16e-07!128;UBERON:0007026!2.16e-07!128;UBERON:0002365!2.38e-07!25;UBERON:0002330!2.38e-07!25;UBERON:0004921!3.40e-07!126;UBERON:0004185!3.40e-07!126;UBERON:0009854!5.73e-07!23;UBERON:0009856!5.73e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.57e-10,31;UBERON:0005409,9.07e-10,47;UBERON:0004923,7.86e-09,24;UBERON:0002365,2.38e-07,25;UBERON:0002330,2.38e-07,25;UBERON:0009854,5.73e-07,23;UBERON:0009856,5.73e-07,23;UBERON:0004119,5.84e-07,118;UBERON:0000925,5.84e-07,118;UBERON:0006595,5.84e-07,118 | |||
|phase1_expression=54.7709057098395,131.912704087678,110.564815171657,132.781788763698,152.773197633636,36.2619227329682,24.5293272625302,19.8849918100027,25.0603925429967,26.6833560007073,3.08192342805909,4.54701306273417,14.3808613142213,13.2004807652686,36.9751835615386,71.0688188538289,100.037348572325,6.78243655520211,4.9361196098066,7.63901373236454,11.0556277196391,2.48227378002213,0.522399578277871,16.9591968161011,19.9586074528438,91.8771142584032,77.5371593086335,65.0723122711385,44.4654801527915,43.601212448468,41.9070665138526,8.25539875497521,9.22597181376855,0,17.6199488048278,17.4546377626417,20.0085969137122,4.18531630736908,2.3440060335714,4.71171369576418,7.05877785637217,3.41522742479223,3.39857247121808,0.503587271902309,0.608261587317087,0.917733760808408,4.69434806608824,2.8343270329458,1.09843091367236,2.13872888981712,19.3181261843,1.43752564364972,9.2280433331755,23.9369506863744,22.8543783416875,2.31533492432352,2.29226751951005,9.28209766099396,5.66486090406874,5.28990979272033,5.70448263155561,6.09920157724438,15.1180115338894,0.449949858640699,0,1.4209602298922,1.19840044207362,1.92109152660777,3.94020526772215,3.51015439662396,3.57552434297349,9.14083150092171,11.7060326704355,5.02212276781312,3.92966431174769,1.83843757322004,3.30347642998166,4.34136949489638,6.60508093001847,8.44072241473241,12.4423195299277,17.7110545989298,5.30447698102624,7.31591393041184,7.18151764551008,13.8475435172624,15.9456282494995,16.9623495701024,5.07365495332333,9.3708734532414,72.1762576867178,42.1607699720879,64.5972767022363,22.1278308571505,12.9955283489534,17.4730485967961,19.1004411379183,3.40860645156115,2.59786004602869,2.47337702157238,13.239281459008,3.84979432242953,0,0,22.9480503471887,22.0423082963336,26.2872711407687,41.3345644582997,9.58070169494535,10.0940654564081,9.1947223186052,7.30717147949139,11.5307748628029,11.7563659631046,14.2282335634203,22.9969862133306,38.8096099342967,84.1568257273886,22.9998743506967,18.2796540440572,26.2801406967868,30.547140947519,93.1958806090611,12.0040126774734,16.9651832518899,34.997616563577,16.4146720573111,23.3962065087429,10.5468288470644,4.04434726393021,8.23501085073528,8.79580464790051,8.34356736922927,8.69432554923124,7.2725815595846,8.76102820565891,23.3212143217224,27.2451265636104,5.05445516867349,9.89076722666428,7.026503919986,13.5642241615749,14.945156773844,19.4409215008072,14.9680298132921,15.6298738747517,10.4945931506896,10.3481348295606,4.95806383745537,11.535470890237,10.205165201509,14.6861140726475,18.6291656981151,30.9944428204728,38.4812595082854,8.55847347319521,9.83098462238529,14.9261786126535,8.24074148247219,10.3562886267751,8.67746421930056,7.56260658136262,5.68187365404505,6.49321964766433,6.78775296704464,7.20855228726264,3.75582761959467,10.1585847859437,6.41783414662574,9.68588038066662,8.99863785958999,11.8421989814519,9.66020507280623,11.0049263383505,4.83666881697493,11.6282211988591,59.8057997200674,32.2629691329524,5.75878276445132,7.19933682767359,13.0156135935314,23.7986559055544,24.4615848229357,25.870685151308,44.1312027236396,49.2449874624793,36.4436052760391,36.6079908555717,38.2129610753476,42.2445122067484,52.7376841694254,50.5818834066093,9.86273084956025,10.3966146474853,11.270773567308,12.0154283428735,9.89157684554891,14.6583863570766,45.7832528779623,8.41377843483732,8.16393384775149,7.89741849099523,10.6722945751374,17.5187361001899,33.0219111790181,41.5994907911979,34.4862206360455,47.7530776309785,58.5639459097266,47.4698626793838,57.7201407319126,23.0631587077988,15.814502718009,24.5613025461212,22.7787501373629,17.1753637004036,17.4015491116255,54.5161179140605,14.7802552133284,9.66406200029472,4.23708938749267,5.60158783058121,5.16318546234705,5.19269398069629,8.56957107189649,12.2934198150413,7.88175720530955,10.85176979279,9.08892181347676,11.9620219742489,11.2245238212832,11.8612228036839,0,0.54390568381871,114.581075613435,57.3948432313844,3.37156238974363,7.2671245687166,1.63934945376675,15.6531974866711,7.88770548540642,7.80877488593277,8.18608911384636,2.62865677747807,2.67358408898873,3.96307143104365,5.66734982344852,7.01414058987149,13.0444966722353,23.1351347823701,9.22610553853746,12.2865266530406,29.6454266023508,10.2281476242972,30.5313818181915,7.28341908464944,5.44182402536552,15.2770114602277,14.1744908582771,24.2873766875703,19.1236936944484,15.9954840970102,19.6073558111597,32.2357493094532,18.9753495434998,31.9720184069379,9.53230896110606,9.18311579559682,8.40831444587904,15.0035924522115,14.896579625951,15.5180871313801,17.1130981426206,10.9607381681256,100.439491051268,15.4637411730589,8.60060752414351,49.1361033765611,52.6374031028652,53.799129035915,46.3164694732169,46.2877337281073,53.0495122666328,4.63563255026274,31.0985003052092,11.3512777379772,22.5937323391048,80.8100680550124,43.7421528707281,55.3643179159785,29.406268388937,24.7714070612875,21.5591959134901,14.3200592702267,4.58687190692646,8.13277868507395,10.1525020372493,7.3180903605064,8.29777742235475,14.5653494095606,15.6215031320885,12.0407733312654,66.7517112452733,13.6694648879124,5.07323644815771,2.8408143748356,4.63283773279873,5.05573089694524,3.35815541042101,6.58928889414035,9.85800804624333,7.81226309063701,8.07416952077974,8.93861247056222,9.79302021276743,7.90027801570446,13.582589424441,10.7846505023069,7.66532855568991,6.44496104402933,10.530111803407,6.25016337503838,5.46451250545936,8.38021534569625,6.17275133905499,7.36031151498936,8.47883562435846,6.25376970662141,8.06450625052826,24.9403421976732,0.665957860122194,1.07656627931371,0.335769232728157,14.2960299583821,38.6625899429435,6.77661009788881,11.1471557121114,7.02200945649509,11.8597886949584,6.90487854760765,9.73922372846974,11.3423100346834,8.90607275701835,9.82012066606611,6.07520250208625,7.65546045481175,5.89085131679466,4.14208249401456,11.2090335390911,12.369771075432,14.8538237006097,22.1227112532148,13.2056292455629,20.7743164548516,20.6689456855502,20.6035057238894,19.8969909946925,23.5008406940332,23.3200955899021,22.0692819421709,28.7479427932539,27.5308155340938,31.3597660497648,24.2909782554368,25.4945517078682,30.093838392338,21.8405527425753,27.8205959054011,18.8578088811978,25.2015644746259,27.8970342238365,22.3833481613786,30.1150017329058,27.4151329569032,31.6465393069897,33.6729230640439,26.7534104276348,25.2514022245982,24.3201787154557,26.6947147237777,33.1477144967448,31.2972419195651,25.6565792604918,14.4890135204009,25.9664085374403,34.3793686477277,41.3182797268702,31.7651643532102,26.6648010963485 | |||
|short_description=p1@Arl4a | |||
}} |
Revision as of 01:01, 5 August 2015
Short description: | p1@Arl4a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Arl4a_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000136441, NM_007487, uc007nkr.1, uc007nks.1_5end |
EntrezGene: | 11861 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.57e-10 | 31 |
gastrointestinal system | 9.07e-10 | 47 |
organ component layer | 7.86e-09 | 24 |
exocrine gland | 2.38e-07 | 25 |
exocrine system | 2.38e-07 | 25 |
digestive tract diverticulum | 5.73e-07 | 23 |
sac | 5.73e-07 | 23 |
endoderm-derived structure | 5.84e-07 | 118 |
endoderm | 5.84e-07 | 118 |
presumptive endoderm | 5.84e-07 | 118 |