FFCP PHASE1:Mm9::chr9:3532360..3532448,+: Difference between revisions
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{{FFCP|EntrezGene=234889|HGNC=|MCL_coexpression_id=1|UniProt=F8VQK3,Q3TNN8,Q3UH83|association_with_transcript=6bp_to_ENSMUST00000115733,NM_001033322,uc009obc.1,uc009obd.1_5end|description=CAGE_peak_1_at_Gucy1a2_5end|id=chr9:3532360..3532448,+|ontology_enrichment_celltype=CL:0000117!1.22e-07!23;CL:0000337!1.22e-07!23;CL:0000540!2.21e-07!33;CL:0000047!2.21e-07!33;CL:0000031!2.21e-07!33;CL:0000404!2.21e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.15e-07,23;CL:0000337,1.15e-07,23;CL:0000540,2.10e-07,33;CL:0000047,2.10e-07,33;CL:0000031,2.10e-07,33;CL:0000404,2.10e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.16e-14!73;UBERON:0005743!1.16e-14!73;UBERON:0002346!1.57e-14!71;UBERON:0003075!1.57e-14!71;UBERON:0007284!1.57e-14!71;UBERON:0001049!6.11e-14!52;UBERON:0005068!6.11e-14!52;UBERON:0006241!6.11e-14!52;UBERON:0007135!6.11e-14!52;UBERON:0000073!1.31e-13!75;UBERON:0001016!1.31e-13!75;UBERON:0000955!2.73e-13!50;UBERON:0006238!2.73e-13!50;UBERON:0004121!5.57e-13!102;UBERON:0000924!5.57e-13!102;UBERON:0006601!5.57e-13!102;UBERON:0002616!1.04e-12!49;UBERON:0000033!1.53e-12!63;UBERON:0000468!3.20e-12!333;UBERON:0002020!3.94e-12!34;UBERON:0003056!1.19e-10!49;UBERON:0000025!1.51e-10!114;UBERON:0003080!4.34e-10!40;UBERON:0002791!8.98e-10!29;UBERON:0003528!8.98e-10!29;UBERON:0001893!8.98e-10!29;UBERON:0002780!1.41e-09!39;UBERON:0001890!1.41e-09!39;UBERON:0006240!1.41e-09!39;UBERON:0000922!1.43e-09!328;UBERON:0004111!4.26e-09!122;UBERON:0002021!3.30e-08!10;UBERON:0000411!3.30e-08!10;UBERON:0001950!3.30e-08!10;UBERON:0000479!1.12e-07!349;UBERON:0000475!2.89e-07!200|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.37e-15,54;UBERON:0002346,7.84e-15,64;UBERON:0003075,7.84e-15,64;UBERON:0007284,7.84e-15,64;UBERON:0001017,1.24e-14,73;UBERON:0001049,5.07e-14,52;UBERON:0005068,5.07e-14,52;UBERON:0006241,5.07e-14,52;UBERON:0007135,5.07e-14,52;UBERON:0001016,1.94e-13,75;UBERON:0010314,5.19e-13,92;UBERON:0010371,6.15e-13,73;UBERON:0004121,1.06e-12,95;UBERON:0000924,1.06e-12,95;UBERON:0006601,1.06e-12,95;UBERON:0002020,3.29e-12,34;UBERON:0000955,1.12e-11,47;UBERON:0006238,1.12e-11,47;UBERON:0002616,4.07e-11,46;UBERON:0003056,1.02e-10,49;UBERON:0000025,1.27e-10,114;UBERON:0003080,3.75e-10,40;UBERON:0003528,7.71e-10,29;UBERON:0002791,7.71e-10,29;UBERON:0001893,7.71e-10,29;UBERON:0002780,1.22e-09,39;UBERON:0001890,1.22e-09,39;UBERON:0006240,1.22e-09,39;UBERON:0004111,3.50e-09,122;UBERON:0002021,3.11e-08,10;UBERON:0000411,3.11e-08,10;UBERON:0001950,3.11e-08,10;UBERON:0000922,8.53e-08,320;UBERON:0000479,3.48e-07,349|phase1_expression=3.52327463630547,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,1.66554880907831,0.607425802169478,0,0,0.137114433605739,0,17.9441342218757,0.0992909512008853,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,3.9028013572429,5.17022349219524,3.85448179539531,2.34717403304412,2.8343270329458,0,1.55543919259427,0.55994568650145,0,0,0,0,7.20326420900652,8.30946975822394,14.9544906760458,13.7575193384526,7.93486468908049,15.8457850876545,0.338844532069132,0,0,0,0,2.99600110518405,4.61061966385865,9.64313394468842,7.1553147315796,8.41299845405528,22.2807767834967,18.9946945218388,8.94182834269164,10.9263836960789,6.43453150627015,88.092704799511,65.2482297615309,63.4394982348286,12.924856197559,15.4614117688072,20.8365348222704,32.6644108831616,25.3243174514256,32.2404302809069,33.2930301585245,30.3251680102089,16.0303523409758,0.757261933331841,2.41828992341714,4.63783181922684,12.0459342777394,0,1.61910957491345,1.94932925234301,1.34408066129201,6.60088774619234,0,0,0.35333957451034,5.35204995151386,0,0,0,0.216491041011214,0.506719730950197,0,4.90990682791958,20.9739685754209,10.3909497345377,8.15381035800839,8.8294988710521,6.22661842591358,6.33035090321015,10.4653949350777,7.53999547978053,6.42706916109372,16.7735254027098,0.884610551949874,3.558870698843,3.5334642953663,2.90925151881133,3.72783522436244,42.1604347696628,33.7209197969663,1.78819938646014,0,0,0,50.4794454794253,73.2000964509802,14.9528679014309,95.0819031451752,92.82471101091,54.0248915854856,68.4658130145937,10.2857757488819,3.23458123586242,2.27450482590307,2.94618598241064,9.75903322220278,6.66716102857071,14.5850325142333,12.3577950625286,13.5392633311142,10.6334387836425,10.1197862524507,11.6416516832557,7.97601573851516,13.2374256117473,8.44565395986955,4.82230611340665,7.78532297831674,9.05455632957633,11.5237996388448,16.5198441459349,0,0,0,7.04227626620706,4.45599513964083,3.6012412292203,5.20838418287463,2.16440654922144,4.01094493507183,3.95307706075693,5.09719462659276,4.78737903705395,5.10135534731789,10.8350526292203,13.3763535750662,10.9649990568999,11.8557062257167,14.3600868073598,58.0400258036991,12.5543627102727,0.330418782983798,3.70230793328962,9.81125952462076,10.4506502337197,11.9846739029547,8.0673409849337,7.56085349072559,5.70676878337677,4.74529061544512,3.62337700392824,4.77536896720512,4.9739118010287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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:234889 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F8VQK3,uniprot:Q3TNN8,uniprot:Q3UH83 | |||
|association_with_transcript=6bp_to_ENSMUST00000115733,NM_001033322,uc009obc.1,uc009obd.1_5end | |||
|cluster_id=chr9:3532360..3532448,+ | |||
|description=CAGE_peak_1_at_Gucy1a2_5end | |||
|id=chr9:3532360..3532448,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.22e-07!23;CL:0000337!1.22e-07!23;CL:0000540!2.21e-07!33;CL:0000047!2.21e-07!33;CL:0000031!2.21e-07!33;CL:0000404!2.21e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.15e-07,23;CL:0000337,1.15e-07,23;CL:0000540,2.10e-07,33;CL:0000047,2.10e-07,33;CL:0000031,2.10e-07,33;CL:0000404,2.10e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.16e-14!73;UBERON:0005743!1.16e-14!73;UBERON:0002346!1.57e-14!71;UBERON:0003075!1.57e-14!71;UBERON:0007284!1.57e-14!71;UBERON:0001049!6.11e-14!52;UBERON:0005068!6.11e-14!52;UBERON:0006241!6.11e-14!52;UBERON:0007135!6.11e-14!52;UBERON:0000073!1.31e-13!75;UBERON:0001016!1.31e-13!75;UBERON:0000955!2.73e-13!50;UBERON:0006238!2.73e-13!50;UBERON:0004121!5.57e-13!102;UBERON:0000924!5.57e-13!102;UBERON:0006601!5.57e-13!102;UBERON:0002616!1.04e-12!49;UBERON:0000033!1.53e-12!63;UBERON:0000468!3.20e-12!333;UBERON:0002020!3.94e-12!34;UBERON:0003056!1.19e-10!49;UBERON:0000025!1.51e-10!114;UBERON:0003080!4.34e-10!40;UBERON:0002791!8.98e-10!29;UBERON:0003528!8.98e-10!29;UBERON:0001893!8.98e-10!29;UBERON:0002780!1.41e-09!39;UBERON:0001890!1.41e-09!39;UBERON:0006240!1.41e-09!39;UBERON:0000922!1.43e-09!328;UBERON:0004111!4.26e-09!122;UBERON:0002021!3.30e-08!10;UBERON:0000411!3.30e-08!10;UBERON:0001950!3.30e-08!10;UBERON:0000479!1.12e-07!349;UBERON:0000475!2.89e-07!200 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.37e-15,54;UBERON:0002346,7.84e-15,64;UBERON:0003075,7.84e-15,64;UBERON:0007284,7.84e-15,64;UBERON:0001017,1.24e-14,73;UBERON:0001049,5.07e-14,52;UBERON:0005068,5.07e-14,52;UBERON:0006241,5.07e-14,52;UBERON:0007135,5.07e-14,52;UBERON:0001016,1.94e-13,75;UBERON:0010314,5.19e-13,92;UBERON:0010371,6.15e-13,73;UBERON:0004121,1.06e-12,95;UBERON:0000924,1.06e-12,95;UBERON:0006601,1.06e-12,95;UBERON:0002020,3.29e-12,34;UBERON:0000955,1.12e-11,47;UBERON:0006238,1.12e-11,47;UBERON:0002616,4.07e-11,46;UBERON:0003056,1.02e-10,49;UBERON:0000025,1.27e-10,114;UBERON:0003080,3.75e-10,40;UBERON:0003528,7.71e-10,29;UBERON:0002791,7.71e-10,29;UBERON:0001893,7.71e-10,29;UBERON:0002780,1.22e-09,39;UBERON:0001890,1.22e-09,39;UBERON:0006240,1.22e-09,39;UBERON:0004111,3.50e-09,122;UBERON:0002021,3.11e-08,10;UBERON:0000411,3.11e-08,10;UBERON:0001950,3.11e-08,10;UBERON:0000922,8.53e-08,320;UBERON:0000479,3.48e-07,349 | |||
|phase1_expression=3.52327463630547,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,1.66554880907831,0.607425802169478,0,0,0.137114433605739,0,17.9441342218757,0.0992909512008853,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,3.9028013572429,5.17022349219524,3.85448179539531,2.34717403304412,2.8343270329458,0,1.55543919259427,0.55994568650145,0,0,0,0,7.20326420900652,8.30946975822394,14.9544906760458,13.7575193384526,7.93486468908049,15.8457850876545,0.338844532069132,0,0,0,0,2.99600110518405,4.61061966385865,9.64313394468842,7.1553147315796,8.41299845405528,22.2807767834967,18.9946945218388,8.94182834269164,10.9263836960789,6.43453150627015,88.092704799511,65.2482297615309,63.4394982348286,12.924856197559,15.4614117688072,20.8365348222704,32.6644108831616,25.3243174514256,32.2404302809069,33.2930301585245,30.3251680102089,16.0303523409758,0.757261933331841,2.41828992341714,4.63783181922684,12.0459342777394,0,1.61910957491345,1.94932925234301,1.34408066129201,6.60088774619234,0,0,0.35333957451034,5.35204995151386,0,0,0,0.216491041011214,0.506719730950197,0,4.90990682791958,20.9739685754209,10.3909497345377,8.15381035800839,8.8294988710521,6.22661842591358,6.33035090321015,10.4653949350777,7.53999547978053,6.42706916109372,16.7735254027098,0.884610551949874,3.558870698843,3.5334642953663,2.90925151881133,3.72783522436244,42.1604347696628,33.7209197969663,1.78819938646014,0,0,0,50.4794454794253,73.2000964509802,14.9528679014309,95.0819031451752,92.82471101091,54.0248915854856,68.4658130145937,10.2857757488819,3.23458123586242,2.27450482590307,2.94618598241064,9.75903322220278,6.66716102857071,14.5850325142333,12.3577950625286,13.5392633311142,10.6334387836425,10.1197862524507,11.6416516832557,7.97601573851516,13.2374256117473,8.44565395986955,4.82230611340665,7.78532297831674,9.05455632957633,11.5237996388448,16.5198441459349,0,0,0,7.04227626620706,4.45599513964083,3.6012412292203,5.20838418287463,2.16440654922144,4.01094493507183,3.95307706075693,5.09719462659276,4.78737903705395,5.10135534731789,10.8350526292203,13.3763535750662,10.9649990568999,11.8557062257167,14.3600868073598,58.0400258036991,12.5543627102727,0.330418782983798,3.70230793328962,9.81125952462076,10.4506502337197,11.9846739029547,8.0673409849337,7.56085349072559,5.70676878337677,4.74529061544512,3.62337700392824,4.77536896720512,4.97391180102877,4.48417400373976,2.69645822596266,2.59365659849633,3.58454291857861,5.69003702859245,14.2810640762161,23.6686244913469,15.0701982605533,14.3524840504043,13.9570281581734,25.2313783125787,23.9128439726956,17.583857518234,11.4759362447274,4.44678940630723,4.50481785433454,3.34150291692445,2.47348323623339,3.65148218499305,1.68824011826692,2.5462585178142,4.89083433666378,3.24270453550071,1.64736847912849,14.3768206527355,6.32639611036456,9.04909252032226,5.55673531483646,4.84373016509163,5.78932225636041,18.1058126363273,7.39016505904891,6.68156403412306,7.97801903143384,12.2038929110021,12.730475565578,13.5684875305028,17.5620283072019,18.4433118604243,22.589398344175,22.6425771493632,19.3358711364571,15.5416483679306,22.2759550215528,0,0,4.91764273019036,3.31124095565679,52.3394923360202,49.4633317419097,1.47541450839008,9.59389523376617,9.4652465824877,9.37052986311932,10.7711698866399,5.25731355495614,3.34198011123591,11.0399847007645,13.3587531552715,13.7360253218317,13.4397844501818,82.2582570039826,10.0777460497871,7.83488656135923,8.47012188638596,19.4664745107592,7.96470830039777,4.12727081463468,5.13950046840077,6.22396763194464,4.42952839321159,12.2974059177571,9.56184684722418,2.90826983582004,5.34746067577082,8.84902922220285,6.32511651449993,1.03135543248187,5.10659408630682,9.00305470156551,4.2688365648309,7.71613326113732,10.6404140185364,8.74007206250146,9.54384319492302,4.56697423671899,1.64270195644597,4.2366414172764,2.42581237860458,20.1161228588606,5.9741837877485,7.65974146587579,3.34242563208782,3.77524069413641,3.49777003955821,65.2697063076994,10.2522528478712,15.8917888331681,20.7417870654077,9.41842285023455,14.3528939107076,7.32090154260872,0,0,0,4.77335309007557,5.53587988766987,15.2489600345137,8.6404272657441,6.06356058441959,7.64268973111622,4.31565908431426,6.03370226794952,2.6175594198403,1.94422459937689,0,1.12738587736838,19.8857006238492,11.4166358415397,12.055973677331,8.13706887909706,9.96841140395591,10.3274370008263,5.9894017028217,3.04092098834561,2.65742532908607,3.74439008135225,4.10814456816632,4.45995473638361,7.39518891586756,5.71651621102298,6.08690765269437,5.76175928865668,1.32214994471966,2.95379054349154,2.22126189885925,1.600342939755,1.10908803650525,2.72882066071307,2.30908419936791,1.8700304349051,10.4295976462997,0,0,0,5.79568782096571,7.88266396894964,6.59345847362154,3.42989406526505,3.51100472824754,144.011719867352,123.367163383923,126.609908470107,88.3325357246554,94.5413877283486,120.863023582352,113.403780038943,96.3687374899832,106.035323702304,95.2678973623349,5.81209146471389,14.7639203158381,7.1708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| |||
|short_description=p1@Gucy1a2 | |||
}} |
Revision as of 01:02, 5 August 2015
Short description: | p1@Gucy1a2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gucy1a2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 6bp_to_ENSMUST00000115733, NM_001033322, uc009obc.1, uc009obd.1_5end |
EntrezGene: | 234889 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.15e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.15e-07 | 23 |
neuron | 2.10e-07 | 33 |
neuronal stem cell | 2.10e-07 | 33 |
neuroblast | 2.10e-07 | 33 |
electrically signaling cell | 2.10e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 3.37e-15 | 54 |
neurectoderm | 7.84e-15 | 64 |
neural plate | 7.84e-15 | 64 |
presumptive neural plate | 7.84e-15 | 64 |
central nervous system | 1.24e-14 | 73 |
neural tube | 5.07e-14 | 52 |
neural rod | 5.07e-14 | 52 |
future spinal cord | 5.07e-14 | 52 |
neural keel | 5.07e-14 | 52 |
nervous system | 1.94e-13 | 75 |
structure with developmental contribution from neural crest | 5.19e-13 | 92 |
ecto-epithelium | 6.15e-13 | 73 |
ectoderm-derived structure | 1.06e-12 | 95 |
ectoderm | 1.06e-12 | 95 |
presumptive ectoderm | 1.06e-12 | 95 |
gray matter | 3.29e-12 | 34 |
brain | 1.12e-11 | 47 |
future brain | 1.12e-11 | 47 |
regional part of brain | 4.07e-11 | 46 |
pre-chordal neural plate | 1.02e-10 | 49 |
tube | 1.27e-10 | 114 |
anterior neural tube | 3.75e-10 | 40 |
brain grey matter | 7.71e-10 | 29 |
regional part of telencephalon | 7.71e-10 | 29 |
telencephalon | 7.71e-10 | 29 |
regional part of forebrain | 1.22e-09 | 39 |
forebrain | 1.22e-09 | 39 |
future forebrain | 1.22e-09 | 39 |
anatomical conduit | 3.50e-09 | 122 |
occipital lobe | 3.11e-08 | 10 |
visual cortex | 3.11e-08 | 10 |
neocortex | 3.11e-08 | 10 |
embryo | 8.53e-08 | 320 |
tissue | 3.48e-07 | 349 |