FFCP PHASE1:Mm9::chr17:48439277..48439290,+: Difference between revisions
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{{FFCP|EntrezGene=328833|HGNC=|MCL_coexpression_id=48|UniProt=Q2LA85|association_with_transcript=12bp_to_ENSMUST00000095248,uc008cxe.1_5end|description=CAGE_peak_8_at_Treml2_5end|id=chr17:48439277..48439290,+|ontology_enrichment_celltype=CL:0000553!7.59e-12!6;CL:0000556!7.59e-12!6;CL:0000988!4.44e-08!32;CL:0002032!4.44e-08!32;CL:0000037!4.44e-08!32;CL:0000566!4.44e-08!32;CL:0000837!4.44e-08!32;CL:0000414!7.02e-08!11;CL:0000050!1.55e-07!9;CL:0002031!9.09e-07!25|ontology_enrichment_celltype_v019_2=CL:0000553,1.13e-28,6;CL:0000556,1.13e-28,6;CL:0000050,3.74e-19,9;CL:0000839,2.84e-13,13;CL:0000049,1.10e-12,19;CL:0000763,8.80e-11,16;CL:0000988,4.69e-10,32;CL:0002032,4.69e-10,32;CL:0000037,4.69e-10,32;CL:0000837,4.69e-10,32;CL:0002027,8.39e-10,3;CL:0002006,8.39e-10,3;CL:0002024,8.39e-10,3;CL:0002031,9.50e-10,25;CL:0000945,1.56e-08,1;CL:0000236,1.56e-08,1;CL:0000826,1.56e-08,1;CL:0002320,7.97e-07,46;CL:0000134,7.97e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002106!4.41e-08!6;UBERON:0004457!4.41e-08!6;UBERON:0000042!4.41e-08!6;UBERON:0004854!4.41e-08!6;UBERON:0009034!4.41e-08!6;UBERON:0002095!4.41e-08!6;UBERON:0004782!4.41e-08!6;UBERON:0003281!4.41e-08!6;UBERON:0009664!4.41e-08!6;UBERON:0002296!4.41e-08!6;UBERON:0005602!4.41e-08!6;UBERON:0001179!4.41e-08!6;UBERON:0006293!4.41e-08!6|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.45e-18,6;UBERON:0004457,2.45e-18,6;UBERON:0000042,2.45e-18,6;UBERON:0004854,2.45e-18,6;UBERON:0009034,2.45e-18,6;UBERON:0002095,2.45e-18,6;UBERON:0004782,2.45e-18,6;UBERON:0003281,2.45e-18,6;UBERON:0009664,2.45e-18,6;UBERON:0002296,2.45e-18,6;UBERON:0005602,2.45e-18,6;UBERON:0001179,2.45e-18,6;UBERON:0006293,2.45e-18,6;UBERON:0002193,2.78e-13,48;UBERON:0002405,2.78e-13,48;UBERON:0002390,1.77e-11,45;UBERON:0003061,1.77e-11,45;UBERON:0003887,3.97e-11,10;UBERON:0001474,6.66e-11,22;UBERON:0004765,6.66e-11,22;UBERON:0001434,6.66e-11,22;UBERON:0002371,8.80e-11,16;UBERON:0000029,4.10e-08,1;UBERON:0001097,4.10e-08,1;UBERON:0003968,4.10e-08,1;UBERON:0001467,4.10e-08,1;UBERON:0002204,2.12e-07,32;UBERON:0000945,4.87e-07,16;UBERON:0010039,4.87e-07,16;UBERON:0002384,7.97e-07,46;UBERON:0003081,8.36e-07,87|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0.140788722151667,0,0,0,0,0,1.33243904726265,1.82227740650843,0.699561878128147,10.7257136221801,10.2835825204304,8.48779303596061,0,0.397163804803541,0.261199789138935,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0.7813353445238,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,29.6975212722193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.58937883647172,0,0,0,0,0,0,0,0,0.144599356919912,0,0,1.10420759230197,0,0,0,0,0,0.359445373517761,1.19980546198682,0.254140454146129,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0.166845105716094,0,0.224862112384854,0.202860121388503,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0.472905432318573,0,0.159454768657487,0.491589944147214,0.172684981865896,0.723245292907558,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36696704638282,0,0.370389054739423,1.50694765603753,2.87057878214153,3.20289442489132,0.339956859987711,0.139951452323658,0.138199973804424,0,0.158167996790568,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p8@Treml2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:328833 | |||
|HGNC= | |||
|MCL_coexpression_id=48 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q2LA85 | |||
|association_with_transcript=12bp_to_ENSMUST00000095248,uc008cxe.1_5end | |||
|cluster_id=chr17:48439277..48439290,+ | |||
|description=CAGE_peak_8_at_Treml2_5end | |||
|id=chr17:48439277..48439290,+ | |||
|ontology_enrichment_celltype=CL:0000553!7.59e-12!6;CL:0000556!7.59e-12!6;CL:0000988!4.44e-08!32;CL:0002032!4.44e-08!32;CL:0000037!4.44e-08!32;CL:0000566!4.44e-08!32;CL:0000837!4.44e-08!32;CL:0000414!7.02e-08!11;CL:0000050!1.55e-07!9;CL:0002031!9.09e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.13e-28,6;CL:0000556,1.13e-28,6;CL:0000050,3.74e-19,9;CL:0000839,2.84e-13,13;CL:0000049,1.10e-12,19;CL:0000763,8.80e-11,16;CL:0000988,4.69e-10,32;CL:0002032,4.69e-10,32;CL:0000037,4.69e-10,32;CL:0000837,4.69e-10,32;CL:0002027,8.39e-10,3;CL:0002006,8.39e-10,3;CL:0002024,8.39e-10,3;CL:0002031,9.50e-10,25;CL:0000945,1.56e-08,1;CL:0000236,1.56e-08,1;CL:0000826,1.56e-08,1;CL:0002320,7.97e-07,46;CL:0000134,7.97e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!4.41e-08!6;UBERON:0004457!4.41e-08!6;UBERON:0000042!4.41e-08!6;UBERON:0004854!4.41e-08!6;UBERON:0009034!4.41e-08!6;UBERON:0002095!4.41e-08!6;UBERON:0004782!4.41e-08!6;UBERON:0003281!4.41e-08!6;UBERON:0009664!4.41e-08!6;UBERON:0002296!4.41e-08!6;UBERON:0005602!4.41e-08!6;UBERON:0001179!4.41e-08!6;UBERON:0006293!4.41e-08!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.45e-18,6;UBERON:0004457,2.45e-18,6;UBERON:0000042,2.45e-18,6;UBERON:0004854,2.45e-18,6;UBERON:0009034,2.45e-18,6;UBERON:0002095,2.45e-18,6;UBERON:0004782,2.45e-18,6;UBERON:0003281,2.45e-18,6;UBERON:0009664,2.45e-18,6;UBERON:0002296,2.45e-18,6;UBERON:0005602,2.45e-18,6;UBERON:0001179,2.45e-18,6;UBERON:0006293,2.45e-18,6;UBERON:0002193,2.78e-13,48;UBERON:0002405,2.78e-13,48;UBERON:0002390,1.77e-11,45;UBERON:0003061,1.77e-11,45;UBERON:0003887,3.97e-11,10;UBERON:0001474,6.66e-11,22;UBERON:0004765,6.66e-11,22;UBERON:0001434,6.66e-11,22;UBERON:0002371,8.80e-11,16;UBERON:0000029,4.10e-08,1;UBERON:0001097,4.10e-08,1;UBERON:0003968,4.10e-08,1;UBERON:0001467,4.10e-08,1;UBERON:0002204,2.12e-07,32;UBERON:0000945,4.87e-07,16;UBERON:0010039,4.87e-07,16;UBERON:0002384,7.97e-07,46;UBERON:0003081,8.36e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0.140788722151667,0,0,0,0,0,1.33243904726265,1.82227740650843,0.699561878128147,10.7257136221801,10.2835825204304,8.48779303596061,0,0.397163804803541,0.261199789138935,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0.7813353445238,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,29.6975212722193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.58937883647172,0,0,0,0,0,0,0,0,0.144599356919912,0,0,1.10420759230197,0,0,0,0,0,0.359445373517761,1.19980546198682,0.254140454146129,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0.166845105716094,0,0.224862112384854,0.202860121388503,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0.472905432318573,0,0.159454768657487,0.491589944147214,0.172684981865896,0.723245292907558,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36696704638282,0,0.370389054739423,1.50694765603753,2.87057878214153,3.20289442489132,0.339956859987711,0.139951452323658,0.138199973804424,0,0.158167996790568,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p8@Treml2 | |||
}} |
Revision as of 01:17, 5 August 2015
Short description: | p8@Treml2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Treml2_5end |
Coexpression cluster: | MCL_coexpression_mm9:48 |
Association with transcript: | 12bp_to_ENSMUST00000095248, uc008cxe.1_5end |
EntrezGene: | 328833 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.13e-28 | 6 |
megakaryocyte | 1.13e-28 | 6 |
megakaryocyte-erythroid progenitor cell | 3.74e-19 | 9 |
myeloid lineage restricted progenitor cell | 2.84e-13 | 13 |
common myeloid progenitor | 1.10e-12 | 19 |
myeloid cell | 8.80e-11 | 16 |
hematopoietic cell | 4.69e-10 | 32 |
hematopoietic oligopotent progenitor cell | 4.69e-10 | 32 |
hematopoietic stem cell | 4.69e-10 | 32 |
hematopoietic multipotent progenitor cell | 4.69e-10 | 32 |
CD9-positive, CD41-positive megakaryocyte cell | 8.39e-10 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 8.39e-10 | 3 |
Kit-positive megakaryocyte progenitor cell | 8.39e-10 | 3 |
hematopoietic lineage restricted progenitor cell | 9.50e-10 | 25 |
lymphocyte of B lineage | 1.56e-08 | 1 |
B cell | 1.56e-08 | 1 |
pro-B cell | 1.56e-08 | 1 |
connective tissue cell | 7.97e-07 | 46 |
mesenchymal cell | 7.97e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
spleen | 2.45e-18 | 6 |
cavity lining | 2.45e-18 | 6 |
serous membrane | 2.45e-18 | 6 |
gastrointestinal system mesentery | 2.45e-18 | 6 |
stomach region | 2.45e-18 | 6 |
mesentery | 2.45e-18 | 6 |
gastrointestinal system serosa | 2.45e-18 | 6 |
mesentery of stomach | 2.45e-18 | 6 |
gut mesentery | 2.45e-18 | 6 |
dorsal mesentery | 2.45e-18 | 6 |
dorsal mesogastrium | 2.45e-18 | 6 |
peritoneal cavity | 2.45e-18 | 6 |
spleen primordium | 2.45e-18 | 6 |
hemolymphoid system | 2.78e-13 | 48 |
immune system | 2.78e-13 | 48 |
hematopoietic system | 1.77e-11 | 45 |
blood island | 1.77e-11 | 45 |
intraembryonic coelom | 3.97e-11 | 10 |
bone element | 6.66e-11 | 22 |
skeletal element | 6.66e-11 | 22 |
skeletal system | 6.66e-11 | 22 |
bone marrow | 8.80e-11 | 16 |
lymph node | 4.10e-08 | 1 |
axillary lymph node | 4.10e-08 | 1 |
peripheral lymph node | 4.10e-08 | 1 |
shoulder | 4.10e-08 | 1 |
musculoskeletal system | 2.12e-07 | 32 |
stomach | 4.87e-07 | 16 |
food storage organ | 4.87e-07 | 16 |
connective tissue | 7.97e-07 | 46 |
lateral plate mesoderm | 8.36e-07 | 87 |