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FFCP PHASE1:Mm9::chr1:157264413..157264453,-: Difference between revisions

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{{FFCP|EntrezGene=19775|HGNC=|UniProt=Q9Z0U0|association_with_transcript=0bp_to_ENSMUST00000027741_5end|description=CAGE_peak_3_at_Xpr1_5end|id=chr1:157264413..157264453,-|ontology_enrichment_celltype=CL:0000117!6.34e-10!23;CL:0000337!6.34e-10!23|ontology_enrichment_celltype_v019_2=CL:0000117,6.00e-10,23;CL:0000337,6.00e-10,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!1.71e-13!34;UBERON:0002791!7.13e-11!29;UBERON:0003528!7.13e-11!29;UBERON:0001893!7.13e-11!29;UBERON:0002346!3.57e-10!71;UBERON:0003075!3.57e-10!71;UBERON:0007284!3.57e-10!71;UBERON:0001049!4.43e-10!52;UBERON:0005068!4.43e-10!52;UBERON:0006241!4.43e-10!52;UBERON:0007135!4.43e-10!52;UBERON:0003056!1.45e-09!49;UBERON:0000033!1.63e-09!63;UBERON:0000955!5.73e-09!50;UBERON:0006238!5.73e-09!50;UBERON:0003080!1.07e-08!40;UBERON:0002616!1.93e-08!49;UBERON:0002780!2.42e-08!39;UBERON:0001890!2.42e-08!39;UBERON:0006240!2.42e-08!39;UBERON:0001017!3.17e-08!73;UBERON:0005743!3.17e-08!73;UBERON:0000956!5.76e-08!21;UBERON:0001869!5.76e-08!21;UBERON:0000203!5.76e-08!21;UBERON:0004121!1.16e-07!102;UBERON:0000924!1.16e-07!102;UBERON:0006601!1.16e-07!102;UBERON:0000073!2.27e-07!75;UBERON:0001016!2.27e-07!75;UBERON:0002619!9.51e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.79e-13,34;UBERON:0003528,7.54e-11,29;UBERON:0002791,7.54e-11,29;UBERON:0001893,7.54e-11,29;UBERON:0000073,1.13e-10,54;UBERON:0001049,4.59e-10,52;UBERON:0005068,4.59e-10,52;UBERON:0006241,4.59e-10,52;UBERON:0007135,4.59e-10,52;UBERON:0002346,6.31e-10,64;UBERON:0003075,6.31e-10,64;UBERON:0007284,6.31e-10,64;UBERON:0003056,1.78e-09,49;UBERON:0003080,1.33e-08,40;UBERON:0002780,3.01e-08,39;UBERON:0001890,3.01e-08,39;UBERON:0006240,3.01e-08,39;UBERON:0000955,3.52e-08,47;UBERON:0006238,3.52e-08,47;UBERON:0001017,3.70e-08,73;UBERON:0000956,6.19e-08,21;UBERON:0001869,6.19e-08,21;UBERON:0000203,6.19e-08,21;UBERON:0002616,1.15e-07,46;UBERON:0010371,1.44e-07,73;UBERON:0001016,3.07e-07,75;UBERON:0004121,3.41e-07,95;UBERON:0000924,3.41e-07,95;UBERON:0006601,3.41e-07,95|phase1_expression=1.44133962394315,7.32848356042658,8.64498554840118,17.845388467103,21.5385163876929,2.01455126294268,1.16806320297763,1.93684985162364,4.22366166455,4.91535505276186,0.34243593645101,0.717949430958028,1.36960583944965,1.04904482902797,1.99865857089398,2.22722794128809,2.79824751251259,1.26184866143295,2.74228867211478,1.27316895539409,2.89147186513637,1.39007331681239,1.04479915655574,2.23989391910769,2.98232065387321,11.4846392823004,6.46142994238612,4.52489588640367,12.1614988452079,5.79669298447841,2.43903561720835,0,3.07532393792285,0,1.44425809875637,1.32987716286794,1.22501613757421,3.76678467663217,2.3440060335714,1.0470474879476,3.52938892818609,5.46436387966757,6.79714494243615,3.02152363141385,2.73717714292689,5.87349606917381,0,2.61630187656536,2.85592037554813,3.4997381833371,0.55994568650145,4.31257693094915,2.18117387875057,3.62681071005672,3.6970317905671,2.82985379639542,2.0057340795713,3.09403255366465,8.29497489524351,10.5798195854407,7.60597684207415,0.677689064138264,0.889294796111139,1.3498495759221,4.94433181283487,0,1.49800055259202,0.384218305321555,5.70292867696627,5.13022565660425,3.78584930432488,5.99867067247988,7.28866185140325,7.4719387521122,8.72193786265951,8.27296907949019,4.40463523997555,4.85211884723713,4.45458946443106,9.62769900430415,12.0763689555181,13.022834263919,1.67509799400829,4.50210088025344,5.65353516774197,10.0173719061047,11.5321061447273,12.4887628702951,1.13589289999776,0.982430281388212,1.15945795480671,0.860423876981386,2.03991400112325,2.69851595818909,4.54843492213368,4.48026887097336,2.66844398250329,1.36344258062446,1.29893002301434,0.35333957451034,2.39433813620357,5.13305909657271,2.54805239706646,7.11066703153331,0.649473123033642,0,0,4.5673551887624,3.10725460376606,2.67195850316685,2.08182392119363,3.04465478312141,4.61230994512117,3.01445281105245,4.8211369925639,2.38766523526383,4.20231445148436,4.19338135067744,1.76922110389975,2.75003644910596,3.5334642953663,3.39412677194655,7.45567044872489,1.46390398505774,4.1889341362691,7.15279754584056,0.838705871541442,0.599902730993408,0.254140454146129,5.99162557619291,12.8100168789215,19.6020789296068,7.30062144807561,6.13717097592793,7.06479351502504,7.78758062725237,2.34230536855727,3.35898820647251,4.29628689337247,3.57751155007006,2.08192708740326,2.75882525320168,2.16074555766419,4.37043971723574,4.83059143974428,4.35586648968489,3.93547243150861,9.05461797586555,0,1.89106080167819,2.11141348996739,0.876782929710299,1.66828349535359,0.696504333044333,3.08673204611915,1.19420560091096,0.702213187313235,0.51469581422943,0.284163499395593,1.24275463521301,2.11073453982987,2.16074473753218,1.89395788468168,2.36117078096885,2.00547246753592,0.930135779001631,0.804820204198858,1.5179494507732,0.987359099480883,1.64167464079095,2.1888578577381,1.90059983652932,1.3173006917463,1.74468344388483,9.67333763394985,8.23236899034275,15.8601015832223,3.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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:19775
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q9Z0U0
|association_with_transcript=0bp_to_ENSMUST00000027741_5end
|cluster_id=chr1:157264413..157264453,-
|description=CAGE_peak_3_at_Xpr1_5end
|id=chr1:157264413..157264453,-
|ontology_enrichment_celltype=CL:0000117!6.34e-10!23;CL:0000337!6.34e-10!23
|ontology_enrichment_celltype_v019_2=CL:0000117,6.00e-10,23;CL:0000337,6.00e-10,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!1.71e-13!34;UBERON:0002791!7.13e-11!29;UBERON:0003528!7.13e-11!29;UBERON:0001893!7.13e-11!29;UBERON:0002346!3.57e-10!71;UBERON:0003075!3.57e-10!71;UBERON:0007284!3.57e-10!71;UBERON:0001049!4.43e-10!52;UBERON:0005068!4.43e-10!52;UBERON:0006241!4.43e-10!52;UBERON:0007135!4.43e-10!52;UBERON:0003056!1.45e-09!49;UBERON:0000033!1.63e-09!63;UBERON:0000955!5.73e-09!50;UBERON:0006238!5.73e-09!50;UBERON:0003080!1.07e-08!40;UBERON:0002616!1.93e-08!49;UBERON:0002780!2.42e-08!39;UBERON:0001890!2.42e-08!39;UBERON:0006240!2.42e-08!39;UBERON:0001017!3.17e-08!73;UBERON:0005743!3.17e-08!73;UBERON:0000956!5.76e-08!21;UBERON:0001869!5.76e-08!21;UBERON:0000203!5.76e-08!21;UBERON:0004121!1.16e-07!102;UBERON:0000924!1.16e-07!102;UBERON:0006601!1.16e-07!102;UBERON:0000073!2.27e-07!75;UBERON:0001016!2.27e-07!75;UBERON:0002619!9.51e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.79e-13,34;UBERON:0003528,7.54e-11,29;UBERON:0002791,7.54e-11,29;UBERON:0001893,7.54e-11,29;UBERON:0000073,1.13e-10,54;UBERON:0001049,4.59e-10,52;UBERON:0005068,4.59e-10,52;UBERON:0006241,4.59e-10,52;UBERON:0007135,4.59e-10,52;UBERON:0002346,6.31e-10,64;UBERON:0003075,6.31e-10,64;UBERON:0007284,6.31e-10,64;UBERON:0003056,1.78e-09,49;UBERON:0003080,1.33e-08,40;UBERON:0002780,3.01e-08,39;UBERON:0001890,3.01e-08,39;UBERON:0006240,3.01e-08,39;UBERON:0000955,3.52e-08,47;UBERON:0006238,3.52e-08,47;UBERON:0001017,3.70e-08,73;UBERON:0000956,6.19e-08,21;UBERON:0001869,6.19e-08,21;UBERON:0000203,6.19e-08,21;UBERON:0002616,1.15e-07,46;UBERON:0010371,1.44e-07,73;UBERON:0001016,3.07e-07,75;UBERON:0004121,3.41e-07,95;UBERON:0000924,3.41e-07,95;UBERON:0006601,3.41e-07,95
|phase1_expression=1.44133962394315,7.32848356042658,8.64498554840118,17.845388467103,21.5385163876929,2.01455126294268,1.16806320297763,1.93684985162364,4.22366166455,4.91535505276186,0.34243593645101,0.717949430958028,1.36960583944965,1.04904482902797,1.99865857089398,2.22722794128809,2.79824751251259,1.26184866143295,2.74228867211478,1.27316895539409,2.89147186513637,1.39007331681239,1.04479915655574,2.23989391910769,2.98232065387321,11.4846392823004,6.46142994238612,4.52489588640367,12.1614988452079,5.79669298447841,2.43903561720835,0,3.07532393792285,0,1.44425809875637,1.32987716286794,1.22501613757421,3.76678467663217,2.3440060335714,1.0470474879476,3.52938892818609,5.46436387966757,6.79714494243615,3.02152363141385,2.73717714292689,5.87349606917381,0,2.61630187656536,2.85592037554813,3.4997381833371,0.55994568650145,4.31257693094915,2.18117387875057,3.62681071005672,3.6970317905671,2.82985379639542,2.0057340795713,3.09403255366465,8.29497489524351,10.5798195854407,7.60597684207415,0.677689064138264,0.889294796111139,1.3498495759221,4.94433181283487,0,1.49800055259202,0.384218305321555,5.70292867696627,5.13022565660425,3.78584930432488,5.99867067247988,7.28866185140325,7.4719387521122,8.72193786265951,8.27296907949019,4.40463523997555,4.85211884723713,4.45458946443106,9.62769900430415,12.0763689555181,13.022834263919,1.67509799400829,4.50210088025344,5.65353516774197,10.0173719061047,11.5321061447273,12.4887628702951,1.13589289999776,0.982430281388212,1.15945795480671,0.860423876981386,2.03991400112325,2.69851595818909,4.54843492213368,4.48026887097336,2.66844398250329,1.36344258062446,1.29893002301434,0.35333957451034,2.39433813620357,5.13305909657271,2.54805239706646,7.11066703153331,0.649473123033642,0,0,4.5673551887624,3.10725460376606,2.67195850316685,2.08182392119363,3.04465478312141,4.61230994512117,3.01445281105245,4.8211369925639,2.38766523526383,4.20231445148436,4.19338135067744,1.76922110389975,2.75003644910596,3.5334642953663,3.39412677194655,7.45567044872489,1.46390398505774,4.1889341362691,7.15279754584056,0.838705871541442,0.599902730993408,0.254140454146129,5.99162557619291,12.8100168789215,19.6020789296068,7.30062144807561,6.13717097592793,7.06479351502504,7.78758062725237,2.34230536855727,3.35898820647251,4.29628689337247,3.57751155007006,2.08192708740326,2.75882525320168,2.16074555766419,4.37043971723574,4.83059143974428,4.35586648968489,3.93547243150861,9.05461797586555,0,1.89106080167819,2.11141348996739,0.876782929710299,1.66828349535359,0.696504333044333,3.08673204611915,1.19420560091096,0.702213187313235,0.51469581422943,0.284163499395593,1.24275463521301,2.11073453982987,2.16074473753218,1.89395788468168,2.36117078096885,2.00547246753592,0.930135779001631,0.804820204198858,1.5179494507732,0.987359099480883,1.64167464079095,2.1888578577381,1.90059983652932,1.3173006917463,1.74468344388483,9.67333763394985,8.23236899034275,15.8601015832223,3.43785736662608,1.06644125267617,0.928946687441754,1.41754207454303,2.42020229548011,4.44756087689741,4.94586627892654,11.8632265386128,9.38784041926862,4.02136334080431,5.57078121715222,7.79856348476481,4.49409704327111,7.99710784536369,11.1519113022446,1.32767530667157,1.48523066392647,2.25415471346161,2.24016460629846,3.49114476901726,4.83937157243198,5.50157872981038,11.0707610984702,13.1878931386755,15.1778511623815,8.00422093135302,1.83529616287703,2.55526693647164,1.12431056192427,1.62288097110802,1.92941727801933,1.52775511068852,1.15078454980324,1.45921704097532,1.64736847912849,0,1.48856379067401,1.24815069245824,2.27320990152401,2.33216637578486,2.41221760681684,2.58654466233247,0.568474235311454,1.30371981153621,1.01847051465113,2.11221223459652,2.68010011906905,2.85652369063216,3.90267295715598,4.72905432318573,3.76489972402917,2.87018583583477,4.42430949732493,3.7990696010497,3.32692834737477,9.04747703635634,4.35124547054968,0,2.48343071674259,3.69266356971921,3.04750385139728,2.29508923527346,2.7771801992481,1.26203287766503,1.56175497718655,2.36965737506079,0.955875191810208,2.89638276307112,1.98153571552183,2.02405350837447,2.63030272120181,1.58115111178609,16.0660658210904,2.83880170416537,0.712262414669021,2.76907830901079,1.48473110675282,0,0.971122544619926,0,0.377210159511796,1.18120757152309,0.614870295887855,1.55056975900933,2.54473610634254,0,2.21225730555071,0,0,1.36175842301515,2.52085531643834,1.68166288917581,1.92903331528433,2.48276327099183,1.96205699362278,3.1264313914403,0.913394847343798,2.11204537257339,2.33015277950202,1.54369878638473,1.97863503529776,3.39075296061402,1.32688434841943,1.79058516004705,1.64140899745061,7.86998258900597,4.07935664423121,2.73393409276564,2.27025554759545,1.85194527369712,3.20226376907975,3.00727300986255,2.28778173206523,1.5298058699447,1.11961161858926,0.829199842826543,0,0.949007980743406,1.62655573701479,1.72808545314882,2.92723614420256,3.27543845619266,2.42755823492677,1.81837602595739,2.09404753587224,4.66613903850454,14.9121435140862,0,2.54178128274764,1.65458490457098,2.91676782516071,1.6790777052105,2.36538575687089,3.0512882047896,2.8644964665669,1.8874681996628,0.241584120826006,0.576060012515731,3.16011120628178,0.202725215290164,0.821687657318618,0.909445760844565,0.537080087002444,1.58945083825012,2.16351809135944,2.51072196196781,2.42319479875554,1.98137697303,2.31900225814733,2.14407337627455,2.02044867444692,1.75315353272353,1.81384306892169,0.443971906748129,1.79427713218951,1.84673078000486,2.89784391048286,1.12609485270709,2.19781949120718,1.50057865355346,1.50471631210609,14.1187960654267,11.0478056761722,10.8850147553485,6.01486138202907,9.59115527678899,0.755393897389701,6.75022500231806,8.10578165803597,4.53142408984205,6.21312374102184,0.830298780673413,1.59609949360412,2.39027048055788,3.16038732188782,2.09613162627982,2.75765262675021,4.00044110042907,3.5025959730612,4.49286893428541,2.52697211763797,2.78827229879264,3.58390048633545,1.77918864192777,3.77748399188729,3.4461281373368,3.81034953026459,3.47652977834566,2.50781986602817,2.88460130562315,2.64958056241915,2.74295401908332,1.77475806159337,4.05341522910446,3.19762116591123,4.32903149910521,3.13074049199203,2.37806364734604,3.94604567156764,3.93831930152999,4.48913817326191,3.2031454893527,2.9551344712669,2.86461730218783,2.94379998253335,2.89359916471712,4.74640098082097,2.33931608445408,4.94203424311086,2.67803664896381,3.52946270591225,2.78241402744506
|short_description=p3@Xpr1
}}

Revision as of 01:21, 5 August 2015

Short description:p3@Xpr1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Xpr1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000027741_5end
EntrezGene:19775
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p3@Xpr1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I57.33
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I68.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I317.85
CD326+ enterocyte, pool2.CNhs13197.11849-124I421.54
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.94
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.22
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.92
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.72
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.37
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.05
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.23
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.26
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.74
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.39
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.98
GP2+ M cell, pool1.CNhs13228.11845-124H911.48
GP2+ M cell, pool2.CNhs13231.11846-124I16.46
GP2+ M cell, pool3.CNhs13240.11847-124I24.52
Ileum epithelium, pool1.CNhs13199.10252-104B912.16
Ileum epithelium, pool2.CNhs13232.10253-104C15.80
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.77
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G93.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H25.46
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H46.80
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.02
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.74
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.87
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.62
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.86
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.18
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.70
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.83
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C38.29
Mouse Granule cells, donor2.CNhs12357.11731-123E310.58
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.70
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.13
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.79
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.29
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.47
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.72
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.85
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.63
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F412.08
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D813.02
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.65
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.02
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F611.53
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E112.49
Mouse Schwann, donor1.CNhs12507.11728-123D91.14
Mouse Schwann, donor2.CNhs12573.11746-123F90.98
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F44.55
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.48
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.39
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.57
accessory axillary lymph node, adult.CNhs10475.1063-29H93.11
adrenal gland, adult.CNhs10508.49-24D72.67
adrenal gland, embryo E14.CNhs11038.406-44C52.08
adrenal gland, embryo E16.CNhs11004.1254-43D63.04
adrenal gland, embryo E17.CNhs11043.1263-45I14.61
adrenal gland, embryo E18.CNhs11026.1262-18F53.01
adrenal gland, neonate N00.CNhs11191.1311-23C14.82
adrenal gland, neonate N25.CNhs11223.1377-27I32.39
amnion, adult pregnant day17.5.CNhs10488.583-22A84.20
aorta, adult.CNhs10498.46-23H14.19
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F52.75
bone (os femoris), neonate N16.CNhs11225.1525-43A63.53
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I24.19
colon, adult.CNhs10468.36-18H77.15
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A45.99
corpus striatum, adult.CNhs10487.19-21D812.81
corpus striatum, neonate N00.CNhs11226.630-43F119.60
cortex, adult.CNhs10473.12-14D57.30
cortex, neonate N30.CNhs11107.1392-42F26.14
diencephalon, adult.CNhs10482.20-12F27.06
diencephalon, neonate N30.CNhs11201.1388-42B27.79
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.34
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.36
epididymis, adult.CNhs10490.58-23B24.30
eyeball, adult.CNhs10484.31-12G43.58
eyeball, embryo E12.CNhs11016.345-16C62.08
eyeball, embryo E14.CNhs10521.399-16E22.76
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D44.37
eyeball, neonate N00.CNhs11207.633-15C64.83
eyeball, neonate N01.CNhs11140.1532-43E74.36
eyeball, neonate N02.CNhs11205.1551-44G83.94
eyeball, neonate N16.CNhs11188.777-19A29.05
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E22.11
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B53.09
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I92.16
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C82.36
heart, embryo E16.CNhs11021.457-17C62.01
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E31.52
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G12.19
heart, neonate N20.CNhs11127.821-26I61.90
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D21.74
hippocampus, adult.CNhs10478.13-16E89.67
hippocampus, neonate N00.CNhs11228.627-43G18.23
intestinal mucosa, adult.CNhs10506.860-29I315.86
intestine, adult.CNhs10496.178-9A33.44
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D81.42
intestine, embryo E16.CNhs10585.463-22H42.42
intestine, embryo E17.CNhs10582.482-18D34.45
intestine, embryo E18.CNhs10526.1289-20F74.95
intestine, neonate N00.CNhs11126.644-26D111.86
intestine, neonate N01.CNhs11192.1322-23E99.39
intestine, neonate N06.CNhs11102.688-20B84.02
intestine, neonate N07.CNhs11095.720-20F25.57
intestine, neonate N10.CNhs11098.755-23A57.80
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E38.00
intestine, neonate N30.CNhs11131.1384-42G111.15
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F81.49
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.24
kidney, embryo E18.CNhs11001.1288-20C73.49
kidney, neonate N00.CNhs11214.646-21G74.84
kidney, neonate N10.CNhs11206.758-6D55.50
kidney, neonate N20.CNhs11113.832-19I111.07
kidney, neonate N25.CNhs11122.1353-25F313.19
kidney, neonate N30.CNhs11203.1385-42H115.18
liver, adult pregnant day01.CNhs10466.508-5B28.00
liver, embryo E12.CNhs10601.355-15F81.84
liver, embryo E13.CNhs10524.378-3H62.56
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D71.62
liver, embryo E16.CNhs10523.462-17F51.93
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F41.46
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A32.27
liver, neonate N25.CNhs11198.1368-26H12.33
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B12.59
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B62.11
lung, embryo E17.CNhs10605.480-44A62.68
lung, embryo E18.CNhs10583.1287-20I62.86
lung, neonate N00.CNhs11224.640-42C63.90
lung, neonate N06.CNhs11212.683-20E54.73
lung, neonate N07.CNhs11111.715-19A33.76
lung, neonate N10.CNhs11219.750-23E62.87
lung, neonate N20.CNhs11109.822-18A44.42
lung, neonate N25.CNhs11119.1359-25C73.80
lung, neonate N30.CNhs11133.1394-42H23.33
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.35
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H22.48
medulla oblongata, adult.CNhs10477.17-12C23.69
medulla oblongata, neonate N30.CNhs11200.1396-42A33.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.30
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.78
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I916.07
ovary, adult.CNhs10507.91-2I72.84
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I42.77
oviduct, adult pregnant day01.CNhs10500.988-6G61.48
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E62.52
pituitary gland, embryo E13.CNhs11009.370-44C71.68
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B92.48
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F53.13
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G32.33
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C31.98
skin, neonate N00.CNhs11124.650-25G43.39
skin, neonate N03.CNhs11215.662-22H31.33
skin, neonate N06.CNhs11097.693-20I51.79
skin, neonate N10.CNhs11108.762-6C41.64
small intestine, neonate N16.CNhs11114.790-21I17.87
spinal cord, adult.CNhs10505.24-13C94.08
spleen, adult.CNhs10465.25-2G22.73
spleen, embryo E16.CNhs11035.461-43C12.27
spleen, embryo E18.CNhs11011.1271-21F21.85
spleen, neonate N10.CNhs11116.752-24D13.20
spleen, neonate N20.CNhs11112.824-19H13.01
spleen, neonate N25.CNhs11099.1354-25G32.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D41.73
stomach, embryo E17.CNhs11006.1035-18D52.93
stomach, embryo E18.CNhs10999.1286-20C63.28
stomach, neonate N03.CNhs11193.1340-24B82.43
stomach, neonate N07.CNhs11210.718-18A91.82
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I14.67
submandibular gland, adult.CNhs10469.59-29C114.91
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F52.54
testis, embryo E15.CNhs11034.443-27C51.65
testis, embryo E16.CNhs11033.470-26G52.92
testis, embryo E17.CNhs11029.486-18I51.68
testis, embryo E18.CNhs11027.503-18G52.37
testis, neonate N00.CNhs11189.1300-22B73.05
testis, neonate N07.CNhs11222.726-26I42.86
testis, neonate N10.CNhs11204.763-44D91.89
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G41.59
thymus, neonate N02.CNhs11181.1541-43F82.16
thymus, neonate N03.CNhs11137.2104-43C72.51
thymus, neonate N06.CNhs11197.681-26C42.42
thymus, neonate N07.CNhs11211.713-19D31.98
thymus, neonate N10.CNhs11194.748-24E42.32
thymus, neonate N20.CNhs11186.820-7A22.14
thymus, neonate N25.CNhs11125.1362-25G72.02
thymus, neonate N30.CNhs11132.1393-42G21.75
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.79
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.85
urinary bladder, adult.CNhs10481.879-12E42.90
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E52.20
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A114.12
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.05
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.89
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.01
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A49.59
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.21
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F22.76
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.45
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.13
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.95
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.96
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.94
whole body, embryo E17.5.CNhs10513.490-9F92.89
whole body, embryo E17.CNhs10517.475-3I54.75
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C24.94
whole body, neonate N01.CNhs10576.659-23C62.68
whole body, neonate N06.CNhs10515.692-21D13.53
whole body, neonate N10.CNhs10518.761-6B42.78





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.00e-1023
neuroblast (sensu Vertebrata)6.00e-1023

Uber anatomy
Ontology termp-valuen
gray matter1.79e-1334
brain grey matter7.54e-1129
regional part of telencephalon7.54e-1129
telencephalon7.54e-1129
regional part of nervous system1.13e-1054
neural tube4.59e-1052
neural rod4.59e-1052
future spinal cord4.59e-1052
neural keel4.59e-1052
neurectoderm6.31e-1064
neural plate6.31e-1064
presumptive neural plate6.31e-1064
pre-chordal neural plate1.78e-0949
anterior neural tube1.33e-0840
regional part of forebrain3.01e-0839
forebrain3.01e-0839
future forebrain3.01e-0839
brain3.52e-0847
future brain3.52e-0847
central nervous system3.70e-0873
cerebral cortex6.19e-0821
cerebral hemisphere6.19e-0821
pallium6.19e-0821
regional part of brain1.15e-0746
ecto-epithelium1.44e-0773
nervous system3.07e-0775
ectoderm-derived structure3.41e-0795
ectoderm3.41e-0795
presumptive ectoderm3.41e-0795
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