FFCP PHASE1:Mm9::chr12:50485973..50486015,+: Difference between revisions
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{{FFCP|EntrezGene=15228|HGNC=|MCL_coexpression_id=76|UniProt=E9PYS1,Q8C9D9|association_with_transcript=-145bp_to_ENSMUST00000110746,uc007nmg.1_5end|description=CAGE_peak_2_at_Foxg1_5end|id=chr12:50485973..50486015,+|ontology_enrichment_celltype=CL:0000055!1.93e-10!50;CL:0000221!7.34e-10!44;CL:0000133!7.34e-10!44;CL:0002319!3.02e-09!43;CL:0002609!8.90e-08!6;CL:0000393!1.03e-07!39;CL:0000211!1.03e-07!39|ontology_enrichment_celltype_v019_2=CL:0002609,1.39e-13,6;CL:0002453,8.75e-11,8;CL:0000221,3.12e-10,44;CL:0000133,3.12e-10,44;CL:0002319,2.67e-09,43;CL:0000333,2.08e-08,10;CL:0000095,2.08e-08,10;CL:0000243,2.08e-08,10;CL:0000123,2.08e-08,10;CL:0000125,2.08e-08,10;CL:0000030,2.08e-08,10;CL:0000339,2.08e-08,10;CL:0000128,3.65e-08,6;CL:0000126,3.65e-08,6;CL:0000127,3.65e-08,6;CL:0002321,4.46e-08,70;CL:0002608,2.03e-07,3;CL:0000393,8.69e-07,39;CL:0000211,8.69e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002791!1.83e-24!29;UBERON:0003528!1.83e-24!29;UBERON:0001893!1.83e-24!29;UBERON:0000956!1.74e-21!21;UBERON:0001869!1.74e-21!21;UBERON:0000203!1.74e-21!21;UBERON:0002780!3.08e-19!39;UBERON:0001890!3.08e-19!39;UBERON:0006240!3.08e-19!39;UBERON:0002020!3.60e-19!34;UBERON:0003080!1.88e-18!40;UBERON:0001017!1.71e-17!73;UBERON:0005743!1.71e-17!73;UBERON:0002619!3.06e-17!17;UBERON:0000955!4.43e-17!50;UBERON:0006238!4.43e-17!50;UBERON:0000073!1.37e-16!75;UBERON:0001016!1.37e-16!75;UBERON:0002616!3.02e-16!49;UBERON:0003056!2.25e-15!49;UBERON:0000033!4.74e-15!63;UBERON:0001049!1.04e-12!52;UBERON:0005068!1.04e-12!52;UBERON:0006241!1.04e-12!52;UBERON:0007135!1.04e-12!52;UBERON:0007811!2.84e-11!86;UBERON:0004121!2.11e-10!102;UBERON:0000924!2.11e-10!102;UBERON:0006601!2.11e-10!102;UBERON:0002021!4.13e-10!10;UBERON:0000411!4.13e-10!10;UBERON:0001950!4.13e-10!10;UBERON:0000153!4.18e-09!94;UBERON:0001954!1.44e-08!7;UBERON:0003022!1.44e-08!7;UBERON:0002421!1.44e-08!7;UBERON:0000349!1.44e-08!7;UBERON:0002600!1.44e-08!7;UBERON:0002346!1.70e-08!71;UBERON:0003075!1.70e-08!71;UBERON:0007284!1.70e-08!71|ontology_enrichment_uberon_v019_2=UBERON:0000956,3.45e-40,21;UBERON:0001869,3.45e-40,21;UBERON:0000203,3.45e-40,21;UBERON:0003528,8.56e-37,29;UBERON:0002791,8.56e-37,29;UBERON:0001893,8.56e-37,29;UBERON:0002619,6.32e-32,17;UBERON:0002020,2.13e-30,34;UBERON:0002780,5.15e-28,39;UBERON:0001890,5.15e-28,39;UBERON:0006240,5.15e-28,39;UBERON:0003080,3.84e-27,40;UBERON:0000955,2.00e-26,47;UBERON:0006238,2.00e-26,47;UBERON:0002616,6.85e-25,46;UBERON:0001017,3.04e-24,73;UBERON:0001016,2.28e-23,75;UBERON:0001049,3.34e-21,52;UBERON:0005068,3.34e-21,52;UBERON:0006241,3.34e-21,52;UBERON:0007135,3.34e-21,52;UBERON:0003056,6.72e-21,49;UBERON:0000073,3.72e-20,54;UBERON:0002021,4.32e-18,10;UBERON:0000411,4.32e-18,10;UBERON:0001950,4.32e-18,10;UBERON:0004121,6.48e-18,95;UBERON:0000924,6.48e-18,95;UBERON:0006601,6.48e-18,95;UBERON:0002346,6.47e-16,64;UBERON:0003075,6.47e-16,64;UBERON:0007284,6.47e-16,64;UBERON:0001954,4.13e-15,7;UBERON:0003022,4.13e-15,7;UBERON:0002421,4.13e-15,7;UBERON:0000349,4.13e-15,7;UBERON:0002600,4.13e-15,7;UBERON:0010371,2.47e-14,73;UBERON:0010314,8.16e-11,92;UBERON:0000025,5.22e-09,114;UBERON:0004111,1.03e-08,122|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14742044938943,2.33166941804883,2.75320128242522,0,5.66865406589161,10.1055644057857,6.80504646759992,1.81982348112971,1.43752564364972,0,0,0,1.02903774414379,0,0,0,0,0,11.8595586224196,0.889294796111139,0,0,0,1.19840044207362,1.53687322128622,16.7977171939734,20.3858966880853,13.2504725651371,0,0,9.43179153955146,10.2554653989513,7.35375029288017,0,0.383062014255563,0.614426133024974,0.263772575460388,0.365950574409639,0.52091337055676,0,0.56276261003168,2.90316670775939,0,0,0,0,0,0,0,0,0,0,0,0,0.852151612890289,0.259786004602869,1.06001872353102,2.25349471642689,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,7.32000964509802,6.65968066198181,3.65031072403781,3.58001640262463,0.83115217823824,2.92034273521964,0,0,0,0,0.130120442962704,0.229902104433473,0,0,0.136072998302656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,7.99101804543684,9.67303356365274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0,0,0,0,1.63934945376675,0,0,0.390438744296638,0,1.19484398976276,0.891194696329576,0.283076530788832,0,1.16902343164525,1.97643888973262,4.81981974632711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.410843828659309,0.389762468933385,0,0,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0.194915761479505,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,2.30162618253588,5.15605962095457,2.40594455281163,2.05524755931193,6.0431511791176,4.72515750162264,3.60256962579376,3.17199686288943,3.62432218226274,0.415149390336707,1.59609949360412,0.512200817262403,0.972426868273176,1.88651846365184,0.735374033800057,0.44449345560323,0.412070114477788,0.64183841918363,0.505394423527595,0.50695859978048,1.13175804831646,0.280924522409647,0.512201219238954,0.459483751644906,0.476293691283074,0.231768651889711,0.38581844092741,0.824171801606613,0.441596760403192,0.342869252385415,0.532427418478012,0,0.581385666529314,0.658765662907314,0.423073039458382,0.914639864363863,0.526139422875686,0.679020569229309,1.68342681497322,0.949080144993393,0.492522411877817,0.409231043169689,0.464810523557898,0.192906610981141,1.24905288968973,0.467863216890817,0.859484216193193,0,0,0|short_description=p2@Foxg1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:15228 | |||
|HGNC= | |||
|MCL_coexpression_id=76 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9PYS1,uniprot:Q8C9D9 | |||
|association_with_transcript=-145bp_to_ENSMUST00000110746,uc007nmg.1_5end | |||
|cluster_id=chr12:50485973..50486015,+ | |||
|description=CAGE_peak_2_at_Foxg1_5end | |||
|id=chr12:50485973..50486015,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.93e-10!50;CL:0000221!7.34e-10!44;CL:0000133!7.34e-10!44;CL:0002319!3.02e-09!43;CL:0002609!8.90e-08!6;CL:0000393!1.03e-07!39;CL:0000211!1.03e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,1.39e-13,6;CL:0002453,8.75e-11,8;CL:0000221,3.12e-10,44;CL:0000133,3.12e-10,44;CL:0002319,2.67e-09,43;CL:0000333,2.08e-08,10;CL:0000095,2.08e-08,10;CL:0000243,2.08e-08,10;CL:0000123,2.08e-08,10;CL:0000125,2.08e-08,10;CL:0000030,2.08e-08,10;CL:0000339,2.08e-08,10;CL:0000128,3.65e-08,6;CL:0000126,3.65e-08,6;CL:0000127,3.65e-08,6;CL:0002321,4.46e-08,70;CL:0002608,2.03e-07,3;CL:0000393,8.69e-07,39;CL:0000211,8.69e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002791!1.83e-24!29;UBERON:0003528!1.83e-24!29;UBERON:0001893!1.83e-24!29;UBERON:0000956!1.74e-21!21;UBERON:0001869!1.74e-21!21;UBERON:0000203!1.74e-21!21;UBERON:0002780!3.08e-19!39;UBERON:0001890!3.08e-19!39;UBERON:0006240!3.08e-19!39;UBERON:0002020!3.60e-19!34;UBERON:0003080!1.88e-18!40;UBERON:0001017!1.71e-17!73;UBERON:0005743!1.71e-17!73;UBERON:0002619!3.06e-17!17;UBERON:0000955!4.43e-17!50;UBERON:0006238!4.43e-17!50;UBERON:0000073!1.37e-16!75;UBERON:0001016!1.37e-16!75;UBERON:0002616!3.02e-16!49;UBERON:0003056!2.25e-15!49;UBERON:0000033!4.74e-15!63;UBERON:0001049!1.04e-12!52;UBERON:0005068!1.04e-12!52;UBERON:0006241!1.04e-12!52;UBERON:0007135!1.04e-12!52;UBERON:0007811!2.84e-11!86;UBERON:0004121!2.11e-10!102;UBERON:0000924!2.11e-10!102;UBERON:0006601!2.11e-10!102;UBERON:0002021!4.13e-10!10;UBERON:0000411!4.13e-10!10;UBERON:0001950!4.13e-10!10;UBERON:0000153!4.18e-09!94;UBERON:0001954!1.44e-08!7;UBERON:0003022!1.44e-08!7;UBERON:0002421!1.44e-08!7;UBERON:0000349!1.44e-08!7;UBERON:0002600!1.44e-08!7;UBERON:0002346!1.70e-08!71;UBERON:0003075!1.70e-08!71;UBERON:0007284!1.70e-08!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,3.45e-40,21;UBERON:0001869,3.45e-40,21;UBERON:0000203,3.45e-40,21;UBERON:0003528,8.56e-37,29;UBERON:0002791,8.56e-37,29;UBERON:0001893,8.56e-37,29;UBERON:0002619,6.32e-32,17;UBERON:0002020,2.13e-30,34;UBERON:0002780,5.15e-28,39;UBERON:0001890,5.15e-28,39;UBERON:0006240,5.15e-28,39;UBERON:0003080,3.84e-27,40;UBERON:0000955,2.00e-26,47;UBERON:0006238,2.00e-26,47;UBERON:0002616,6.85e-25,46;UBERON:0001017,3.04e-24,73;UBERON:0001016,2.28e-23,75;UBERON:0001049,3.34e-21,52;UBERON:0005068,3.34e-21,52;UBERON:0006241,3.34e-21,52;UBERON:0007135,3.34e-21,52;UBERON:0003056,6.72e-21,49;UBERON:0000073,3.72e-20,54;UBERON:0002021,4.32e-18,10;UBERON:0000411,4.32e-18,10;UBERON:0001950,4.32e-18,10;UBERON:0004121,6.48e-18,95;UBERON:0000924,6.48e-18,95;UBERON:0006601,6.48e-18,95;UBERON:0002346,6.47e-16,64;UBERON:0003075,6.47e-16,64;UBERON:0007284,6.47e-16,64;UBERON:0001954,4.13e-15,7;UBERON:0003022,4.13e-15,7;UBERON:0002421,4.13e-15,7;UBERON:0000349,4.13e-15,7;UBERON:0002600,4.13e-15,7;UBERON:0010371,2.47e-14,73;UBERON:0010314,8.16e-11,92;UBERON:0000025,5.22e-09,114;UBERON:0004111,1.03e-08,122 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14742044938943,2.33166941804883,2.75320128242522,0,5.66865406589161,10.1055644057857,6.80504646759992,1.81982348112971,1.43752564364972,0,0,0,1.02903774414379,0,0,0,0,0,11.8595586224196,0.889294796111139,0,0,0,1.19840044207362,1.53687322128622,16.7977171939734,20.3858966880853,13.2504725651371,0,0,9.43179153955146,10.2554653989513,7.35375029288017,0,0.383062014255563,0.614426133024974,0.263772575460388,0.365950574409639,0.52091337055676,0,0.56276261003168,2.90316670775939,0,0,0,0,0,0,0,0,0,0,0,0,0.852151612890289,0.259786004602869,1.06001872353102,2.25349471642689,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,7.32000964509802,6.65968066198181,3.65031072403781,3.58001640262463,0.83115217823824,2.92034273521964,0,0,0,0,0.130120442962704,0.229902104433473,0,0,0.136072998302656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,7.99101804543684,9.67303356365274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0,0,0,0,1.63934945376675,0,0,0.390438744296638,0,1.19484398976276,0.891194696329576,0.283076530788832,0,1.16902343164525,1.97643888973262,4.81981974632711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.410843828659309,0.389762468933385,0,0,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0.194915761479505,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,2.30162618253588,5.15605962095457,2.40594455281163,2.05524755931193,6.0431511791176,4.72515750162264,3.60256962579376,3.17199686288943,3.62432218226274,0.415149390336707,1.59609949360412,0.512200817262403,0.972426868273176,1.88651846365184,0.735374033800057,0.44449345560323,0.412070114477788,0.64183841918363,0.505394423527595,0.50695859978048,1.13175804831646,0.280924522409647,0.512201219238954,0.459483751644906,0.476293691283074,0.231768651889711,0.38581844092741,0.824171801606613,0.441596760403192,0.342869252385415,0.532427418478012,0,0.581385666529314,0.658765662907314,0.423073039458382,0.914639864363863,0.526139422875686,0.679020569229309,1.68342681497322,0.949080144993393,0.492522411877817,0.409231043169689,0.464810523557898,0.192906610981141,1.24905288968973,0.467863216890817,0.859484216193193,0,0,0 | |||
|short_description=p2@Foxg1 | |||
}} |
Revision as of 02:02, 5 August 2015
Short description: | p2@Foxg1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Foxg1_5end |
Coexpression cluster: | MCL_coexpression_mm9:76 |
Association with transcript: | -145bp_to_ENSMUST00000110746, uc007nmg.1_5end |
EntrezGene: | 15228 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 1.39e-13 | 6 |
oligodendrocyte precursor cell | 8.75e-11 | 8 |
ectodermal cell | 3.12e-10 | 44 |
neurectodermal cell | 3.12e-10 | 44 |
neural cell | 2.67e-09 | 43 |
migratory neural crest cell | 2.08e-08 | 10 |
neuron associated cell | 2.08e-08 | 10 |
glial cell (sensu Vertebrata) | 2.08e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 2.08e-08 | 10 |
glial cell | 2.08e-08 | 10 |
glioblast | 2.08e-08 | 10 |
glioblast (sensu Vertebrata) | 2.08e-08 | 10 |
oligodendrocyte | 3.65e-08 | 6 |
macroglial cell | 3.65e-08 | 6 |
astrocyte | 3.65e-08 | 6 |
embryonic cell | 4.46e-08 | 70 |
hippocampal neuron | 2.03e-07 | 3 |
electrically responsive cell | 8.69e-07 | 39 |
electrically active cell | 8.69e-07 | 39 |