FFCP PHASE1:Mm9::chr15:12047568..12047601,+: Difference between revisions
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{{FFCP|EntrezGene=22763|HGNC=|MCL_coexpression_id=1107|UniProt=O88532|association_with_transcript=0bp_to_ENSMUST00000122941_5end|description=CAGE_peak_2_at_Zfr_5end|id=chr15:12047568..12047601,+|ontology_enrichment_celltype=CL:0000540!3.90e-10!33;CL:0000047!3.90e-10!33;CL:0000031!3.90e-10!33;CL:0000404!3.90e-10!33;CL:0000117!2.55e-09!23;CL:0000337!2.55e-09!23;CL:0000393!3.04e-08!39;CL:0000211!3.04e-08!39|ontology_enrichment_celltype_v019_2=CL:0000540,3.90e-10,33;CL:0000047,3.90e-10,33;CL:0000031,3.90e-10,33;CL:0000404,3.90e-10,33;CL:0000117,2.55e-09,23;CL:0000337,2.55e-09,23;CL:0000393,3.04e-08,39;CL:0000211,3.04e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.93e-16!75;UBERON:0001016!2.93e-16!75;UBERON:0001017!7.18e-16!73;UBERON:0005743!7.18e-16!73;UBERON:0000955!4.39e-15!50;UBERON:0006238!4.39e-15!50;UBERON:0001049!5.73e-15!52;UBERON:0005068!5.73e-15!52;UBERON:0006241!5.73e-15!52;UBERON:0007135!5.73e-15!52;UBERON:0004121!1.27e-14!102;UBERON:0000924!1.27e-14!102;UBERON:0006601!1.27e-14!102;UBERON:0002616!1.57e-14!49;UBERON:0002346!4.80e-14!71;UBERON:0003075!4.80e-14!71;UBERON:0007284!4.80e-14!71;UBERON:0002020!1.52e-13!34;UBERON:0000033!5.98e-13!63;UBERON:0003080!1.17e-12!40;UBERON:0002780!4.32e-12!39;UBERON:0001890!4.32e-12!39;UBERON:0006240!4.32e-12!39;UBERON:0002791!6.83e-12!29;UBERON:0003528!6.83e-12!29;UBERON:0001893!6.83e-12!29;UBERON:0003056!1.24e-11!49;UBERON:0000153!1.35e-09!94;UBERON:0000956!1.26e-08!21;UBERON:0001869!1.26e-08!21;UBERON:0000203!1.26e-08!21;UBERON:0000025!4.98e-08!114;UBERON:0004111!7.38e-08!122;UBERON:0002021!1.71e-07!10;UBERON:0000411!1.71e-07!10;UBERON:0001950!1.71e-07!10;UBERON:0007811!2.10e-07!86;UBERON:0000468!4.32e-07!333;UBERON:0002619!4.38e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.61e-16,54;UBERON:0001016,2.93e-16,75;UBERON:0001017,7.18e-16,73;UBERON:0001049,5.73e-15,52;UBERON:0005068,5.73e-15,52;UBERON:0006241,5.73e-15,52;UBERON:0007135,5.73e-15,52;UBERON:0004121,8.06e-15,95;UBERON:0000924,8.06e-15,95;UBERON:0006601,8.06e-15,95;UBERON:0002346,1.31e-14,64;UBERON:0003075,1.31e-14,64;UBERON:0007284,1.31e-14,64;UBERON:0010314,3.12e-14,92;UBERON:0010371,9.21e-14,73;UBERON:0002020,1.52e-13,34;UBERON:0000955,3.49e-13,47;UBERON:0006238,3.49e-13,47;UBERON:0003080,1.17e-12,40;UBERON:0002616,1.20e-12,46;UBERON:0002780,4.32e-12,39;UBERON:0001890,4.32e-12,39;UBERON:0006240,4.32e-12,39;UBERON:0003528,6.83e-12,29;UBERON:0002791,6.83e-12,29;UBERON:0001893,6.83e-12,29;UBERON:0003056,1.24e-11,49;UBERON:0000956,1.26e-08,21;UBERON:0001869,1.26e-08,21;UBERON:0000203,1.26e-08,21;UBERON:0000025,4.98e-08,114;UBERON:0004111,7.38e-08,122;UBERON:0002021,1.71e-07,10;UBERON:0000411,1.71e-07,10;UBERON:0001950,1.71e-07,10;UBERON:0002619,4.38e-07,17|phase1_expression=19.5381593467849,5.93258192986914,6.82498859084304,5.44435580352294,4.00716583957078,13.0945832091274,9.34450562382103,18.7228818990286,22.9485617107217,18.7251621057595,17.4642327590015,19.4644067948621,25.8513102196121,22.1173618120063,25.649451659806,22.2722794128809,27.9824751251259,22.555544823114,22.8981104121584,16.9755860719212,39.6301732103985,13.1064055585169,12.27639008953,6.87967418011649,6.42345986988076,6.89078356938024,6.03066794622705,8.40337807474967,5.89072600314759,5.29263272495855,7.53883736228036,6.35030673459631,11.6862309641068,0,7.79899373328441,9.64160943079256,9.39179038806898,17.996860121687,14.0640362014284,23.0350447348471,22.9410280332096,17.7591826089196,20.3914348273085,12.9673722514845,16.0175551326833,27.1649193199289,8.60630478782843,11.5553332881637,9.00713349211335,14.5822424305713,12.738764367908,14.3752564364972,20.6372605451016,17.4086914082723,26.8875039313971,21.6097926270195,27.2206767941819,27.8462929829819,32.168317276676,31.2104677770499,21.5502677192101,8.13226876965917,7.11435836888911,7.64914759689189,5.93319817540185,9.2362414942993,11.9840044207362,15.3687322128622,41.3721553110826,29.1612826796452,39.3307677727084,32.5642122220336,23.8538024227743,32.9500249888226,39.5841795305316,39.5264078242309,66.0695285996332,64.7374804091902,67.7404811660034,34.5542073853108,43.4566307111446,34.3802824567462,35.177057874174,49.5231096827878,55.3129656952053,54.5062883126285,54.2436103844582,47.3454592396263,29.3817630132754,31.362197444316,28.4067198927644,9.46466264679525,9.51959867190851,12.9528765993076,15.5946340187441,9.85659151614138,19.24088555805,26.2462696770209,21.3024523774352,28.9738451098479,22.5349471642689,29.5150898052931,15.2883143823987,0,16.6698101578635,15.7083116594561,17.6933555755174,20.2105467102736,73.2794210721496,33.9932498458449,22.3796071528315,18.5723941770406,26.0595511899346,20.4982791151567,33.7479589479473,28.274983049177,17.0564527736718,32.5348553069801,22.9998743506967,28.3091987407966,23.1883594383413,20.3647606316793,11.1835056730873,42.1604347696628,44.8215952580794,12.7728527604296,13.6589241936749,8.39863823390771,14.9942867946216,51.527979955259,36.1425476226715,32.041859788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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:22763 | |||
|HGNC= | |||
|MCL_coexpression_id=1107 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O88532 | |||
|association_with_transcript=0bp_to_ENSMUST00000122941_5end | |||
|cluster_id=chr15:12047568..12047601,+ | |||
|description=CAGE_peak_2_at_Zfr_5end | |||
|id=chr15:12047568..12047601,+ | |||
|ontology_enrichment_celltype=CL:0000540!3.90e-10!33;CL:0000047!3.90e-10!33;CL:0000031!3.90e-10!33;CL:0000404!3.90e-10!33;CL:0000117!2.55e-09!23;CL:0000337!2.55e-09!23;CL:0000393!3.04e-08!39;CL:0000211!3.04e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.90e-10,33;CL:0000047,3.90e-10,33;CL:0000031,3.90e-10,33;CL:0000404,3.90e-10,33;CL:0000117,2.55e-09,23;CL:0000337,2.55e-09,23;CL:0000393,3.04e-08,39;CL:0000211,3.04e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.93e-16!75;UBERON:0001016!2.93e-16!75;UBERON:0001017!7.18e-16!73;UBERON:0005743!7.18e-16!73;UBERON:0000955!4.39e-15!50;UBERON:0006238!4.39e-15!50;UBERON:0001049!5.73e-15!52;UBERON:0005068!5.73e-15!52;UBERON:0006241!5.73e-15!52;UBERON:0007135!5.73e-15!52;UBERON:0004121!1.27e-14!102;UBERON:0000924!1.27e-14!102;UBERON:0006601!1.27e-14!102;UBERON:0002616!1.57e-14!49;UBERON:0002346!4.80e-14!71;UBERON:0003075!4.80e-14!71;UBERON:0007284!4.80e-14!71;UBERON:0002020!1.52e-13!34;UBERON:0000033!5.98e-13!63;UBERON:0003080!1.17e-12!40;UBERON:0002780!4.32e-12!39;UBERON:0001890!4.32e-12!39;UBERON:0006240!4.32e-12!39;UBERON:0002791!6.83e-12!29;UBERON:0003528!6.83e-12!29;UBERON:0001893!6.83e-12!29;UBERON:0003056!1.24e-11!49;UBERON:0000153!1.35e-09!94;UBERON:0000956!1.26e-08!21;UBERON:0001869!1.26e-08!21;UBERON:0000203!1.26e-08!21;UBERON:0000025!4.98e-08!114;UBERON:0004111!7.38e-08!122;UBERON:0002021!1.71e-07!10;UBERON:0000411!1.71e-07!10;UBERON:0001950!1.71e-07!10;UBERON:0007811!2.10e-07!86;UBERON:0000468!4.32e-07!333;UBERON:0002619!4.38e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.61e-16,54;UBERON:0001016,2.93e-16,75;UBERON:0001017,7.18e-16,73;UBERON:0001049,5.73e-15,52;UBERON:0005068,5.73e-15,52;UBERON:0006241,5.73e-15,52;UBERON:0007135,5.73e-15,52;UBERON:0004121,8.06e-15,95;UBERON:0000924,8.06e-15,95;UBERON:0006601,8.06e-15,95;UBERON:0002346,1.31e-14,64;UBERON:0003075,1.31e-14,64;UBERON:0007284,1.31e-14,64;UBERON:0010314,3.12e-14,92;UBERON:0010371,9.21e-14,73;UBERON:0002020,1.52e-13,34;UBERON:0000955,3.49e-13,47;UBERON:0006238,3.49e-13,47;UBERON:0003080,1.17e-12,40;UBERON:0002616,1.20e-12,46;UBERON:0002780,4.32e-12,39;UBERON:0001890,4.32e-12,39;UBERON:0006240,4.32e-12,39;UBERON:0003528,6.83e-12,29;UBERON:0002791,6.83e-12,29;UBERON:0001893,6.83e-12,29;UBERON:0003056,1.24e-11,49;UBERON:0000956,1.26e-08,21;UBERON:0001869,1.26e-08,21;UBERON:0000203,1.26e-08,21;UBERON:0000025,4.98e-08,114;UBERON:0004111,7.38e-08,122;UBERON:0002021,1.71e-07,10;UBERON:0000411,1.71e-07,10;UBERON:0001950,1.71e-07,10;UBERON:0002619,4.38e-07,17 | |||
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| |||
|short_description=p2@Zfr | |||
}} |
Revision as of 02:17, 5 August 2015
Short description: | p2@Zfr |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Zfr_5end |
Coexpression cluster: | MCL_coexpression_mm9:1107 |
Association with transcript: | 0bp_to_ENSMUST00000122941_5end |
EntrezGene: | 22763 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.90e-10 | 33 |
neuronal stem cell | 3.90e-10 | 33 |
neuroblast | 3.90e-10 | 33 |
electrically signaling cell | 3.90e-10 | 33 |
CNS neuron (sensu Vertebrata) | 2.55e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.55e-09 | 23 |
electrically responsive cell | 3.04e-08 | 39 |
electrically active cell | 3.04e-08 | 39 |