FFCP PHASE1:Mm9::chr1:168931550..168931562,+: Difference between revisions
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{{FFCP|EntrezGene=226610|HGNC=|UniProt=Q8BQN5|association_with_transcript=0bp_to_ENSMUST00000156025_5end|description=CAGE_peak_6_at_Fam78b_5end|id=chr1:168931550..168931562,+|ontology_enrichment_celltype=CL:0000540!2.94e-13!33;CL:0000047!2.94e-13!33;CL:0000031!2.94e-13!33;CL:0000404!2.94e-13!33;CL:0000393!4.33e-12!39;CL:0000211!4.33e-12!39;CL:0000221!6.65e-11!44;CL:0000133!6.65e-11!44;CL:0002319!1.05e-10!43;CL:0000055!1.15e-09!50;CL:0000107!9.69e-09!9|ontology_enrichment_celltype_v019_2=CL:0000107,1.25e-20,9;CL:0000540,1.61e-14,33;CL:0000047,1.61e-14,33;CL:0000031,1.61e-14,33;CL:0000404,1.61e-14,33;CL:0000393,4.41e-12,39;CL:0000211,4.41e-12,39;CL:0002319,7.84e-11,43;CL:0000221,1.48e-10,44;CL:0000133,1.48e-10,44;CL:0000120,2.62e-08,3;CL:0002613,2.05e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!5.73e-11!75;UBERON:0001016!5.73e-11!75;UBERON:0001017!4.34e-10!73;UBERON:0005743!4.34e-10!73;UBERON:0000010!1.03e-09!11;UBERON:0004121!5.43e-09!102;UBERON:0000924!5.43e-09!102;UBERON:0006601!5.43e-09!102;UBERON:0002410!9.69e-09!9|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.25e-20,9;UBERON:0005631,5.10e-17,3;UBERON:0000478,5.10e-17,3;UBERON:0000158,5.10e-17,3;UBERON:0000013,7.36e-17,3;UBERON:0000010,8.03e-17,11;UBERON:0000011,7.18e-16,3;UBERON:0001987,5.57e-12,2;UBERON:0003124,5.57e-12,2;UBERON:0004340,5.57e-12,2;UBERON:0000369,1.43e-09,5;UBERON:0002435,1.43e-09,5;UBERON:0000204,1.43e-09,5;UBERON:0010082,1.43e-09,5;UBERON:0001017,1.35e-08,73;UBERON:0001016,2.56e-08,75;UBERON:0004121,1.85e-07,95;UBERON:0000924,1.85e-07,95;UBERON:0006601,1.85e-07,95|phase1_expression=0.320297694209588,0,0.454999239389536,0,0,0,0,0,0.281577444303333,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.367093504323363,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,2.64495489636016,3.1691570175309,0.338844532069132,0,0,0.988866362566974,0.7104801149461,0.599200221036809,0,0.207379224616955,0.270011876663381,0.420649922702764,0,0.883474163806454,0.734944795289724,0.575072826109418,0,0,0,0,1.05509030184155,0.731901148819277,1.04182674111352,0.279182999001381,0,0.15279824777681,0,0.427115042397309,0.931997229126503,0.227178579999552,0.529000920747499,0,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,1.97755974187499,0,0,0.323533699894818,0.220841518460394,0.969750506270444,0,0.585561594023094,0.41889341362691,0.255457055208591,0,0,0,0.299581278809645,0.457500602818626,1.50785222535437,0,0,0.20778804455956,0.162241263067758,0,0.497627882440372,0.252722758433675,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0.136072998302656,0.12811372028485,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0.324275238183423,0,0,0.134206418760372,0,0.514523061896422,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0.189709611372772,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0.169745085775188,0,0,0,0,0.315270288212382,0,0,0.163863314715738,0,0,1.50791283939272,0,0,0,0,0.234423373184406,0,0.252470927204373,0.315508219416257,0.780877488593277,0.646270193198397,1.43381278771531,1.33679204449436,1.41538265394416,2.02405350837447,1.46127928955656,3.55759000151871,0.321321316421807,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0.177340233642274,0,0.164549020602121,0,1.87737366450968,4.2366414172764,0,0,0.161464426695906,0,0.119372344003136,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0.288030006257865,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0.335769232728157,0.19318959403219,0.187682475451182,0,0,0,1.12950368523413,0,0,0.343706364687375,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0.486213434136588,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0.50695859978048,0.377252682772152,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0.294397840268795,0,0.532427418478012,0.238436189947321,0,0.0941093804153306,0.338458431566706,0,0.263069711437843,0.271608227691724,1.12228454331548,0.355905054372522,0.394017929502254,0,0.154936841185966,0.192906610981141,0,0,0.429742108096597,0.382576664137687,0,0.231867835620421|short_description=p6@Fam78b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:226610 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BQN5 | |||
|association_with_transcript=0bp_to_ENSMUST00000156025_5end | |||
|cluster_id=chr1:168931550..168931562,+ | |||
|description=CAGE_peak_6_at_Fam78b_5end | |||
|id=chr1:168931550..168931562,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.94e-13!33;CL:0000047!2.94e-13!33;CL:0000031!2.94e-13!33;CL:0000404!2.94e-13!33;CL:0000393!4.33e-12!39;CL:0000211!4.33e-12!39;CL:0000221!6.65e-11!44;CL:0000133!6.65e-11!44;CL:0002319!1.05e-10!43;CL:0000055!1.15e-09!50;CL:0000107!9.69e-09!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.25e-20,9;CL:0000540,1.61e-14,33;CL:0000047,1.61e-14,33;CL:0000031,1.61e-14,33;CL:0000404,1.61e-14,33;CL:0000393,4.41e-12,39;CL:0000211,4.41e-12,39;CL:0002319,7.84e-11,43;CL:0000221,1.48e-10,44;CL:0000133,1.48e-10,44;CL:0000120,2.62e-08,3;CL:0002613,2.05e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.73e-11!75;UBERON:0001016!5.73e-11!75;UBERON:0001017!4.34e-10!73;UBERON:0005743!4.34e-10!73;UBERON:0000010!1.03e-09!11;UBERON:0004121!5.43e-09!102;UBERON:0000924!5.43e-09!102;UBERON:0006601!5.43e-09!102;UBERON:0002410!9.69e-09!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.25e-20,9;UBERON:0005631,5.10e-17,3;UBERON:0000478,5.10e-17,3;UBERON:0000158,5.10e-17,3;UBERON:0000013,7.36e-17,3;UBERON:0000010,8.03e-17,11;UBERON:0000011,7.18e-16,3;UBERON:0001987,5.57e-12,2;UBERON:0003124,5.57e-12,2;UBERON:0004340,5.57e-12,2;UBERON:0000369,1.43e-09,5;UBERON:0002435,1.43e-09,5;UBERON:0000204,1.43e-09,5;UBERON:0010082,1.43e-09,5;UBERON:0001017,1.35e-08,73;UBERON:0001016,2.56e-08,75;UBERON:0004121,1.85e-07,95;UBERON:0000924,1.85e-07,95;UBERON:0006601,1.85e-07,95 | |||
|phase1_expression=0.320297694209588,0,0.454999239389536,0,0,0,0,0,0.281577444303333,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.367093504323363,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,2.64495489636016,3.1691570175309,0.338844532069132,0,0,0.988866362566974,0.7104801149461,0.599200221036809,0,0.207379224616955,0.270011876663381,0.420649922702764,0,0.883474163806454,0.734944795289724,0.575072826109418,0,0,0,0,1.05509030184155,0.731901148819277,1.04182674111352,0.279182999001381,0,0.15279824777681,0,0.427115042397309,0.931997229126503,0.227178579999552,0.529000920747499,0,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,1.97755974187499,0,0,0.323533699894818,0.220841518460394,0.969750506270444,0,0.585561594023094,0.41889341362691,0.255457055208591,0,0,0,0.299581278809645,0.457500602818626,1.50785222535437,0,0,0.20778804455956,0.162241263067758,0,0.497627882440372,0.252722758433675,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0.136072998302656,0.12811372028485,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0.324275238183423,0,0,0.134206418760372,0,0.514523061896422,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0.189709611372772,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0.169745085775188,0,0,0,0,0.315270288212382,0,0,0.163863314715738,0,0,1.50791283939272,0,0,0,0,0.234423373184406,0,0.252470927204373,0.315508219416257,0.780877488593277,0.646270193198397,1.43381278771531,1.33679204449436,1.41538265394416,2.02405350837447,1.46127928955656,3.55759000151871,0.321321316421807,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0.177340233642274,0,0.164549020602121,0,1.87737366450968,4.2366414172764,0,0,0.161464426695906,0,0.119372344003136,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0.288030006257865,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0.335769232728157,0.19318959403219,0.187682475451182,0,0,0,1.12950368523413,0,0,0.343706364687375,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0.486213434136588,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0.50695859978048,0.377252682772152,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0.294397840268795,0,0.532427418478012,0.238436189947321,0,0.0941093804153306,0.338458431566706,0,0.263069711437843,0.271608227691724,1.12228454331548,0.355905054372522,0.394017929502254,0,0.154936841185966,0.192906610981141,0,0,0.429742108096597,0.382576664137687,0,0.231867835620421 | |||
|short_description=p6@Fam78b | |||
}} |
Revision as of 04:43, 5 August 2015
Short description: | p6@Fam78b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Fam78b_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000156025_5end |
EntrezGene: | 226610 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.25e-20 | 9 |
neuron | 1.61e-14 | 33 |
neuronal stem cell | 1.61e-14 | 33 |
neuroblast | 1.61e-14 | 33 |
electrically signaling cell | 1.61e-14 | 33 |
electrically responsive cell | 4.41e-12 | 39 |
electrically active cell | 4.41e-12 | 39 |
neural cell | 7.84e-11 | 43 |
ectodermal cell | 1.48e-10 | 44 |
neurectodermal cell | 1.48e-10 | 44 |
granule cell | 2.62e-08 | 3 |
striatum neuron | 2.05e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 1.25e-20 | 9 |
extraembryonic membrane | 5.10e-17 | 3 |
extraembryonic structure | 5.10e-17 | 3 |
membranous layer | 5.10e-17 | 3 |
sympathetic nervous system | 7.36e-17 | 3 |
peripheral nervous system | 8.03e-17 | 11 |
parasympathetic nervous system | 7.18e-16 | 3 |
placenta | 5.57e-12 | 2 |
chorion | 5.57e-12 | 2 |
allantois | 5.57e-12 | 2 |
corpus striatum | 1.43e-09 | 5 |
striatum | 1.43e-09 | 5 |
ventral part of telencephalon | 1.43e-09 | 5 |
future corpus striatum | 1.43e-09 | 5 |
central nervous system | 1.35e-08 | 73 |
nervous system | 2.56e-08 | 75 |
ectoderm-derived structure | 1.85e-07 | 95 |
ectoderm | 1.85e-07 | 95 |
presumptive ectoderm | 1.85e-07 | 95 |