FFCP PHASE1:Mm9::chr4:151822841..151822859,-: Difference between revisions
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{{FFCP|EntrezGene=16498|HGNC=|MCL_coexpression_id=36|UniProt=E0CXY2|association_with_transcript=0bp_to_ENSMUST00000159435,ENSMUST00000162518_5end|description=CAGE_peak_3_at_Kcnab2_5end|id=chr4:151822841..151822859,-|ontology_enrichment_celltype=CL:0000988!3.76e-11!32;CL:0002032!3.76e-11!32;CL:0000037!3.76e-11!32;CL:0000566!3.76e-11!32;CL:0000837!3.76e-11!32;CL:0000738!3.76e-09!17;CL:0002087!3.76e-09!17;CL:0002031!8.00e-09!25;CL:0000838!4.96e-08!12;CL:0000084!1.25e-07!11;CL:0000827!1.25e-07!11;CL:0000542!2.96e-07!13;CL:0000051!2.96e-07!13|ontology_enrichment_celltype_v019_2=CL:0000988,2.89e-14,32;CL:0002032,2.89e-14,32;CL:0000037,2.89e-14,32;CL:0000837,2.89e-14,32;CL:0002031,1.49e-11,25;CL:0000738,1.05e-10,17;CL:0002087,1.05e-10,17;CL:0000838,1.61e-09,12;CL:0002320,1.67e-09,46;CL:0000134,1.67e-09,46;CL:0000084,4.97e-09,11;CL:0000827,4.97e-09,11;CL:0000542,2.22e-08,13;CL:0000051,2.22e-08,13;CL:0000791,7.72e-08,9;CL:0000789,7.72e-08,9;CL:0002420,7.72e-08,9;CL:0002419,7.72e-08,9;CL:0000790,7.72e-08,9;CL:0000219,1.86e-07,54;CL:0000049,2.68e-07,19;CL:0000624,4.28e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.30e-20!48;UBERON:0002390!2.02e-19!45;UBERON:0003061!2.02e-19!45;UBERON:0002405!6.01e-17!70;UBERON:0004177!2.43e-11!29;UBERON:0003081!1.46e-10!88;UBERON:0003408!2.91e-09!24;UBERON:0002370!5.51e-09!23;UBERON:0000974!5.51e-09!23;UBERON:0004807!5.51e-09!23;UBERON:0005058!5.51e-09!23;UBERON:0003351!5.51e-09!23;UBERON:0009113!5.51e-09!23;UBERON:0003295!5.51e-09!23;UBERON:0009722!5.51e-09!23;UBERON:0005562!5.51e-09!23;UBERON:0007690!5.51e-09!23;UBERON:0002371!6.21e-09!16;UBERON:0005057!1.04e-08!51;UBERON:0006562!1.79e-08!24;UBERON:0001557!1.79e-08!24;UBERON:0001042!1.79e-08!24;UBERON:0008814!1.79e-08!24;UBERON:0009145!1.79e-08!24;UBERON:0000926!1.87e-08!193;UBERON:0004120!1.87e-08!193;UBERON:0006603!1.87e-08!193;UBERON:0001474!1.93e-08!22;UBERON:0004765!1.93e-08!22;UBERON:0001434!1.93e-08!22;UBERON:0001004!9.75e-08!42;UBERON:0000065!1.82e-07!41;UBERON:0002204!3.74e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.07e-26,48;UBERON:0002405,6.07e-26,48;UBERON:0002390,8.75e-25,45;UBERON:0003061,8.75e-25,45;UBERON:0004177,1.00e-14,29;UBERON:0005057,1.00e-14,29;UBERON:0003408,3.82e-12,24;UBERON:0002370,8.29e-12,23;UBERON:0000974,8.29e-12,23;UBERON:0004807,8.29e-12,23;UBERON:0005058,8.29e-12,23;UBERON:0003351,8.29e-12,23;UBERON:0009113,8.29e-12,23;UBERON:0003295,8.29e-12,23;UBERON:0009722,8.29e-12,23;UBERON:0005562,8.29e-12,23;UBERON:0007690,8.29e-12,23;UBERON:0003081,2.88e-11,87;UBERON:0000077,4.52e-11,35;UBERON:0006562,6.21e-11,24;UBERON:0001557,6.21e-11,24;UBERON:0001042,6.21e-11,24;UBERON:0008814,6.21e-11,24;UBERON:0009145,6.21e-11,24;UBERON:0002371,1.25e-10,16;UBERON:0001474,2.34e-10,22;UBERON:0004765,2.34e-10,22;UBERON:0001434,2.34e-10,22;UBERON:0002204,7.70e-10,32;UBERON:0002384,1.67e-09,46;UBERON:0001004,5.97e-09,42;UBERON:0000072,9.65e-09,27;UBERON:0000065,1.27e-08,41;UBERON:0001041,3.07e-08,80;UBERON:0000926,6.58e-08,120;UBERON:0004120,6.58e-08,120;UBERON:0006603,6.58e-08,120|phase1_expression=0.160148847104794,0,0,0,0,0,0,48.8086162609158,10.8407316056783,13.8098070529976,25.3402592973747,36.6154209788594,47.5938029208752,62.9426897416781,5.99597571268193,8.90891176515234,2.09868563438444,19.7163853348899,20.7042794744666,10.6097412949508,0.935476191661768,25.6170654098284,18.2839852397255,1.91990907352088,1.83527424853736,0,0,0,0,0,0.665191531965914,0,0,0,0,0,0,78.6839465785387,41.4107732597614,59.1581830690392,48.8232135065742,65.5723665560108,57.7757320107073,0,0,0,3.12956537739216,0,0,0,0.279972843250725,0,13.0870432725034,45.6978149467147,32.601098516819,0,1.43266719969378,1.03134418455488,0,0,0,0,0,49.0445345918362,55.3765163037506,52.5755285060114,13.1824048628098,6.53171119046643,0.103689612308478,0,0,0,0.441737081903227,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0.186399445825301,1.28734528666413,0.831287161174641,0,0,0,0,0,0,4.21333260395256,0,0.259786004602869,0,0,0,0,0,0,0,0,1.25602267690966,41.9479371508418,2.22663208597237,0.867426633830679,0.913396434936424,0.461230994512117,0.904335843315735,0.940709657085638,1.25666591329675,0,2.31358971071859,18.5768215909474,2.26473589926373,6.40440403535141,8.727754556434,1.86391761218122,0.292780797011547,0.209446706813455,3.0654846625031,16.8939325553348,16.197373736822,19.9500256504712,0,0,0,0.173824320192276,0,0.20778804455956,0.162241263067758,0.916554274652847,7.58882520721567,0,0.841767423545896,0,0.229902104433473,0.180062129805349,0.30140963567143,0.0680364991513279,0.2562274405697,0.187403449119458,0.258703370739016,0.431135985865684,0.189106080167819,0.175951124163949,0.219195732427575,0.278047249225598,1.0447564995665,0.823128545631774,0.796137067273973,16.8531164955176,27.7935739683892,21.8805894534606,0,0.469052119962192,0.180062061461015,0.473489471170421,0,0.308534225774757,0,0.804820204198858,0.700592054203017,0.329119699826961,0.32833492815819,0.729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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:16498 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E0CXY2 | |||
|association_with_transcript=0bp_to_ENSMUST00000159435,ENSMUST00000162518_5end | |||
|cluster_id=chr4:151822841..151822859,- | |||
|description=CAGE_peak_3_at_Kcnab2_5end | |||
|id=chr4:151822841..151822859,- | |||
|ontology_enrichment_celltype=CL:0000988!3.76e-11!32;CL:0002032!3.76e-11!32;CL:0000037!3.76e-11!32;CL:0000566!3.76e-11!32;CL:0000837!3.76e-11!32;CL:0000738!3.76e-09!17;CL:0002087!3.76e-09!17;CL:0002031!8.00e-09!25;CL:0000838!4.96e-08!12;CL:0000084!1.25e-07!11;CL:0000827!1.25e-07!11;CL:0000542!2.96e-07!13;CL:0000051!2.96e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.89e-14,32;CL:0002032,2.89e-14,32;CL:0000037,2.89e-14,32;CL:0000837,2.89e-14,32;CL:0002031,1.49e-11,25;CL:0000738,1.05e-10,17;CL:0002087,1.05e-10,17;CL:0000838,1.61e-09,12;CL:0002320,1.67e-09,46;CL:0000134,1.67e-09,46;CL:0000084,4.97e-09,11;CL:0000827,4.97e-09,11;CL:0000542,2.22e-08,13;CL:0000051,2.22e-08,13;CL:0000791,7.72e-08,9;CL:0000789,7.72e-08,9;CL:0002420,7.72e-08,9;CL:0002419,7.72e-08,9;CL:0000790,7.72e-08,9;CL:0000219,1.86e-07,54;CL:0000049,2.68e-07,19;CL:0000624,4.28e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.30e-20!48;UBERON:0002390!2.02e-19!45;UBERON:0003061!2.02e-19!45;UBERON:0002405!6.01e-17!70;UBERON:0004177!2.43e-11!29;UBERON:0003081!1.46e-10!88;UBERON:0003408!2.91e-09!24;UBERON:0002370!5.51e-09!23;UBERON:0000974!5.51e-09!23;UBERON:0004807!5.51e-09!23;UBERON:0005058!5.51e-09!23;UBERON:0003351!5.51e-09!23;UBERON:0009113!5.51e-09!23;UBERON:0003295!5.51e-09!23;UBERON:0009722!5.51e-09!23;UBERON:0005562!5.51e-09!23;UBERON:0007690!5.51e-09!23;UBERON:0002371!6.21e-09!16;UBERON:0005057!1.04e-08!51;UBERON:0006562!1.79e-08!24;UBERON:0001557!1.79e-08!24;UBERON:0001042!1.79e-08!24;UBERON:0008814!1.79e-08!24;UBERON:0009145!1.79e-08!24;UBERON:0000926!1.87e-08!193;UBERON:0004120!1.87e-08!193;UBERON:0006603!1.87e-08!193;UBERON:0001474!1.93e-08!22;UBERON:0004765!1.93e-08!22;UBERON:0001434!1.93e-08!22;UBERON:0001004!9.75e-08!42;UBERON:0000065!1.82e-07!41;UBERON:0002204!3.74e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.07e-26,48;UBERON:0002405,6.07e-26,48;UBERON:0002390,8.75e-25,45;UBERON:0003061,8.75e-25,45;UBERON:0004177,1.00e-14,29;UBERON:0005057,1.00e-14,29;UBERON:0003408,3.82e-12,24;UBERON:0002370,8.29e-12,23;UBERON:0000974,8.29e-12,23;UBERON:0004807,8.29e-12,23;UBERON:0005058,8.29e-12,23;UBERON:0003351,8.29e-12,23;UBERON:0009113,8.29e-12,23;UBERON:0003295,8.29e-12,23;UBERON:0009722,8.29e-12,23;UBERON:0005562,8.29e-12,23;UBERON:0007690,8.29e-12,23;UBERON:0003081,2.88e-11,87;UBERON:0000077,4.52e-11,35;UBERON:0006562,6.21e-11,24;UBERON:0001557,6.21e-11,24;UBERON:0001042,6.21e-11,24;UBERON:0008814,6.21e-11,24;UBERON:0009145,6.21e-11,24;UBERON:0002371,1.25e-10,16;UBERON:0001474,2.34e-10,22;UBERON:0004765,2.34e-10,22;UBERON:0001434,2.34e-10,22;UBERON:0002204,7.70e-10,32;UBERON:0002384,1.67e-09,46;UBERON:0001004,5.97e-09,42;UBERON:0000072,9.65e-09,27;UBERON:0000065,1.27e-08,41;UBERON:0001041,3.07e-08,80;UBERON:0000926,6.58e-08,120;UBERON:0004120,6.58e-08,120;UBERON:0006603,6.58e-08,120 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,48.8086162609158,10.8407316056783,13.8098070529976,25.3402592973747,36.6154209788594,47.5938029208752,62.9426897416781,5.99597571268193,8.90891176515234,2.09868563438444,19.7163853348899,20.7042794744666,10.6097412949508,0.935476191661768,25.6170654098284,18.2839852397255,1.91990907352088,1.83527424853736,0,0,0,0,0,0.665191531965914,0,0,0,0,0,0,78.6839465785387,41.4107732597614,59.1581830690392,48.8232135065742,65.5723665560108,57.7757320107073,0,0,0,3.12956537739216,0,0,0,0.279972843250725,0,13.0870432725034,45.6978149467147,32.601098516819,0,1.43266719969378,1.03134418455488,0,0,0,0,0,49.0445345918362,55.3765163037506,52.5755285060114,13.1824048628098,6.53171119046643,0.103689612308478,0,0,0,0.441737081903227,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0.186399445825301,1.28734528666413,0.831287161174641,0,0,0,0,0,0,4.21333260395256,0,0.259786004602869,0,0,0,0,0,0,0,0,1.25602267690966,41.9479371508418,2.22663208597237,0.867426633830679,0.913396434936424,0.461230994512117,0.904335843315735,0.940709657085638,1.25666591329675,0,2.31358971071859,18.5768215909474,2.26473589926373,6.40440403535141,8.727754556434,1.86391761218122,0.292780797011547,0.209446706813455,3.0654846625031,16.8939325553348,16.197373736822,19.9500256504712,0,0,0,0.173824320192276,0,0.20778804455956,0.162241263067758,0.916554274652847,7.58882520721567,0,0.841767423545896,0,0.229902104433473,0.180062129805349,0.30140963567143,0.0680364991513279,0.2562274405697,0.187403449119458,0.258703370739016,0.431135985865684,0.189106080167819,0.175951124163949,0.219195732427575,0.278047249225598,1.0447564995665,0.823128545631774,0.796137067273973,16.8531164955176,27.7935739683892,21.8805894534606,0,0.469052119962192,0.180062061461015,0.473489471170421,0,0.308534225774757,0,0.804820204198858,0.700592054203017,0.329119699826961,0.32833492815819,0.729619285912702,1.02339991197733,3.73235195994786,0.536825675041487,0,0,0.330418782983798,1.32225283331772,0.213288250535234,0.232236671860439,0.38660238396628,0.605050573870028,0.444756087689741,0.380451252225118,0.949058123089023,0.494096864172033,0,0.795825888164603,0.779856348476481,1.79763881730844,0.648414149624083,0.398282546508734,0.189667900953082,0.342745537829186,0,0.203651327845314,0,0.210407459670956,0.189709611372772,0.738050739898011,0,0.123397163921801,0.296452627087149,2.33583148002532,2.35870794135844,3.59779379815766,5.68008339887808,4.3411888755435,5.34714288740982,6.61701116136864,2.91843408195064,1.92192989231657,2.87536413054709,2.97712758134803,1.5601883655728,1.01031551178845,0.538192240565737,0,7.20537441649758,0.189491411770485,0.488894929326078,0.509235257325564,0.938760993154008,1.34005005953453,0.952174563544055,1.56106918286239,2.83743259391144,2.21464689648775,3.6674596791222,3.93271955317771,4.48980952851328,2.60368305446721,24.1266054302836,42.4246433378593,1.47529281905711,3.31124095565679,0.160550589987792,0,0,1.76729649043061,0,0,0,0,0,0,0,0,0,0.321321316421807,1.41940085208269,0.178065603667255,1.46598263418218,1.64970122972535,0,0,0.604647113929502,0.565815239267694,0.590603785761546,1.22974059177571,1.03371317267288,2.54473610634254,2.13898427030833,1.8962205476149,0,0,0,0.18006109403131,0.258717367565509,0.214337035031592,0.532020700926821,0.535106452806212,0.164549020602121,0,2.11204537257339,0.42366414172764,0.661585194164886,2.80306630000516,2.42196640043858,0.844380948994182,1.07435109602823,1.31312719796049,0.582961673259701,0,11.2774781326583,6.81076664278634,10.1856990053341,8.2882121082064,10.1153728513559,8.46479240864134,19.7174978792872,24.7714070612875,18.2423965421839,0,0.632671987162271,0.203319467126849,0.216010681643603,0.209088296014469,0.655087691238533,0.809186078308924,1.07449492442937,0,0.388844919875379,3.10669656543463,0.56369293868419,0.149516546043979,0.165458490457098,1.16670713006429,0.258319646955462,0,0.821500670520278,0.5208175393758,0.524296722128554,0.483168241652012,0.288030006257865,27.1769563740233,20.2725215290164,21.0557462187896,27.4132936483147,26.1378975674523,28.6101150885021,30.770035077112,29.3902159077409,31.7034652837184,23.31928283643,27.6263747274943,29.2373642219257,23.5719012018807,27.3491951104871,0.226730383615211,0,0,0,0,3.37828455812128,1.64836461840539,0.643105137237198,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0.103787347584177,0.798049746802062,1.19513524027894,1.70174701947806,0.838452650511929,1.47074806760011,2.44471400581777,1.03017528619447,0.320919209591815,2.27427490587418,0.760437899670719,0.943131706930381,1.31098110457835,1.28050304809739,1.49332219284595,1.42888107384922,1.62238056322798,1.35036454324594,1.23625770240992,2.50238164228475,1.02860775715625,2.12970967391205,0.953744759789284,1.74415699958794,1.50575008664529,1.94613598150856,1.46342378298218,1.05227884575137,0.679020569229309,2.24456908663095,1.18635018124174,1.28055827088233,0.409231043169689,0.77468420592983,1.92906610981141,2.24829520144151,1.16965804222704,2.36358159453128,2.2954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| |||
|short_description=p3@Kcnab2 | |||
}} |
Revision as of 06:21, 5 August 2015
Short description: | p3@Kcnab2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Kcnab2_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 0bp_to_ENSMUST00000159435, ENSMUST00000162518_5end |
EntrezGene: | 16498 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.89e-14 | 32 |
hematopoietic oligopotent progenitor cell | 2.89e-14 | 32 |
hematopoietic stem cell | 2.89e-14 | 32 |
hematopoietic multipotent progenitor cell | 2.89e-14 | 32 |
hematopoietic lineage restricted progenitor cell | 1.49e-11 | 25 |
leukocyte | 1.05e-10 | 17 |
nongranular leukocyte | 1.05e-10 | 17 |
lymphoid lineage restricted progenitor cell | 1.61e-09 | 12 |
connective tissue cell | 1.67e-09 | 46 |
mesenchymal cell | 1.67e-09 | 46 |
T cell | 4.97e-09 | 11 |
pro-T cell | 4.97e-09 | 11 |
lymphocyte | 2.22e-08 | 13 |
common lymphoid progenitor | 2.22e-08 | 13 |
mature alpha-beta T cell | 7.72e-08 | 9 |
alpha-beta T cell | 7.72e-08 | 9 |
immature T cell | 7.72e-08 | 9 |
mature T cell | 7.72e-08 | 9 |
immature alpha-beta T cell | 7.72e-08 | 9 |
motile cell | 1.86e-07 | 54 |
common myeloid progenitor | 2.68e-07 | 19 |
CD4-positive, alpha-beta T cell | 4.28e-07 | 8 |