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FFCP PHASE1:Mm9::chr4:155367252..155367296,+: Difference between revisions

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{{FFCP|EntrezGene=20318|HGNC=|UniProt=Q61112|association_with_transcript=0bp_to_ENSMUST00000097734_5end|description=CAGE_peak_2_at_Sdf4_5end|id=chr4:155367252..155367296,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!2.82e-13!50;UBERON:0006238!2.82e-13!50;UBERON:0004121!4.29e-13!102;UBERON:0000924!4.29e-13!102;UBERON:0006601!4.29e-13!102;UBERON:0002616!5.38e-13!49;UBERON:0001049!2.21e-12!52;UBERON:0005068!2.21e-12!52;UBERON:0006241!2.21e-12!52;UBERON:0007135!2.21e-12!52;UBERON:0000073!4.78e-12!75;UBERON:0001016!4.78e-12!75;UBERON:0001017!6.25e-12!73;UBERON:0005743!6.25e-12!73;UBERON:0000033!7.02e-11!63;UBERON:0002346!1.72e-10!71;UBERON:0003075!1.72e-10!71;UBERON:0007284!1.72e-10!71;UBERON:0007811!5.24e-10!86;UBERON:0000475!2.48e-09!200;UBERON:0000153!4.67e-09!94;UBERON:0003080!6.41e-09!40;UBERON:0002780!1.63e-08!39;UBERON:0001890!1.63e-08!39;UBERON:0006240!1.63e-08!39;UBERON:0004111!3.33e-08!122;UBERON:0002020!9.91e-08!34;UBERON:0000025!1.01e-07!114;UBERON:0000477!1.26e-07!154;UBERON:0003056!1.31e-07!49;UBERON:0002791!2.67e-07!29;UBERON:0003528!2.67e-07!29;UBERON:0001893!2.67e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.76e-13,54;UBERON:0001049,2.21e-12,52;UBERON:0005068,2.21e-12,52;UBERON:0006241,2.21e-12,52;UBERON:0007135,2.21e-12,52;UBERON:0004121,2.61e-12,95;UBERON:0000924,2.61e-12,95;UBERON:0006601,2.61e-12,95;UBERON:0001016,4.78e-12,75;UBERON:0001017,6.25e-12,73;UBERON:0000955,1.26e-11,47;UBERON:0006238,1.26e-11,47;UBERON:0010371,2.07e-11,73;UBERON:0002616,2.36e-11,46;UBERON:0002346,7.17e-10,64;UBERON:0003075,7.17e-10,64;UBERON:0007284,7.17e-10,64;UBERON:0003080,6.41e-09,40;UBERON:0010314,1.12e-08,92;UBERON:0002780,1.63e-08,39;UBERON:0001890,1.63e-08,39;UBERON:0006240,1.63e-08,39;UBERON:0004111,3.33e-08,122;UBERON:0002020,9.91e-08,34;UBERON:0000025,1.01e-07,114;UBERON:0003056,1.31e-07,49;UBERON:0003528,2.67e-07,29;UBERON:0002791,2.67e-07,29;UBERON:0001893,2.67e-07,29|phase1_expression=22.5809874417759,11.5161884520989,9.09998478779072,7.25914107136392,10.5188103288733,8.89760141133016,6.77476657727024,51.2619594063058,37.0274339258884,41.4294211589928,38.5240428507386,33.7436232550273,45.7105948916319,51.2283558175325,14.3237197580735,18.627724599864,23.785103856357,24.6060488979425,24.8177124826387,25.8877687596798,24.322380983206,18.9645716793691,21.4183827093927,15.1992801653736,15.5998311125676,10.9104073181854,6.8921919385452,9.9116767035509,11.9714754257516,13.3575968772763,10.4213340007993,8.25539875497521,9.22597181376855,0,10.9763615505484,10.3065480122265,9.80012910059372,28.4601508901097,31.253413780952,30.3643771504803,27.6468799374577,37.5675016727145,33.5002143591496,31.7259981298455,27.777279154147,24.9623582939887,45.3786979721863,23.9827672018491,49.4293911152562,50.9406335574622,23.937678097937,21.5628846547457,19.9661301208706,39.8949178106239,30.9206295211067,32.1574295044934,37.2493471920384,50.5358650431893,17.1968991730658,14.8117474196169,15.2119536841483,30.1571633541528,24.9002542911119,29.2467408116455,29.6659908770092,34.1030455174128,25.4660093940644,26.1268447618657,22.0858874217057,23.7610451463776,21.6634710191923,25.7085885963423,32.4676755198872,17.6386750869534,19.1690942036473,14.7075005857603,42.9451935897616,41.7537595538564,37.7872071810359,17.672762555846,15.2784364816024,24.4829284161677,44.3900968412196,36.5795696520592,33.004421519791,22.3917724959987,28.6167078406197,17.1487490159277,23.9294770932862,21.4623230703271,39.7114349521299,18.9293252935905,16.9992833426938,31.3027851149934,15.5946340187441,10.3046184032387,16.0106638950197,18.4064748384302,27.5373164879041,22.2603931941514,24.5067550411424,28.2318250311499,30.5766287647975,14.2213340630666,15.3708639117962,14.4415123320806,16.1767822404731,17.3559497172971,18.6435276225964,28.2040064223167,18.0424739836781,21.9215144384742,20.0635482612771,26.2257394561563,25.0463946199051,25.5103180399241,36.0904652892186,14.4599356919912,12.3845477272982,24.103260642164,14.575540218386,14.5462575940567,9.31958806090611,28.6925181071316,34.977600037847,11.240110429178,23.1243190296426,16.197373736822,22.2372897377863,34.601637702514,36.6000482254901,17.7172636479139,36.5031072403781,40.6587577155226,34.0772393077679,38.6134206101263,32.1812389766999,26.3742777693397,30.8321765289083,19.5710925974421,12.2313216384941,13.3343220571414,19.6267721487831,20.7972648613287,20.547022743701,20.7544226861457,23.4254311399322,26.6464471861186,9.48499168904506,13.0483195315795,18.1229657888867,19.5084201860542,25.0242524303038,19.5021213252413,26.7516777330327,20.6995637491233,13.3420505589515,11.5806558201622,19.3231179589003,12.4275463521301,12.4298811789981,13.6847166710371,12.0739815148457,13.3799677588235,18.6663206593728,14.4171045745253,17.1694976895756,16.9309746432396,22.5446994381468,23.9684497555479,24.0774364351192,19.2983983401439,21.515911298523,22.8150911892632,42.057989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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:20318
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q61112
|association_with_transcript=0bp_to_ENSMUST00000097734_5end
|cluster_id=chr4:155367252..155367296,+
|description=CAGE_peak_2_at_Sdf4_5end
|id=chr4:155367252..155367296,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000955!2.82e-13!50;UBERON:0006238!2.82e-13!50;UBERON:0004121!4.29e-13!102;UBERON:0000924!4.29e-13!102;UBERON:0006601!4.29e-13!102;UBERON:0002616!5.38e-13!49;UBERON:0001049!2.21e-12!52;UBERON:0005068!2.21e-12!52;UBERON:0006241!2.21e-12!52;UBERON:0007135!2.21e-12!52;UBERON:0000073!4.78e-12!75;UBERON:0001016!4.78e-12!75;UBERON:0001017!6.25e-12!73;UBERON:0005743!6.25e-12!73;UBERON:0000033!7.02e-11!63;UBERON:0002346!1.72e-10!71;UBERON:0003075!1.72e-10!71;UBERON:0007284!1.72e-10!71;UBERON:0007811!5.24e-10!86;UBERON:0000475!2.48e-09!200;UBERON:0000153!4.67e-09!94;UBERON:0003080!6.41e-09!40;UBERON:0002780!1.63e-08!39;UBERON:0001890!1.63e-08!39;UBERON:0006240!1.63e-08!39;UBERON:0004111!3.33e-08!122;UBERON:0002020!9.91e-08!34;UBERON:0000025!1.01e-07!114;UBERON:0000477!1.26e-07!154;UBERON:0003056!1.31e-07!49;UBERON:0002791!2.67e-07!29;UBERON:0003528!2.67e-07!29;UBERON:0001893!2.67e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.76e-13,54;UBERON:0001049,2.21e-12,52;UBERON:0005068,2.21e-12,52;UBERON:0006241,2.21e-12,52;UBERON:0007135,2.21e-12,52;UBERON:0004121,2.61e-12,95;UBERON:0000924,2.61e-12,95;UBERON:0006601,2.61e-12,95;UBERON:0001016,4.78e-12,75;UBERON:0001017,6.25e-12,73;UBERON:0000955,1.26e-11,47;UBERON:0006238,1.26e-11,47;UBERON:0010371,2.07e-11,73;UBERON:0002616,2.36e-11,46;UBERON:0002346,7.17e-10,64;UBERON:0003075,7.17e-10,64;UBERON:0007284,7.17e-10,64;UBERON:0003080,6.41e-09,40;UBERON:0010314,1.12e-08,92;UBERON:0002780,1.63e-08,39;UBERON:0001890,1.63e-08,39;UBERON:0006240,1.63e-08,39;UBERON:0004111,3.33e-08,122;UBERON:0002020,9.91e-08,34;UBERON:0000025,1.01e-07,114;UBERON:0003056,1.31e-07,49;UBERON:0003528,2.67e-07,29;UBERON:0002791,2.67e-07,29;UBERON:0001893,2.67e-07,29
|phase1_expression=22.5809874417759,11.5161884520989,9.09998478779072,7.25914107136392,10.5188103288733,8.89760141133016,6.77476657727024,51.2619594063058,37.0274339258884,41.4294211589928,38.5240428507386,33.7436232550273,45.7105948916319,51.2283558175325,14.3237197580735,18.627724599864,23.785103856357,24.6060488979425,24.8177124826387,25.8877687596798,24.322380983206,18.9645716793691,21.4183827093927,15.1992801653736,15.5998311125676,10.9104073181854,6.8921919385452,9.9116767035509,11.9714754257516,13.3575968772763,10.4213340007993,8.25539875497521,9.22597181376855,0,10.9763615505484,10.3065480122265,9.80012910059372,28.4601508901097,31.253413780952,30.3643771504803,27.6468799374577,37.5675016727145,33.5002143591496,31.7259981298455,27.777279154147,24.9623582939887,45.3786979721863,23.9827672018491,49.4293911152562,50.9406335574622,23.937678097937,21.5628846547457,19.9661301208706,39.8949178106239,30.9206295211067,32.1574295044934,37.2493471920384,50.5358650431893,17.1968991730658,14.8117474196169,15.2119536841483,30.1571633541528,24.9002542911119,29.2467408116455,29.6659908770092,34.1030455174128,25.4660093940644,26.1268447618657,22.0858874217057,23.7610451463776,21.6634710191923,25.7085885963423,32.4676755198872,17.6386750869534,19.1690942036473,14.7075005857603,42.9451935897616,41.7537595538564,37.7872071810359,17.672762555846,15.2784364816024,24.4829284161677,44.3900968412196,36.5795696520592,33.004421519791,22.3917724959987,28.6167078406197,17.1487490159277,23.9294770932862,21.4623230703271,39.7114349521299,18.9293252935905,16.9992833426938,31.3027851149934,15.5946340187441,10.3046184032387,16.0106638950197,18.4064748384302,27.5373164879041,22.2603931941514,24.5067550411424,28.2318250311499,30.5766287647975,14.2213340630666,15.3708639117962,14.4415123320806,16.1767822404731,17.3559497172971,18.6435276225964,28.2040064223167,18.0424739836781,21.9215144384742,20.0635482612771,26.2257394561563,25.0463946199051,25.5103180399241,36.0904652892186,14.4599356919912,12.3845477272982,24.103260642164,14.575540218386,14.5462575940567,9.31958806090611,28.6925181071316,34.977600037847,11.240110429178,23.1243190296426,16.197373736822,22.2372897377863,34.601637702514,36.6000482254901,17.7172636479139,36.5031072403781,40.6587577155226,34.0772393077679,38.6134206101263,32.1812389766999,26.3742777693397,30.8321765289083,19.5710925974421,12.2313216384941,13.3343220571414,19.6267721487831,20.7972648613287,20.547022743701,20.7544226861457,23.4254311399322,26.6464471861186,9.48499168904506,13.0483195315795,18.1229657888867,19.5084201860542,25.0242524303038,19.5021213252413,26.7516777330327,20.6995637491233,13.3420505589515,11.5806558201622,19.3231179589003,12.4275463521301,12.4298811789981,13.6847166710371,12.0739815148457,13.3799677588235,18.6663206593728,14.4171045745253,17.1694976895756,16.9309746432396,22.5446994381468,23.9684497555479,24.0774364351192,19.2983983401439,21.515911298523,22.8150911892632,42.0579897128254,26.6522946062347,11.2342386214491,9.78467096655114,11.7308537794379,13.0052536241846,12.371276286921,11.6976444281539,14.2321948060717,13.8864707062168,19.9302205848695,23.3872515708095,19.1014758688205,26.0632978373908,22.8107981929371,19.7740269903929,17.0749059401008,16.9270082266212,11.9490777600441,13.3670759753383,15.7790829942313,17.9213168503877,16.8738663835834,19.147078830057,25.0416687012059,19.3369293853279,14.6008816892479,17.7691916047393,14.2297261001831,7.67487486294033,7.86235980452812,10.3436571697033,12.1716072833102,10.1294407096015,7.89340140522401,13.5217184601881,19.2940919862292,18.9447375099776,21.5652309791032,24.1891615984527,24.6509761760503,18.4382580901392,14.5311904952749,26.5343936749852,31.9623018988226,11.7484675297701,12.2223732331519,15.7862929770925,15.7242466353296,18.4256883185997,24.0424077294874,29.4651808265276,42.7191240527778,37.6489972402917,38.4285992464544,37.6885623846197,27.4569121166774,37.030158996867,16.5870412333199,15.2293591469239,19.6705709207614,18.4877620024171,40.6192992669114,42.7822656061542,18.688583772941,18.935319540328,15.7754109708128,14.8366722832723,18.0955654095551,19.1175038362042,23.3938607786514,21.7968928707401,17.0020494703456,23.9649803487276,20.5549644532192,28.276275845119,17.6005705658253,32.2298742637732,27.6907830901079,23.7556977080451,14.6019652173959,12.1390318077491,13.6045600634138,16.9744571780308,13.8791889653963,13.8345816574767,19.1236936944484,20.3578888507403,21.746340081468,23.0706833293146,16.8669773719998,14.4389760547462,40.5123130847008,13.5045820523483,18.8863678322822,16.7182887324642,22.699549906211,34.4251817971996,29.7833727289839,36.5357938937519,18.5390649370331,56.7709949915038,30.2123905335298,31.1635018059397,30.3553122188302,25.2711155448973,30.7980647528092,35.2902934451882,20.4036585640896,40.9789917443226,13.8405413446261,21.8770080041016,15.5563402990558,22.6042148405629,17.9069438314543,19.2173665493479,23.6270017691459,26.590775941495,21.1445959920768,16.2294005062569,12.1789357528737,13.6224042974989,13.9326889660124,20.9088296014469,16.1588297172171,23.4663962709588,22.647046868742,14.9200886930897,17.8868663142674,12.4267862617385,17.4744810992099,17.1944027950576,18.696809421652,27.2231663681667,29.5775995764004,28.5535852079415,28.165737274981,26.04087696879,28.6266010282191,22.4673232368186,23.9064905194028,15.4845449107807,14.798940716182,16.5364641035372,17.0196278100911,15.2172691317359,15.4971456729387,18.6302946755952,17.4273642066001,18.6787932404073,19.889976536955,17.2412776583997,16.4703818450182,16.067377553935,17.2977815228722,17.4582395383713,7.76950836809226,14.713072483954,31.0586540273545,28.0124911346676,18.3928825942158,20.5129819179337,21.4368379079066,28.5896099300157,33.3203587144069,27.6195141904306,34.3737308063638,29.730600545458,38.364621107156,35.5035131773159,39.1513050134447,41.4295506966283,42.142244035531,45.0451471224083,8.51056250190249,12.768795948833,12.1220860085435,13.6139761558245,8.59413966774727,12.501358574601,17.5574914963276,16.2767695218726,12.8367683836726,13.1402550117175,12.9274442944022,15.2787336522722,15.0762827026511,14.9818856627394,17.1157697487728,17.6228665774737,16.4555742841695,14.4681915347779,18.5438655361488,14.7198920134397,17.1434626192708,18.6349596467304,19.0748951957857,15.5520665796592,17.5984541376668,17.1767654020103,15.1830217484401,19.9932980692761,14.1236278399696,13.4674145197857,15.1852823198943,12.2145558145699,14.7323175541088,15.0288735950387,16.0112487114347,21.4837097026634,17.3109390249602,15.9004579995741,19.1288332068843,24.4856475222662,20.4043695345971
|short_description=p2@Sdf4
}}

Revision as of 07:42, 5 August 2015

Short description:p2@Sdf4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Sdf4_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000097734_5end
EntrezGene:20318
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@Sdf4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G722.58
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I511.52
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I69.10
CD326+ enterocyte, pool1.CNhs13542.11848-124I37.26
CD326+ enterocyte, pool2.CNhs13197.11849-124I410.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I78.90
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.77
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E951.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E737.03
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F241.43
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E638.52
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F133.74
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E445.71
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E851.23
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A114.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A318.63
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A523.79
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A224.61
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A424.82
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A625.89
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A324.32
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H218.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I921.42
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D115.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D215.60
GP2+ M cell, pool1.CNhs13228.11845-124H910.91
GP2+ M cell, pool2.CNhs13231.11846-124I16.89
GP2+ M cell, pool3.CNhs13240.11847-124I29.91
Ileum epithelium, pool1.CNhs13199.10252-104B911.97
Ileum epithelium, pool2.CNhs13232.10253-104C113.36
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C810.42
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I38.26
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G69.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F510.98
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F610.31
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F79.80
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G828.46
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H131.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H330.36
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G927.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H237.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H433.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D831.73
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D927.78
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B324.96
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B745.38
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C223.98
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B849.43
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C350.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C423.94
Mouse Astrocytes, donor3.CNhs12107.11633-122C421.56
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A219.97
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I939.89
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A130.92
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C132.16
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E137.25
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C550.54
Mouse Granule cells, donor1.CNhs12131.11713-123C317.20
Mouse Granule cells, donor2.CNhs12357.11731-123E314.81
Mouse Granule cells, donor3.CNhs12108.11636-122C715.21
Mouse Meningeal cells, donor1.CNhs12132.11716-123C630.16
Mouse Meningeal cells, donor3.CNhs12109.11639-122D124.90
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C729.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E729.67
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D234.10
Mouse Microglia, donor1.CNhs12629.11718-123C825.47
Mouse Microglia, donor2.CNhs12634.11736-123E826.13
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D522.09
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F523.76
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D921.66
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F125.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D532.47
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D217.64
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F219.17
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D614.71
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D342.95
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F341.75
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D737.79
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D417.67
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F415.28
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D824.48
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E444.39
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E536.58
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I633.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D622.39
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F628.62
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E117.15
Mouse Schwann, donor1.CNhs12507.11728-123D923.93
Mouse Schwann, donor2.CNhs12573.11746-123F921.46
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G339.71
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F718.93
Mouse hepatocyte, donor1.CNhs13078.11714-123C417.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C831.30
Mouse hepatocyte, donor6.CNhs13090.11822-124F415.59
Mouse hepatocyte, donor8.CNhs13091.11824-124F610.30
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A716.01
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I718.41
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E327.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I822.26
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G624.51
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H128.23
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I830.58
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G115.37
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G214.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G316.18
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B617.36
accessory axillary lymph node, adult.CNhs10475.1063-29H918.64
adrenal gland, adult.CNhs10508.49-24D728.20
adrenal gland, embryo E14.CNhs11038.406-44C518.04
adrenal gland, embryo E16.CNhs11004.1254-43D621.92
adrenal gland, embryo E17.CNhs11043.1263-45I120.06
adrenal gland, embryo E18.CNhs11026.1262-18F526.23
adrenal gland, neonate N00.CNhs11191.1311-23C125.05
adrenal gland, neonate N25.CNhs11223.1377-27I325.51
amnion, adult pregnant day17.5.CNhs10488.583-22A836.09
aorta, adult.CNhs10498.46-23H114.46
bone (os femoris), adult.CNhs10483.56-12G212.38
bone (os femoris), neonate N02.CNhs11227.1985-43F524.10
bone (os femoris), neonate N16.CNhs11225.1525-43A614.58
bone (os femoris), neonate N20.CNhs11195.1350-25C314.55
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B228.69
cerebellum, neonate N30.CNhs11135.1395-42I234.98
colon, adult.CNhs10468.36-18H711.24
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C723.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D116.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D422.24
corpora quadrigemina, adult.CNhs10501.16-22A434.60
corpus striatum, adult.CNhs10487.19-21D836.60
corpus striatum, neonate N00.CNhs11226.630-43F117.72
cortex, adult.CNhs10473.12-14D536.50
cortex, neonate N30.CNhs11107.1392-42F240.66
diencephalon, adult.CNhs10482.20-12F234.08
diencephalon, neonate N30.CNhs11201.1388-42B238.61
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B132.18
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A226.37
epididymis, adult.CNhs10490.58-23B230.83
eyeball, adult.CNhs10484.31-12G419.57
eyeball, embryo E12.CNhs11016.345-16C612.23
eyeball, embryo E14.CNhs10521.399-16E213.33
eyeball, embryo E15.CNhs10593.426-16C919.63
eyeball, embryo E17.CNhs11023.1261-18D420.80
eyeball, neonate N00.CNhs11207.633-15C620.55
eyeball, neonate N01.CNhs11140.1532-43E720.75
eyeball, neonate N02.CNhs11205.1551-44G823.43
eyeball, neonate N16.CNhs11188.777-19A226.65
forelimb, embryo E11.CNhs10596.335-25E29.48
forelimb, embryo E12.CNhs10600.359-14H213.05
forelimb, embryo E13.CNhs10589.384-1E218.12
forelimb, embryo E14.CNhs10577.413-26A819.51
forelimb, embryo E15.CNhs11007.437-20E725.02
forelimb, embryo E17.CNhs10598.1517-43C419.50
forelimb, embryo E18.CNhs11008.1520-43B526.75
gonad, embryo E13.CNhs11044.1564-45I620.70
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C813.34
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D211.58
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D519.32
heart, embryo E11.CNhs10586.331-24E912.43
heart, embryo E12.CNhs11015.353-12F512.43
heart, embryo E13.CNhs11013.376-3I913.68
heart, embryo E14.CNhs10597.403-26D412.07
heart, embryo E15.CNhs11017.431-16C813.38
heart, embryo E16.CNhs11021.457-17C618.67
heart, embryo E17.CNhs11025.479-18E514.42
heart, embryo E18.CNhs11030.1283-20G317.17
heart, neonate N00.CNhs11213.639-21E316.93
heart, neonate N03.CNhs11221.1349-25I222.54
heart, neonate N10.CNhs11118.749-24G123.97
heart, neonate N16.CNhs11209.782-15G124.08
heart, neonate N20.CNhs11127.821-26I619.30
heart, neonate N25.CNhs11196.1351-25D321.52
heart, neonate N30.CNhs11202.1390-42D222.82
hippocampus, adult.CNhs10478.13-16E842.06
hippocampus, neonate N00.CNhs11228.627-43G126.65
intestinal mucosa, adult.CNhs10506.860-29I311.23
intestine, adult.CNhs10496.178-9A39.78
intestine, embryo E12.CNhs11019.1251-16I511.73
intestine, embryo E13.CNhs11010.381-16D513.01
intestine, embryo E15.CNhs10602.976-16D812.37
intestine, embryo E16.CNhs10585.463-22H411.70
intestine, embryo E17.CNhs10582.482-18D314.23
intestine, embryo E18.CNhs10526.1289-20F713.89
intestine, neonate N00.CNhs11126.644-26D119.93
intestine, neonate N01.CNhs11192.1322-23E923.39
intestine, neonate N06.CNhs11102.688-20B819.10
intestine, neonate N07.CNhs11095.720-20F226.06
intestine, neonate N10.CNhs11098.755-23A522.81
intestine, neonate N20.CNhs11187.827-18D119.77
intestine, neonate N25.CNhs11121.1352-25E317.07
intestine, neonate N30.CNhs11131.1384-42G116.93
kidney, embryo E14.CNhs10606.411-4I911.95
kidney, embryo E15.CNhs10997.434-16F813.37
kidney, embryo E16.CNhs10584.464-22A515.78
kidney, embryo E17.CNhs11028.483-18I217.92
kidney, embryo E18.CNhs11001.1288-20C716.87
kidney, neonate N00.CNhs11214.646-21G719.15
kidney, neonate N10.CNhs11206.758-6D525.04
kidney, neonate N20.CNhs11113.832-19I119.34
kidney, neonate N25.CNhs11122.1353-25F314.60
kidney, neonate N30.CNhs11203.1385-42H117.77
liver, adult pregnant day01.CNhs10466.508-5B214.23
liver, embryo E12.CNhs10601.355-15F87.67
liver, embryo E13.CNhs10524.378-3H67.86
liver, embryo E14.CNhs10594.409-16E110.34
liver, embryo E15.CNhs10520.433-16D712.17
liver, embryo E16.CNhs10523.462-17F510.13
liver, embryo E17.CNhs10510.481-18A37.89
liver, embryo E18.CNhs10579.499-43G413.52
liver, neonate N00.CNhs11117.641-24F419.29
liver, neonate N03.CNhs11123.1345-25G218.94
liver, neonate N06.CNhs11101.684-20A821.57
liver, neonate N07.CNhs11103.716-20H224.19
liver, neonate N10.CNhs11115.751-24B924.65
liver, neonate N20.CNhs11220.823-25A318.44
liver, neonate N25.CNhs11198.1368-26H114.53
liver, neonate N30.CNhs11106.1382-42D126.53
lung, adult.CNhs10474.28-22B131.96
lung, embryo E12.CNhs10522.354-16G211.75
lung, embryo E14.CNhs10604.404-26F812.22
lung, embryo E15.CNhs11020.432-17C515.79
lung, embryo E16.CNhs10998.458-17B615.72
lung, embryo E17.CNhs10605.480-44A618.43
lung, embryo E18.CNhs10583.1287-20I624.04
lung, neonate N00.CNhs11224.640-42C629.47
lung, neonate N06.CNhs11212.683-20E542.72
lung, neonate N07.CNhs11111.715-19A337.65
lung, neonate N10.CNhs11219.750-23E638.43
lung, neonate N20.CNhs11109.822-18A437.69
lung, neonate N25.CNhs11119.1359-25C727.46
lung, neonate N30.CNhs11133.1394-42H237.03
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A116.59
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A115.23
mammary gland, adult lactating day02.CNhs10480.595-22B619.67
mammary gland, adult pregnant day19.CNhs10476.588-5H218.49
medulla oblongata, adult.CNhs10477.17-12C240.62
medulla oblongata, neonate N30.CNhs11200.1396-42A342.78
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C718.69
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C218.94
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E115.78
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E214.84
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E318.10
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D719.12
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D823.39
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D921.80
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D417.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D523.96
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D620.55
olfactory brain, adult.CNhs10489.18-22I928.28
ovary, adult.CNhs10507.91-2I717.60
ovary, embryo E18.CNhs11040.505-44H732.23
ovary, neonate N00.CNhs11217.1299-22I427.69
oviduct, adult pregnant day01.CNhs10500.988-6G623.76
pancreas, adult.CNhs10486.34-16E414.60
pancreas, embryo E14.CNhs11012.405-44F412.14
pancreas, embryo E15.CNhs11042.1556-45F213.60
pancreas, embryo E16.CNhs11003.460-26E516.97
pancreas, embryo E17.CNhs10599.1558-45G313.88
pancreas, embryo E18.CNhs10580.1535-43I713.83
pancreas, neonate N00.CNhs11105.645-26G919.12
pancreas, neonate N01.CNhs11138.1531-43D720.36
pancreas, neonate N02.CNhs11139.1539-43D821.75
pancreas, neonate N16.CNhs11136.787-43B623.07
pancreas, neonate N25.CNhs11094.1555-45E216.87
pancreas, neonate N30.CNhs11182.1548-44H514.44
pituitary gland, adult.CNhs10493.21-1G840.51
pituitary gland, embryo E12.CNhs11018.346-16E613.50
pituitary gland, embryo E13.CNhs11009.370-44C718.89
pituitary gland, embryo E14.CNhs11037.398-44A516.72
pituitary gland, embryo E15.CNhs10592.427-16B922.70
pituitary gland, embryo E16.CNhs11036.449-43F634.43
pituitary gland, embryo E17.CNhs11039.1265-44F529.78
pituitary gland, neonate N00.CNhs11190.1308-22E936.54
placenta, adult pregnant day10.CNhs10472.539-13I718.54
placenta, adult pregnant day17.CNhs10464.577-18G356.77
prostate, adult.CNhs10470.859-1F830.21
skin, adult.CNhs10492.30-1C331.16
skin, neonate N00.CNhs11124.650-25G430.36
skin, neonate N03.CNhs11215.662-22H325.27
skin, neonate N06.CNhs11097.693-20I530.80
skin, neonate N10.CNhs11108.762-6C435.29
small intestine, neonate N16.CNhs11114.790-21I120.40
spinal cord, adult.CNhs10505.24-13C940.98
spleen, adult.CNhs10465.25-2G213.84
spleen, embryo E16.CNhs11035.461-43C121.88
spleen, embryo E18.CNhs11011.1271-21F215.56
spleen, neonate N10.CNhs11116.752-24D122.60
spleen, neonate N20.CNhs11112.824-19H117.91
spleen, neonate N25.CNhs11099.1354-25G319.22
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C623.63
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C926.59
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D321.14
stomach, adult.CNhs10503.33-1H616.23
stomach, embryo E12.CNhs10588.356-43E312.18
stomach, embryo E15.CNhs10603.1252-16G813.62
stomach, embryo E16.CNhs11022.459-17D413.93
stomach, embryo E17.CNhs11006.1035-18D520.91
stomach, embryo E18.CNhs10999.1286-20C616.16
stomach, neonate N03.CNhs11193.1340-24B823.47
stomach, neonate N07.CNhs11210.718-18A922.65
stomach, neonate N25.CNhs11104.1355-25E414.92
stomach, neonate N30.CNhs11134.1386-42I117.89
submandibular gland, adult.CNhs10469.59-29C112.43
testis, adult.CNhs10504.57-7G517.47
testis, embryo E13.CNhs11031.389-23F517.19
testis, embryo E15.CNhs11034.443-27C518.70
testis, embryo E16.CNhs11033.470-26G527.22
testis, embryo E17.CNhs11029.486-18I529.58
testis, embryo E18.CNhs11027.503-18G528.55
testis, neonate N00.CNhs11189.1300-22B728.17
testis, neonate N07.CNhs11222.726-26I426.04
testis, neonate N10.CNhs11204.763-44D928.63
testis, neonate N20.CNhs11110.839-18H322.47
testis, neonate N30.CNhs11130.1391-42E223.91
thymus, adult.CNhs10471.38-12B515.48
thymus, embryo E14.CNhs11041.402-44I414.80
thymus, embryo E15.CNhs11005.430-45I216.54
thymus, embryo E16.CNhs11002.456-26C517.02
thymus, embryo E17.CNhs10581.478-18C115.22
thymus, embryo E18.CNhs10595.1273-19G415.50
thymus, neonate N02.CNhs11181.1541-43F818.63
thymus, neonate N03.CNhs11137.2104-43C717.43
thymus, neonate N06.CNhs11197.681-26C418.68
thymus, neonate N07.CNhs11211.713-19D319.89
thymus, neonate N10.CNhs11194.748-24E417.24
thymus, neonate N20.CNhs11186.820-7A216.47
thymus, neonate N25.CNhs11125.1362-25G716.07
thymus, neonate N30.CNhs11132.1393-42G217.30
tongue, adult.CNhs10499.32-1B417.46
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H37.77
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F714.71
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G531.06
urinary bladder, adult.CNhs10481.879-12E428.01
uterus, adult pregnant day19.CNhs10497.590-15F518.39
uterus, adult.CNhs10509.92-27E520.51
vagina, adult.CNhs10502.89-27D521.44
vesicular gland, adult.CNhs10491.51-27F828.59
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A133.32
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A227.62
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A334.37
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D729.73
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A438.36
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A535.50
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A639.15
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A741.43
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A842.14
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A945.05
whole body, embryo E11.CNhs11014.324-5I88.51
whole body, embryo E12.CNhs10587.857-27C912.77
whole body, embryo E13.CNhs10512.372-23H212.12
whole body, embryo E14.5.CNhs10578.420-27D213.61
whole body, embryo E14.CNhs10519.395-14B18.59
whole body, embryo E16.CNhs10514.453-14F212.50
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G517.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G516.28
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G512.84
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G513.14
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G512.93
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G515.28
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G515.08
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G514.98
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G517.12
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G517.62
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G516.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G514.47
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G518.54
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G514.72
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G517.14
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G518.63
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G519.07
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G515.55
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G517.60
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G517.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G515.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G519.99
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G514.12
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G513.47
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G515.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G512.21
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G514.73
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G515.03
whole body, embryo E17.5.CNhs10513.490-9F916.01
whole body, embryo E17.CNhs10517.475-3I521.48
whole body, embryo E18.CNhs10516.493-3B317.31
whole body, neonate N00.CNhs10525.657-19C215.90
whole body, neonate N01.CNhs10576.659-23C619.13
whole body, neonate N06.CNhs10515.692-21D124.49
whole body, neonate N10.CNhs10518.761-6B420.40





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.76e-1354
neural tube2.21e-1252
neural rod2.21e-1252
future spinal cord2.21e-1252
neural keel2.21e-1252
ectoderm-derived structure2.61e-1295
ectoderm2.61e-1295
presumptive ectoderm2.61e-1295
nervous system4.78e-1275
central nervous system6.25e-1273
brain1.26e-1147
future brain1.26e-1147
ecto-epithelium2.07e-1173
regional part of brain2.36e-1146
neurectoderm7.17e-1064
neural plate7.17e-1064
presumptive neural plate7.17e-1064
anterior neural tube6.41e-0940
structure with developmental contribution from neural crest1.12e-0892
regional part of forebrain1.63e-0839
forebrain1.63e-0839
future forebrain1.63e-0839
anatomical conduit3.33e-08122
gray matter9.91e-0834
tube1.01e-07114
pre-chordal neural plate1.31e-0749
brain grey matter2.67e-0729
regional part of telencephalon2.67e-0729
telencephalon2.67e-0729
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