FFCP PHASE1:Mm9::chr18:20904728..20904740,-: Difference between revisions
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{{FFCP|EntrezGene=56386|HGNC=|MCL_coexpression_id=240|UniProt=Q9WVK5,Q3UUA9|association_with_transcript=164bp_to_ENSMUST00000070080,NM_019737,uc008eeu.2_5end|description=CAGE_peak_4_at_B4galt6_5end|id=chr18:20904728..20904740,-|ontology_enrichment_celltype=CL:0002319!8.23e-10!43;CL:0000221!9.65e-10!44;CL:0000133!9.65e-10!44;CL:0000055!4.22e-08!50;CL:0000540!4.23e-07!33;CL:0000047!4.23e-07!33;CL:0000031!4.23e-07!33;CL:0000404!4.23e-07!33|ontology_enrichment_celltype_v019_2=CL:0002319,2.59e-12,43;CL:0000221,8.52e-12,44;CL:0000133,8.52e-12,44;CL:0000540,2.17e-09,33;CL:0000047,2.17e-09,33;CL:0000031,2.17e-09,33;CL:0000404,2.17e-09,33;CL:0002321,2.67e-08,70;CL:0000473,1.35e-07,7;CL:0000107,2.14e-07,9;CL:0000393,7.91e-07,39;CL:0000211,7.91e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.95e-21!75;UBERON:0001016!2.95e-21!75;UBERON:0001017!7.98e-21!73;UBERON:0005743!7.98e-21!73;UBERON:0004121!1.95e-15!102;UBERON:0000924!1.95e-15!102;UBERON:0006601!1.95e-15!102;UBERON:0001049!1.63e-13!52;UBERON:0005068!1.63e-13!52;UBERON:0006241!1.63e-13!52;UBERON:0007135!1.63e-13!52;UBERON:0000955!4.49e-13!50;UBERON:0006238!4.49e-13!50;UBERON:0002616!1.54e-12!49;UBERON:0000033!8.30e-12!63;UBERON:0002346!9.39e-11!71;UBERON:0003075!9.39e-11!71;UBERON:0007284!9.39e-11!71;UBERON:0003080!4.63e-09!40;UBERON:0002020!4.87e-09!34;UBERON:0002780!1.43e-08!39;UBERON:0001890!1.43e-08!39;UBERON:0006240!1.43e-08!39;UBERON:0003056!1.18e-07!49;UBERON:0002791!5.04e-07!29;UBERON:0003528!5.04e-07!29;UBERON:0001893!5.04e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.24e-26,73;UBERON:0001016,2.21e-26,75;UBERON:0004121,4.45e-20,95;UBERON:0000924,4.45e-20,95;UBERON:0006601,4.45e-20,95;UBERON:0000073,7.98e-19,54;UBERON:0001049,4.82e-17,52;UBERON:0005068,4.82e-17,52;UBERON:0006241,4.82e-17,52;UBERON:0007135,4.82e-17,52;UBERON:0002346,2.89e-15,64;UBERON:0003075,2.89e-15,64;UBERON:0007284,2.89e-15,64;UBERON:0000955,4.68e-14,47;UBERON:0006238,4.68e-14,47;UBERON:0002616,2.49e-13,46;UBERON:0010371,2.72e-13,73;UBERON:0010314,1.55e-12,92;UBERON:0002020,1.58e-12,34;UBERON:0003080,1.06e-10,40;UBERON:0002780,5.07e-10,39;UBERON:0001890,5.07e-10,39;UBERON:0006240,5.07e-10,39;UBERON:0003528,1.49e-09,29;UBERON:0002791,1.49e-09,29;UBERON:0001893,1.49e-09,29;UBERON:0002021,3.72e-08,10;UBERON:0000411,3.72e-08,10;UBERON:0001950,3.72e-08,10;UBERON:0002619,7.15e-08,17;UBERON:0003056,9.50e-08,49;UBERON:0003076,1.04e-07,12;UBERON:0003057,1.04e-07,12;UBERON:0002410,2.14e-07,9|phase1_expression=0.960893082628764,6.97950815278722,10.4649825059593,3.93203474698879,2.50447864973174,1.6787927191189,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,0.425216450755349,0,0,2.87986361028132,3.67054849707472,5.16808767703518,3.4460959692726,2.80112602491656,0.760093677825496,1.51218077855958,2.21730510655305,0,0,0,0.288851619751275,0,0.204169356262369,0,0.7813353445238,0,0,0,0,0.755380907853464,0.202753862439029,0.550640256485045,2.34717403304412,1.09012578190223,1.75748946187577,2.91644848611425,0.55994568650145,1.43752564364972,0,0,0,0.771778308107841,0.85960031981627,0,1.01158230429799,0.528990979272033,0,0.677689064138264,0.889294796111139,8.09909745553259,10.8775299882367,4.9733608046227,5.69240209984969,3.07374644257244,0.103689612308478,0,0,2.85650984403804,2.42955395046775,0.122490799214954,0.670918297127655,0.919218786610021,7.70811166995721,3.44755812830007,3.5329502648936,1.31886287730194,1.73826522844578,1.04182674111352,1.67509799400829,2.25105044012672,4.88954392885792,2.65165726926301,3.70166370077668,1.4911955666024,1.21161909333094,0.982430281388212,1.15945795480671,0,0,0,0,0,1.12355536105401,0.852151612890289,0,0.70667914902068,0.704217098883403,0,0,0,0,0,0,0.5709193985953,0,0.148442139064825,0.173485326766136,0.608930956624282,0,0.150722640552623,0.823120949949934,0,0,0.144599356919912,0,1.45590164952668,0.883366073841574,0.484875253135222,0,2.04946557908083,1.46612694769419,1.27728527604296,0,0,0,3.59497534571574,4.11750542536764,0.502617408451458,3.47648640384553,2.55715457330331,3.74018480207208,2.10913641988085,0.712875546952214,0.746441823660558,0,0,0.520481771850815,0.459804208866946,0.540186389416048,0.452114453507145,0.748401490664606,0.896796041993948,0.187403449119458,1.29351685369508,1.07783996466421,0.378212160335639,0.527853372491847,0.43839146485515,1.11218899690239,0,0.61734640922383,0.59710280045548,0.702213187313235,2.83082697826187,2.27330799516474,1.86413195281952,2.11073453982987,1.2604344302271,2.3674473558521,1.18058539048442,1.3884040159864,1.16266972375204,1.87791380979733,0.934122738937356,1.81015834904829,0.492502392237286,1.29710095273369,0.877199924551994,0.658650345873152,0.268412837520744,4.41608891984667,1.44066457330998,1.65209391491899,0.793351699990633,0.853153002140936,0.928946687441754,0.902072229254653,0.605050573870028,0,0.380451252225118,0.474529061544512,0.658795818896044,0.502670417600539,0.795825888164603,0.58489226135736,1.7976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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:56386 | |||
|HGNC= | |||
|MCL_coexpression_id=240 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9WVK5,uniprot:Q3UUA9 | |||
|association_with_transcript=164bp_to_ENSMUST00000070080,NM_019737,uc008eeu.2_5end | |||
|cluster_id=chr18:20904728..20904740,- | |||
|description=CAGE_peak_4_at_B4galt6_5end | |||
|id=chr18:20904728..20904740,- | |||
|ontology_enrichment_celltype=CL:0002319!8.23e-10!43;CL:0000221!9.65e-10!44;CL:0000133!9.65e-10!44;CL:0000055!4.22e-08!50;CL:0000540!4.23e-07!33;CL:0000047!4.23e-07!33;CL:0000031!4.23e-07!33;CL:0000404!4.23e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.59e-12,43;CL:0000221,8.52e-12,44;CL:0000133,8.52e-12,44;CL:0000540,2.17e-09,33;CL:0000047,2.17e-09,33;CL:0000031,2.17e-09,33;CL:0000404,2.17e-09,33;CL:0002321,2.67e-08,70;CL:0000473,1.35e-07,7;CL:0000107,2.14e-07,9;CL:0000393,7.91e-07,39;CL:0000211,7.91e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.95e-21!75;UBERON:0001016!2.95e-21!75;UBERON:0001017!7.98e-21!73;UBERON:0005743!7.98e-21!73;UBERON:0004121!1.95e-15!102;UBERON:0000924!1.95e-15!102;UBERON:0006601!1.95e-15!102;UBERON:0001049!1.63e-13!52;UBERON:0005068!1.63e-13!52;UBERON:0006241!1.63e-13!52;UBERON:0007135!1.63e-13!52;UBERON:0000955!4.49e-13!50;UBERON:0006238!4.49e-13!50;UBERON:0002616!1.54e-12!49;UBERON:0000033!8.30e-12!63;UBERON:0002346!9.39e-11!71;UBERON:0003075!9.39e-11!71;UBERON:0007284!9.39e-11!71;UBERON:0003080!4.63e-09!40;UBERON:0002020!4.87e-09!34;UBERON:0002780!1.43e-08!39;UBERON:0001890!1.43e-08!39;UBERON:0006240!1.43e-08!39;UBERON:0003056!1.18e-07!49;UBERON:0002791!5.04e-07!29;UBERON:0003528!5.04e-07!29;UBERON:0001893!5.04e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.24e-26,73;UBERON:0001016,2.21e-26,75;UBERON:0004121,4.45e-20,95;UBERON:0000924,4.45e-20,95;UBERON:0006601,4.45e-20,95;UBERON:0000073,7.98e-19,54;UBERON:0001049,4.82e-17,52;UBERON:0005068,4.82e-17,52;UBERON:0006241,4.82e-17,52;UBERON:0007135,4.82e-17,52;UBERON:0002346,2.89e-15,64;UBERON:0003075,2.89e-15,64;UBERON:0007284,2.89e-15,64;UBERON:0000955,4.68e-14,47;UBERON:0006238,4.68e-14,47;UBERON:0002616,2.49e-13,46;UBERON:0010371,2.72e-13,73;UBERON:0010314,1.55e-12,92;UBERON:0002020,1.58e-12,34;UBERON:0003080,1.06e-10,40;UBERON:0002780,5.07e-10,39;UBERON:0001890,5.07e-10,39;UBERON:0006240,5.07e-10,39;UBERON:0003528,1.49e-09,29;UBERON:0002791,1.49e-09,29;UBERON:0001893,1.49e-09,29;UBERON:0002021,3.72e-08,10;UBERON:0000411,3.72e-08,10;UBERON:0001950,3.72e-08,10;UBERON:0002619,7.15e-08,17;UBERON:0003056,9.50e-08,49;UBERON:0003076,1.04e-07,12;UBERON:0003057,1.04e-07,12;UBERON:0002410,2.14e-07,9 | |||
|phase1_expression=0.960893082628764,6.97950815278722,10.4649825059593,3.93203474698879,2.50447864973174,1.6787927191189,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,0.425216450755349,0,0,2.87986361028132,3.67054849707472,5.16808767703518,3.4460959692726,2.80112602491656,0.760093677825496,1.51218077855958,2.21730510655305,0,0,0,0.288851619751275,0,0.204169356262369,0,0.7813353445238,0,0,0,0,0.755380907853464,0.202753862439029,0.550640256485045,2.34717403304412,1.09012578190223,1.75748946187577,2.91644848611425,0.55994568650145,1.43752564364972,0,0,0,0.771778308107841,0.85960031981627,0,1.01158230429799,0.528990979272033,0,0.677689064138264,0.889294796111139,8.09909745553259,10.8775299882367,4.9733608046227,5.69240209984969,3.07374644257244,0.103689612308478,0,0,2.85650984403804,2.42955395046775,0.122490799214954,0.670918297127655,0.919218786610021,7.70811166995721,3.44755812830007,3.5329502648936,1.31886287730194,1.73826522844578,1.04182674111352,1.67509799400829,2.25105044012672,4.88954392885792,2.65165726926301,3.70166370077668,1.4911955666024,1.21161909333094,0.982430281388212,1.15945795480671,0,0,0,0,0,1.12355536105401,0.852151612890289,0,0.70667914902068,0.704217098883403,0,0,0,0,0,0,0.5709193985953,0,0.148442139064825,0.173485326766136,0.608930956624282,0,0.150722640552623,0.823120949949934,0,0,0.144599356919912,0,1.45590164952668,0.883366073841574,0.484875253135222,0,2.04946557908083,1.46612694769419,1.27728527604296,0,0,0,3.59497534571574,4.11750542536764,0.502617408451458,3.47648640384553,2.55715457330331,3.74018480207208,2.10913641988085,0.712875546952214,0.746441823660558,0,0,0.520481771850815,0.459804208866946,0.540186389416048,0.452114453507145,0.748401490664606,0.896796041993948,0.187403449119458,1.29351685369508,1.07783996466421,0.378212160335639,0.527853372491847,0.43839146485515,1.11218899690239,0,0.61734640922383,0.59710280045548,0.702213187313235,2.83082697826187,2.27330799516474,1.86413195281952,2.11073453982987,1.2604344302271,2.3674473558521,1.18058539048442,1.3884040159864,1.16266972375204,1.87791380979733,0.934122738937356,1.81015834904829,0.492502392237286,1.29710095273369,0.877199924551994,0.658650345873152,0.268412837520744,4.41608891984667,1.44066457330998,1.65209391491899,0.793351699990633,0.853153002140936,0.928946687441754,0.902072229254653,0.605050573870028,0,0.380451252225118,0.474529061544512,0.658795818896044,0.502670417600539,0.795825888164603,0.58489226135736,1.79763881730844,0.432276099749388,0.995706366271836,0.758671603812327,0.685491075658373,0,0.407302655690628,0.969762435838129,0.210407459670956,0.758838445491087,0.442830443938806,0,0.370191491765402,0,0.166845105716094,0,0,0.405720242777006,0.241177159752417,0,0,0.324270453550071,0.274561413188081,0,0,0,0,0.179397413521912,0,0.184753190166605,0.37898282354097,0,0.509235257325564,0.234690248288502,0.167506257441816,0.238043640886014,0,0,0.44292937929755,0,0,0,0.144649058581512,6.03165135757089,7.07077388964322,0,0,2.88991061978026,1.17211686592203,1.3114795630134,0.252470927204373,2.83957397474631,2.73307121007647,4.09304455692318,2.62865677747807,2.45078541490634,3.11384183867716,2.02405350837447,3.50707029493574,1.97643888973262,3.53453448063988,0.709700426041343,0.178065603667255,0.325773918707152,0.494910368917606,0,0.971122544619926,0.302323556964751,0.943025398779491,0.295301892880773,0.614870295887855,0.775284879504663,0,0,0.632073515871632,0,0,4.76615448055303,0.720244376125241,0.905510786479282,0.214337035031592,0.354680467284547,0.891844088010353,1.64549020602121,3.65357938937519,0.23467170806371,0,0,1.81374878235628,0.484393280087717,0.482503399425247,0.477489376012546,2.1338316966858,1.7488850197791,2.78137953015765,0.683483523191411,0,0,0.188368457004691,0,0,0.169978429993855,0.279902904647316,0.276399947608848,0,0.316335993581135,1.01659733563424,0.324016022465404,0.627264888043406,0,0.269728692769641,0.661227645802687,0.26175594198403,0.648074866458964,1.24267862617385,0,0,0,0.194451188344048,0.516639293910924,0,0,0.39061315453185,0,0,0.576060012515731,0,0.405450430580328,0.102710957164827,0,0,0,0,0.147689527174577,0.302899349844443,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0,0.906921534460845,1.10992976687032,3.22969883794113,0.671538465456314,1.73870634628971,0.93841237725591,0.183151624267265,0,0,3.3885110557024,3.22227665555024,4.58316410751517,4.1244763762485,2.05524755931193,1.5107877947794,1.35004500046361,2.70192721934532,3.17199686288943,3.62432218226274,0.62272408550506,0,0.512200817262403,0.729320151204882,1.04806581313991,1.10306105070008,0.888986911206461,0.618105171716683,0.962757628775446,0,0.760437899670719,0.377252682772152,0.749132059759059,0.768301828858431,0.746661096422973,0.952587382566147,1.15884325944855,0.964546102318525,0.412085900803307,0.735994600671987,0,1.24233064311536,1.1921809497366,0.436039249896986,0.752875043322645,0.676916863133412,0.182927972872773,0.789209134313529,0.543216455383447,1.12228454331548,0.711810108745045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| |||
|short_description=p4@B4galt6 | |||
}} |
Revision as of 13:59, 5 August 2015
Short description: | p4@B4galt6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_B4galt6_5end |
Coexpression cluster: | MCL_coexpression_mm9:240 |
Association with transcript: | 164bp_to_ENSMUST00000070080, NM_019737, uc008eeu.2_5end |
EntrezGene: | 56386 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.59e-12 | 43 |
ectodermal cell | 8.52e-12 | 44 |
neurectodermal cell | 8.52e-12 | 44 |
neuron | 2.17e-09 | 33 |
neuronal stem cell | 2.17e-09 | 33 |
neuroblast | 2.17e-09 | 33 |
electrically signaling cell | 2.17e-09 | 33 |
embryonic cell | 2.67e-08 | 70 |
defensive cell | 1.35e-07 | 7 |
autonomic neuron | 2.14e-07 | 9 |
electrically responsive cell | 7.91e-07 | 39 |
electrically active cell | 7.91e-07 | 39 |