FFCP PHASE1:Mm9::chr7:88638553..88638569,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=11775|HGNC=|MCL_coexpression_id=13|UniProt=|association_with_transcript=22bp_to_ENSMUST00000152355_5end|description=CAGE_peak_3_at_Ap3b2_5end|id=chr7:88638553..88638569,-|ontology_enrichment_celltype=CL:0000540!1.90e-17!33;CL:0000047!1.90e-17!33;CL:0000031!1.90e-17!33;CL:0000404!1.90e-17!33;CL:0000221!4.67e-17!44;CL:0000133!4.67e-17!44;CL:0002319!5.29e-17!43;CL:0000117!2.39e-15!23;CL:0000337!2.39e-15!23;CL:0000393!6.82e-13!39;CL:0000211!6.82e-13!39;CL:0000055!1.40e-12!50|ontology_enrichment_celltype_v019_2=CL:0000540,5.29e-21,33;CL:0000047,5.29e-21,33;CL:0000031,5.29e-21,33;CL:0000404,5.29e-21,33;CL:0002319,1.59e-19,43;CL:0000117,4.06e-19,23;CL:0000337,4.06e-19,23;CL:0000221,9.23e-19,44;CL:0000133,9.23e-19,44;CL:0000393,7.08e-16,39;CL:0000211,7.08e-16,39;CL:0002321,3.67e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.08e-38!75;UBERON:0001016!1.08e-38!75;UBERON:0001017!1.90e-38!73;UBERON:0005743!1.90e-38!73;UBERON:0004121!1.35e-36!102;UBERON:0000924!1.35e-36!102;UBERON:0006601!1.35e-36!102;UBERON:0002346!7.89e-36!71;UBERON:0003075!7.89e-36!71;UBERON:0007284!7.89e-36!71;UBERON:0000033!9.30e-31!63;UBERON:0001049!9.32e-31!52;UBERON:0005068!9.32e-31!52;UBERON:0006241!9.32e-31!52;UBERON:0007135!9.32e-31!52;UBERON:0000955!1.84e-29!50;UBERON:0006238!1.84e-29!50;UBERON:0002616!9.64e-29!49;UBERON:0003056!9.18e-28!49;UBERON:0003080!1.60e-24!40;UBERON:0002780!8.32e-24!39;UBERON:0001890!8.32e-24!39;UBERON:0006240!8.32e-24!39;UBERON:0002020!2.60e-22!34;UBERON:0002791!4.77e-19!29;UBERON:0003528!4.77e-19!29;UBERON:0001893!4.77e-19!29;UBERON:0007811!6.21e-16!86;UBERON:0000956!5.69e-14!21;UBERON:0001869!5.69e-14!21;UBERON:0000203!5.69e-14!21;UBERON:0000153!2.83e-12!94;UBERON:0002619!7.04e-12!17;UBERON:0002021!2.04e-08!10;UBERON:0000411!2.04e-08!10;UBERON:0001950!2.04e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.18e-46,73;UBERON:0001016,1.04e-45,75;UBERON:0002346,9.59e-43,64;UBERON:0003075,9.59e-43,64;UBERON:0007284,9.59e-43,64;UBERON:0004121,7.92e-41,95;UBERON:0000924,7.92e-41,95;UBERON:0006601,7.92e-41,95;UBERON:0000073,6.18e-40,54;UBERON:0001049,5.97e-38,52;UBERON:0005068,5.97e-38,52;UBERON:0006241,5.97e-38,52;UBERON:0007135,5.97e-38,52;UBERON:0010371,1.75e-34,73;UBERON:0000955,1.71e-33,47;UBERON:0006238,1.71e-33,47;UBERON:0003056,9.43e-33,49;UBERON:0002616,1.35e-32,46;UBERON:0003080,1.09e-29,40;UBERON:0002780,8.82e-29,39;UBERON:0001890,8.82e-29,39;UBERON:0006240,8.82e-29,39;UBERON:0002020,5.31e-28,34;UBERON:0010314,4.32e-26,92;UBERON:0003528,7.75e-24,29;UBERON:0002791,7.75e-24,29;UBERON:0001893,7.75e-24,29;UBERON:0000956,2.31e-17,21;UBERON:0001869,2.31e-17,21;UBERON:0000203,2.31e-17,21;UBERON:0002619,1.07e-14,17;UBERON:0002021,2.71e-10,10;UBERON:0000411,2.71e-10,10;UBERON:0001950,2.71e-10,10;UBERON:0003076,2.29e-08,12;UBERON:0003057,2.29e-08,12;UBERON:0000025,2.32e-08,114;UBERON:0002420,1.43e-07,8;UBERON:0007245,1.43e-07,8;UBERON:0010009,1.43e-07,8;UBERON:0010011,1.43e-07,8;UBERON:0000454,1.43e-07,8;UBERON:0004111,8.71e-07,122|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63634199468316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.79655344036982,2.19686182734472,1.74986909166855,1.53985063787899,0,0,0,0,0.257259436035947,0,0,12.3413041124355,14.8117474196169,21.5502677192101,0.338844532069132,0,0,0,0,0.299600110518405,1.15265491596466,9.22837549545451,9.04539786822327,9.25429829946081,17.424710048632,11.7060326704355,9.55428233876641,11.7889929352431,15.6267193723704,11.0115880999389,15.3224805702225,15.8214729253931,13.3205150607496,16.0103376304217,9.37644067002168,18.7052609330925,10.1297269805702,12.835052813252,10.0173719061047,10.2507610175354,15.4711540034999,0.681535739998656,1.36028808192214,0,0,0,0,0,0,0.983110940922263,0,0,0,0.845060518660083,0,0,0,0,0,0,0.79928715803342,0,1.33597925158342,0.520455980298408,1.21786191324856,0.230615497256059,1.65794904607885,1.76383060703557,0.125666591329675,0,0.144599356919912,0,0,0,0,0,7.02673912827713,11.51956887474,0,0,0,0,13.6309481858389,12.8100168789215,11.5602003943835,13.0368240144207,16.1100738118108,12.6750707181332,15.0884374653015,0.101839363850316,0.373220911830279,5.05445516867349,1.89397670297827,0.910843100738926,2.06911893990126,2.52086981727489,1.50704817835715,2.72145996605311,3.33095672740609,4.59138450342671,5.95017752699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.3466752678997,9.15851050175631,0,0.264450566663544,0.639864751605702,0.928946687441754,0.644337306610467,0.605050573870028,0.444756087689741,0.380451252225118,0,0.658795818896044,0,0,0.779856348476481,0,0.216138049874694,0.398282546508734,0.189667900953082,0.228497025219458,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,16.6972613587304,13.244920584919,0,0,1.57754109708128,1.56175497718655,2.58508077279359,1.43381278771531,1.55959071857676,1.41538265394416,2.02405350837447,4.67609372658099,2.37172666767914,13.1741739732941,1.13552068166615,0.712262414669021,0.488660878060728,1.97964147567043,0,0.728341908464944,0,0.188605079755898,0,1.53717573971964,0.516856586336442,0.727067458955011,0,0.948110273807448,0,0,18.7241783164583,0.900305470156551,1.81102157295856,2.14337035031592,5.49754724291048,6.59964625127661,3.78462747384878,11.2652031172402,0,0.63549621259146,0.441056796109924,0.32977250588296,0,0,0.119372344003136,0,0.291480836629851,12.7943458387252,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.432021363287205,0.209088296014469,0.436725127492355,0.134864346384821,0.247960367176008,0,0.129614973291793,0,0,0.299033092087958,0.165458490457098,0,0.129159823477731,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0.0762068066549998,0.201652370273681,0,0,0,0,0,0,0,0.772758376128762,0,1.64836461840539,0.214368379079066,0,14.6835479080437,19.7939851698086,17.7597609166213,21.4816477929609,19.182310553578,16.6186657425734,14.1754725048679,13.5096360967266,8.15656336171568,19.1571315348173,1.24544817101012,1.19707462020309,2.21953687480374,1.94485373654635,1.46729213839588,1.10306105070008,1.33348036680969,2.67845574410562,2.56735367673452,0.252697211763798,2.5347929989024,0.754505365544305,1.77918864192777,1.98477972455095,1.32101578597911,0.952587382566147,1.97003354106254,2.12200142510076,1.23625770240992,1.91358596174717,1.37147700954166,1.4198064492747,1.66905332963125,1.16277133305863,2.07040636913727,1.69229215783353,1.09756783723664,1.05227884575137,1.22223702461276,1.68342681497322,2.25406534435931,1.47756723563345,2.45538625901814,1.85924209423159,1.15743966588685,2.24829520144151,1.63752125911786,1.28922632428979,0.191288332068843,0.441182838239031,0.927471342481686|short_description=p3@Ap3b2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:11775 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=22bp_to_ENSMUST00000152355_5end | |||
|cluster_id=chr7:88638553..88638569,- | |||
|description=CAGE_peak_3_at_Ap3b2_5end | |||
|id=chr7:88638553..88638569,- | |||
|ontology_enrichment_celltype=CL:0000540!1.90e-17!33;CL:0000047!1.90e-17!33;CL:0000031!1.90e-17!33;CL:0000404!1.90e-17!33;CL:0000221!4.67e-17!44;CL:0000133!4.67e-17!44;CL:0002319!5.29e-17!43;CL:0000117!2.39e-15!23;CL:0000337!2.39e-15!23;CL:0000393!6.82e-13!39;CL:0000211!6.82e-13!39;CL:0000055!1.40e-12!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.29e-21,33;CL:0000047,5.29e-21,33;CL:0000031,5.29e-21,33;CL:0000404,5.29e-21,33;CL:0002319,1.59e-19,43;CL:0000117,4.06e-19,23;CL:0000337,4.06e-19,23;CL:0000221,9.23e-19,44;CL:0000133,9.23e-19,44;CL:0000393,7.08e-16,39;CL:0000211,7.08e-16,39;CL:0002321,3.67e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.08e-38!75;UBERON:0001016!1.08e-38!75;UBERON:0001017!1.90e-38!73;UBERON:0005743!1.90e-38!73;UBERON:0004121!1.35e-36!102;UBERON:0000924!1.35e-36!102;UBERON:0006601!1.35e-36!102;UBERON:0002346!7.89e-36!71;UBERON:0003075!7.89e-36!71;UBERON:0007284!7.89e-36!71;UBERON:0000033!9.30e-31!63;UBERON:0001049!9.32e-31!52;UBERON:0005068!9.32e-31!52;UBERON:0006241!9.32e-31!52;UBERON:0007135!9.32e-31!52;UBERON:0000955!1.84e-29!50;UBERON:0006238!1.84e-29!50;UBERON:0002616!9.64e-29!49;UBERON:0003056!9.18e-28!49;UBERON:0003080!1.60e-24!40;UBERON:0002780!8.32e-24!39;UBERON:0001890!8.32e-24!39;UBERON:0006240!8.32e-24!39;UBERON:0002020!2.60e-22!34;UBERON:0002791!4.77e-19!29;UBERON:0003528!4.77e-19!29;UBERON:0001893!4.77e-19!29;UBERON:0007811!6.21e-16!86;UBERON:0000956!5.69e-14!21;UBERON:0001869!5.69e-14!21;UBERON:0000203!5.69e-14!21;UBERON:0000153!2.83e-12!94;UBERON:0002619!7.04e-12!17;UBERON:0002021!2.04e-08!10;UBERON:0000411!2.04e-08!10;UBERON:0001950!2.04e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.18e-46,73;UBERON:0001016,1.04e-45,75;UBERON:0002346,9.59e-43,64;UBERON:0003075,9.59e-43,64;UBERON:0007284,9.59e-43,64;UBERON:0004121,7.92e-41,95;UBERON:0000924,7.92e-41,95;UBERON:0006601,7.92e-41,95;UBERON:0000073,6.18e-40,54;UBERON:0001049,5.97e-38,52;UBERON:0005068,5.97e-38,52;UBERON:0006241,5.97e-38,52;UBERON:0007135,5.97e-38,52;UBERON:0010371,1.75e-34,73;UBERON:0000955,1.71e-33,47;UBERON:0006238,1.71e-33,47;UBERON:0003056,9.43e-33,49;UBERON:0002616,1.35e-32,46;UBERON:0003080,1.09e-29,40;UBERON:0002780,8.82e-29,39;UBERON:0001890,8.82e-29,39;UBERON:0006240,8.82e-29,39;UBERON:0002020,5.31e-28,34;UBERON:0010314,4.32e-26,92;UBERON:0003528,7.75e-24,29;UBERON:0002791,7.75e-24,29;UBERON:0001893,7.75e-24,29;UBERON:0000956,2.31e-17,21;UBERON:0001869,2.31e-17,21;UBERON:0000203,2.31e-17,21;UBERON:0002619,1.07e-14,17;UBERON:0002021,2.71e-10,10;UBERON:0000411,2.71e-10,10;UBERON:0001950,2.71e-10,10;UBERON:0003076,2.29e-08,12;UBERON:0003057,2.29e-08,12;UBERON:0000025,2.32e-08,114;UBERON:0002420,1.43e-07,8;UBERON:0007245,1.43e-07,8;UBERON:0010009,1.43e-07,8;UBERON:0010011,1.43e-07,8;UBERON:0000454,1.43e-07,8;UBERON:0004111,8.71e-07,122 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63634199468316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.79655344036982,2.19686182734472,1.74986909166855,1.53985063787899,0,0,0,0,0.257259436035947,0,0,12.3413041124355,14.8117474196169,21.5502677192101,0.338844532069132,0,0,0,0,0.299600110518405,1.15265491596466,9.22837549545451,9.04539786822327,9.25429829946081,17.424710048632,11.7060326704355,9.55428233876641,11.7889929352431,15.6267193723704,11.0115880999389,15.3224805702225,15.8214729253931,13.3205150607496,16.0103376304217,9.37644067002168,18.7052609330925,10.1297269805702,12.835052813252,10.0173719061047,10.2507610175354,15.4711540034999,0.681535739998656,1.36028808192214,0,0,0,0,0,0,0.983110940922263,0,0,0,0.845060518660083,0,0,0,0,0,0,0.79928715803342,0,1.33597925158342,0.520455980298408,1.21786191324856,0.230615497256059,1.65794904607885,1.76383060703557,0.125666591329675,0,0.144599356919912,0,0,0,0,0,7.02673912827713,11.51956887474,0,0,0,0,13.6309481858389,12.8100168789215,11.5602003943835,13.0368240144207,16.1100738118108,12.6750707181332,15.0884374653015,0.101839363850316,0.373220911830279,5.05445516867349,1.89397670297827,0.910843100738926,2.06911893990126,2.52086981727489,1.50704817835715,2.72145996605311,3.33095672740609,4.59138450342671,5.95017752699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.3466752678997,9.15851050175631,0,0.264450566663544,0.639864751605702,0.928946687441754,0.644337306610467,0.605050573870028,0.444756087689741,0.380451252225118,0,0.658795818896044,0,0,0.779856348476481,0,0.216138049874694,0.398282546508734,0.189667900953082,0.228497025219458,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,16.6972613587304,13.244920584919,0,0,1.57754109708128,1.56175497718655,2.58508077279359,1.43381278771531,1.55959071857676,1.41538265394416,2.02405350837447,4.67609372658099,2.37172666767914,13.1741739732941,1.13552068166615,0.712262414669021,0.488660878060728,1.97964147567043,0,0.728341908464944,0,0.188605079755898,0,1.53717573971964,0.516856586336442,0.727067458955011,0,0.948110273807448,0,0,18.7241783164583,0.900305470156551,1.81102157295856,2.14337035031592,5.49754724291048,6.59964625127661,3.78462747384878,11.2652031172402,0,0.63549621259146,0.441056796109924,0.32977250588296,0,0,0.119372344003136,0,0.291480836629851,12.7943458387252,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.432021363287205,0.209088296014469,0.436725127492355,0.134864346384821,0.247960367176008,0,0.129614973291793,0,0,0.299033092087958,0.165458490457098,0,0.129159823477731,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0.0762068066549998,0.201652370273681,0,0,0,0,0,0,0,0.772758376128762,0,1.64836461840539,0.214368379079066,0,14.6835479080437,19.7939851698086,17.7597609166213,21.4816477929609,19.182310553578,16.6186657425734,14.1754725048679,13.5096360967266,8.15656336171568,19.1571315348173,1.24544817101012,1.19707462020309,2.21953687480374,1.94485373654635,1.46729213839588,1.10306105070008,1.33348036680969,2.67845574410562,2.56735367673452,0.252697211763798,2.5347929989024,0.754505365544305,1.77918864192777,1.98477972455095,1.32101578597911,0.952587382566147,1.97003354106254,2.12200142510076,1.23625770240992,1.91358596174717,1.37147700954166,1.4198064492747,1.66905332963125,1.16277133305863,2.07040636913727,1.69229215783353,1.09756783723664,1.05227884575137,1.22223702461276,1.68342681497322,2.25406534435931,1.47756723563345,2.45538625901814,1.85924209423159,1.15743966588685,2.24829520144151,1.63752125911786,1.28922632428979,0.191288332068843,0.441182838239031,0.927471342481686 | |||
|short_description=p3@Ap3b2 | |||
}} |
Revision as of 16:22, 5 August 2015
Short description: | p3@Ap3b2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ap3b2_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 22bp_to_ENSMUST00000152355_5end |
EntrezGene: | 11775 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.29e-21 | 33 |
neuronal stem cell | 5.29e-21 | 33 |
neuroblast | 5.29e-21 | 33 |
electrically signaling cell | 5.29e-21 | 33 |
neural cell | 1.59e-19 | 43 |
CNS neuron (sensu Vertebrata) | 4.06e-19 | 23 |
neuroblast (sensu Vertebrata) | 4.06e-19 | 23 |
ectodermal cell | 9.23e-19 | 44 |
neurectodermal cell | 9.23e-19 | 44 |
electrically responsive cell | 7.08e-16 | 39 |
electrically active cell | 7.08e-16 | 39 |
embryonic cell | 3.67e-07 | 70 |