FFCP PHASE1:Mm9::chr8:108089885..108089971,-: Difference between revisions
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{{FFCP|EntrezGene=11972|HGNC=|MCL_coexpression_id=247|UniProt=P51863|association_with_transcript=0bp_to_ENSMUST00000013304,NM_013477,uc009ndg.1_5end|description=CAGE_peak_1_at_Atp6v0d1_5end|id=chr8:108089885..108089971,-|ontology_enrichment_celltype=CL:0000055!3.36e-18!50;CL:0002319!1.79e-16!43;CL:0000221!2.09e-16!44;CL:0000133!2.09e-16!44;CL:0000393!2.98e-13!39;CL:0000211!2.98e-13!39;CL:0000540!1.07e-11!33;CL:0000047!1.07e-11!33;CL:0000031!1.07e-11!33;CL:0000404!1.07e-11!33;CL:0000117!3.17e-11!23;CL:0000337!3.17e-11!23;CL:0002321!5.71e-10!70;CL:0000220!5.71e-10!70|ontology_enrichment_celltype_v019_2=CL:0002319,1.79e-16,43;CL:0000221,2.09e-16,44;CL:0000133,2.09e-16,44;CL:0000393,2.98e-13,39;CL:0000211,2.98e-13,39;CL:0000540,1.07e-11,33;CL:0000047,1.07e-11,33;CL:0000031,1.07e-11,33;CL:0000404,1.07e-11,33;CL:0000117,3.17e-11,23;CL:0000337,3.17e-11,23;CL:0002321,5.71e-10,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!5.07e-29!75;UBERON:0001016!5.07e-29!75;UBERON:0001017!6.01e-28!73;UBERON:0005743!6.01e-28!73;UBERON:0004121!9.81e-28!102;UBERON:0000924!9.81e-28!102;UBERON:0006601!9.81e-28!102;UBERON:0001049!1.67e-20!52;UBERON:0005068!1.67e-20!52;UBERON:0006241!1.67e-20!52;UBERON:0007135!1.67e-20!52;UBERON:0000955!1.83e-19!50;UBERON:0006238!1.83e-19!50;UBERON:0000033!2.28e-19!63;UBERON:0002346!2.69e-19!71;UBERON:0003075!2.69e-19!71;UBERON:0007284!2.69e-19!71;UBERON:0002616!5.23e-19!49;UBERON:0002020!9.54e-16!34;UBERON:0003056!1.04e-14!49;UBERON:0003080!1.46e-14!40;UBERON:0002780!4.92e-14!39;UBERON:0001890!4.92e-14!39;UBERON:0006240!4.92e-14!39;UBERON:0002791!3.31e-13!29;UBERON:0003528!3.31e-13!29;UBERON:0001893!3.31e-13!29;UBERON:0000956!1.25e-09!21;UBERON:0001869!1.25e-09!21;UBERON:0000203!1.25e-09!21;UBERON:0004111!1.86e-09!122;UBERON:0000025!7.78e-09!114;UBERON:0002619!2.76e-08!17;UBERON:0003076!9.40e-07!12;UBERON:0003057!9.40e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.74e-29,95;UBERON:0000924,3.74e-29,95;UBERON:0006601,3.74e-29,95;UBERON:0001016,5.07e-29,75;UBERON:0001017,6.01e-28,73;UBERON:0000073,9.95e-22,54;UBERON:0002346,5.84e-21,64;UBERON:0003075,5.84e-21,64;UBERON:0007284,5.84e-21,64;UBERON:0001049,1.67e-20,52;UBERON:0005068,1.67e-20,52;UBERON:0006241,1.67e-20,52;UBERON:0007135,1.67e-20,52;UBERON:0010371,7.11e-20,73;UBERON:0000955,1.12e-17,47;UBERON:0006238,1.12e-17,47;UBERON:0002616,3.14e-17,46;UBERON:0002020,9.54e-16,34;UBERON:0003056,1.04e-14,49;UBERON:0003080,1.46e-14,40;UBERON:0002780,4.92e-14,39;UBERON:0001890,4.92e-14,39;UBERON:0006240,4.92e-14,39;UBERON:0003528,3.31e-13,29;UBERON:0002791,3.31e-13,29;UBERON:0001893,3.31e-13,29;UBERON:0010314,3.09e-11,92;UBERON:0000956,1.25e-09,21;UBERON:0001869,1.25e-09,21;UBERON:0000203,1.25e-09,21;UBERON:0004111,1.86e-09,122;UBERON:0000025,7.78e-09,114;UBERON:0002619,2.76e-08,17;UBERON:0011216,5.22e-07,194;UBERON:0003076,9.40e-07,12;UBERON:0003057,9.40e-07,12|phase1_expression=46.1228679661807,56.5340160375765,61.8798965569769,32.6661348211376,40.0716583957078,24.5103736991359,29.9024179962273,23.8878148366916,19.006477490475,11.9372908424217,3.5955773327356,3.90883579077148,19.6880839420887,22.7293046289393,35.9758542760916,32.8009933171518,58.7631977627643,38.9595774217424,35.3755238702806,33.9511721438424,54.0875325360804,53.4185317460763,51.7175582495092,35.9982951285165,35.099620003277,59.7201242679621,44.3684856043847,41.8014191410625,41.9951756998586,40.3248207615889,43.2374495777844,31.1165029995219,34.4436281047359,15.8481681015439,11.554064790051,16.1247605997738,11.4334839506927,139.37103303539,135.952349947141,118.839889882052,184.116455753707,157.100461540442,166.530051089686,62.0671312619596,65.6922514302454,52.3108243660792,120.488267029598,78.9251066097216,98.1997236823089,87.6878844825018,66.4935502720472,120.752154066576,46.1402166658775,27.5637613964311,21.5100031451177,83.0947978396109,87.106165741382,83.0232068566682,89.6261921608018,104.21122291659,108.385169999557,108.769094794191,141.397872581671,186.72919133589,172.062747086654,202.486832759639,125.532446307212,139.855463137046,73.6196247390191,73.8482482674348,75.9273110478489,144.539398108325,121.698566064339,70.3097187493836,65.270765763419,80.8912532216818,102.407769329431,120.664534490502,123.960472337788,84.8028830105146,88.651526650735,70.3233050251626,145.454342479719,122.119486376875,129.725712362512,96.9328046208367,91.1178757114259,81.4565578256563,96.3994441131433,90.0812996472883,24.3486170509409,55.0671281268087,66.6371907033596,68.5423053380028,69.5260766669006,70.788248161379,49.4364358863767,66.9791167731767,65.4660731599229,68.547877455006,50.1402574404983,50.047326191584,30.5766287647975,49.7746692207332,16.0203370348298,16.4683912558814,20.2209778005913,47.3863100834099,35.4744900596625,48.0952530570032,43.371331691534,44.4519598335726,45.2006374621875,40.0922223869976,36.3349105049328,43.1036408260787,99.866766964687,30.5104643101014,37.1536431818947,37.0446086379567,34.4512768798214,37.82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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:11972 | |||
|HGNC= | |||
|MCL_coexpression_id=247 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P51863 | |||
|association_with_transcript=0bp_to_ENSMUST00000013304,NM_013477,uc009ndg.1_5end | |||
|cluster_id=chr8:108089885..108089971,- | |||
|description=CAGE_peak_1_at_Atp6v0d1_5end | |||
|id=chr8:108089885..108089971,- | |||
|ontology_enrichment_celltype=CL:0000055!3.36e-18!50;CL:0002319!1.79e-16!43;CL:0000221!2.09e-16!44;CL:0000133!2.09e-16!44;CL:0000393!2.98e-13!39;CL:0000211!2.98e-13!39;CL:0000540!1.07e-11!33;CL:0000047!1.07e-11!33;CL:0000031!1.07e-11!33;CL:0000404!1.07e-11!33;CL:0000117!3.17e-11!23;CL:0000337!3.17e-11!23;CL:0002321!5.71e-10!70;CL:0000220!5.71e-10!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.79e-16,43;CL:0000221,2.09e-16,44;CL:0000133,2.09e-16,44;CL:0000393,2.98e-13,39;CL:0000211,2.98e-13,39;CL:0000540,1.07e-11,33;CL:0000047,1.07e-11,33;CL:0000031,1.07e-11,33;CL:0000404,1.07e-11,33;CL:0000117,3.17e-11,23;CL:0000337,3.17e-11,23;CL:0002321,5.71e-10,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.07e-29!75;UBERON:0001016!5.07e-29!75;UBERON:0001017!6.01e-28!73;UBERON:0005743!6.01e-28!73;UBERON:0004121!9.81e-28!102;UBERON:0000924!9.81e-28!102;UBERON:0006601!9.81e-28!102;UBERON:0001049!1.67e-20!52;UBERON:0005068!1.67e-20!52;UBERON:0006241!1.67e-20!52;UBERON:0007135!1.67e-20!52;UBERON:0000955!1.83e-19!50;UBERON:0006238!1.83e-19!50;UBERON:0000033!2.28e-19!63;UBERON:0002346!2.69e-19!71;UBERON:0003075!2.69e-19!71;UBERON:0007284!2.69e-19!71;UBERON:0002616!5.23e-19!49;UBERON:0002020!9.54e-16!34;UBERON:0003056!1.04e-14!49;UBERON:0003080!1.46e-14!40;UBERON:0002780!4.92e-14!39;UBERON:0001890!4.92e-14!39;UBERON:0006240!4.92e-14!39;UBERON:0002791!3.31e-13!29;UBERON:0003528!3.31e-13!29;UBERON:0001893!3.31e-13!29;UBERON:0000956!1.25e-09!21;UBERON:0001869!1.25e-09!21;UBERON:0000203!1.25e-09!21;UBERON:0004111!1.86e-09!122;UBERON:0000025!7.78e-09!114;UBERON:0002619!2.76e-08!17;UBERON:0003076!9.40e-07!12;UBERON:0003057!9.40e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.74e-29,95;UBERON:0000924,3.74e-29,95;UBERON:0006601,3.74e-29,95;UBERON:0001016,5.07e-29,75;UBERON:0001017,6.01e-28,73;UBERON:0000073,9.95e-22,54;UBERON:0002346,5.84e-21,64;UBERON:0003075,5.84e-21,64;UBERON:0007284,5.84e-21,64;UBERON:0001049,1.67e-20,52;UBERON:0005068,1.67e-20,52;UBERON:0006241,1.67e-20,52;UBERON:0007135,1.67e-20,52;UBERON:0010371,7.11e-20,73;UBERON:0000955,1.12e-17,47;UBERON:0006238,1.12e-17,47;UBERON:0002616,3.14e-17,46;UBERON:0002020,9.54e-16,34;UBERON:0003056,1.04e-14,49;UBERON:0003080,1.46e-14,40;UBERON:0002780,4.92e-14,39;UBERON:0001890,4.92e-14,39;UBERON:0006240,4.92e-14,39;UBERON:0003528,3.31e-13,29;UBERON:0002791,3.31e-13,29;UBERON:0001893,3.31e-13,29;UBERON:0010314,3.09e-11,92;UBERON:0000956,1.25e-09,21;UBERON:0001869,1.25e-09,21;UBERON:0000203,1.25e-09,21;UBERON:0004111,1.86e-09,122;UBERON:0000025,7.78e-09,114;UBERON:0002619,2.76e-08,17;UBERON:0011216,5.22e-07,194;UBERON:0003076,9.40e-07,12;UBERON:0003057,9.40e-07,12 | |||
|phase1_expression=46.1228679661807,56.5340160375765,61.8798965569769,32.6661348211376,40.0716583957078,24.5103736991359,29.9024179962273,23.8878148366916,19.006477490475,11.9372908424217,3.5955773327356,3.90883579077148,19.6880839420887,22.7293046289393,35.9758542760916,32.8009933171518,58.7631977627643,38.9595774217424,35.3755238702806,33.9511721438424,54.0875325360804,53.4185317460763,51.7175582495092,35.9982951285165,35.099620003277,59.7201242679621,44.3684856043847,41.8014191410625,41.9951756998586,40.3248207615889,43.2374495777844,31.1165029995219,34.4436281047359,15.8481681015439,11.554064790051,16.1247605997738,11.4334839506927,139.37103303539,135.952349947141,118.839889882052,184.116455753707,157.100461540442,166.530051089686,62.0671312619596,65.6922514302454,52.3108243660792,120.488267029598,78.9251066097216,98.1997236823089,87.6878844825018,66.4935502720472,120.752154066576,46.1402166658775,27.5637613964311,21.5100031451177,83.0947978396109,87.106165741382,83.0232068566682,89.6261921608018,104.21122291659,108.385169999557,108.769094794191,141.397872581671,186.72919133589,172.062747086654,202.486832759639,125.532446307212,139.855463137046,73.6196247390191,73.8482482674348,75.9273110478489,144.539398108325,121.698566064339,70.3097187493836,65.270765763419,80.8912532216818,102.407769329431,120.664534490502,123.960472337788,84.8028830105146,88.651526650735,70.3233050251626,145.454342479719,122.119486376875,129.725712362512,96.9328046208367,91.1178757114259,81.4565578256563,96.3994441131433,90.0812996472883,24.3486170509409,55.0671281268087,66.6371907033596,68.5423053380028,69.5260766669006,70.788248161379,49.4364358863767,66.9791167731767,65.4660731599229,68.547877455006,50.1402574404983,50.047326191584,30.5766287647975,49.7746692207332,16.0203370348298,16.4683912558814,20.2209778005913,47.3863100834099,35.4744900596625,48.0952530570032,43.371331691534,44.4519598335726,45.2006374621875,40.0922223869976,36.3349105049328,43.1036408260787,99.866766964687,30.5104643101014,37.1536431818947,37.0446086379567,34.4512768798214,37.8202697445473,52.1896931410742,62.069528966448,84.8259162594493,43.1722423302519,26.2395122667965,23.9961092397363,31.7675567682662,106.051772698614,81.4351073017155,80.9214027606847,100.991930031713,113.281947597336,108.46535926009,97.0202753145191,40.1247093570246,41.427521213161,63.9388578837197,95.9614862842321,37.8650489021468,46.670127199995,50.9575827349138,47.1706079825788,52.3881043465224,51.7579429950793,62.9675589041378,61.8301056066247,34.7064468621876,19.856138417621,26.9205219970842,36.605687315405,30.3071501655902,37.611233984394,45.6836342825634,26.6705917536781,35.812872552975,31.3964446679953,46.034486902086,36.0398844211773,27.4395490177883,30.9706745712946,29.5930919481513,28.1372851398787,26.6882105295164,25.8112678672953,28.4369805483596,30.8260503849327,26.9878153858108,34.47516745661,30.4008035796959,37.8657967431611,32.0543168324934,29.7938249648025,92.527577368216,68.1228533950863,52.5365864944239,34.9074747995878,29.6470668243975,29.7262939981361,28.6085764135047,48.6057294342256,61.821096188874,75.3293479405734,45.5547899082731,71.9734432143928,58.5611036504628,73.0170252391024,64.7280769235479,30.5598598942435,38.0402967779462,43.0145150229433,42.6752777144434,32.6750746063824,33.8123207019241,35.8426337007753,45.9667394587273,44.7466530900232,48.2494778258083,52.8444329766976,56.9905382064191,60.9581989773695,50.9898518589896,34.2032466717993,34.7909421350369,34.6287653072675,37.93484269965,38.1059912408819,40.4855104332458,40.5651553805643,37.7775078385832,37.065790780391,129.391385874619,45.7733365632259,43.0611988898094,40.665199349485,52.2046473348764,62.2352142558744,48.4053358236504,31.8345571774414,34.7115399821515,30.2146252679835,34.0300860018328,47.0692583411502,46.6565536136587,61.076831779491,36.0984480003177,46.7290495158915,50.8660712017384,51.9446707648889,54.2230843058912,52.3629592065072,73.8877291302434,79.4102298375316,52.1270129400178,62.3617046648695,123.142302520636,103.380707574323,34.5902734744785,27.5193310652767,53.6363973007636,57.0040566673092,54.5021196263981,59.742199488138,59.932843328164,52.6522347267228,56.2686875328103,68.0956148933357,58.5025911360855,90.2912899145278,37.6141225801912,46.6531881608209,42.8392703099905,43.3871423417768,29.2039304347918,32.5326052447675,27.5114436837923,32.2514686382586,48.4295104324467,39.0442637888788,42.3822400795883,26.9014959813354,31.0152719194708,42.0328888054635,43.2216295157495,43.3169281642385,69.7901191795265,35.8321577122307,46.0516914266606,45.4394514266976,55.3301528963894,58.5049721734791,61.212235663989,84.9457208029732,57.0252250594816,80.9198510699793,70.7896157756428,26.2169142176953,42.9495375011109,46.0790746451111,56.1050016814741,51.5402425199492,49.8432230637045,118.115917380695,37.9333355371233,39.8326655169019,38.8908507476395,38.8039021429663,40.8715740885865,46.2131909877176,28.7263546689615,29.6697078926155,28.1927946561025,43.9148484286952,28.3120714255116,33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| |||
|short_description=p1@Atp6v0d1 | |||
}} |
Revision as of 19:59, 5 August 2015
Short description: | p1@Atp6v0d1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Atp6v0d1_5end |
Coexpression cluster: | MCL_coexpression_mm9:247 |
Association with transcript: | 0bp_to_ENSMUST00000013304, NM_013477, uc009ndg.1_5end |
EntrezGene: | 11972 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.79e-16 | 43 |
ectodermal cell | 2.09e-16 | 44 |
neurectodermal cell | 2.09e-16 | 44 |
electrically responsive cell | 2.98e-13 | 39 |
electrically active cell | 2.98e-13 | 39 |
neuron | 1.07e-11 | 33 |
neuronal stem cell | 1.07e-11 | 33 |
neuroblast | 1.07e-11 | 33 |
electrically signaling cell | 1.07e-11 | 33 |
CNS neuron (sensu Vertebrata) | 3.17e-11 | 23 |
neuroblast (sensu Vertebrata) | 3.17e-11 | 23 |
embryonic cell | 5.71e-10 | 70 |