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FFCP PHASE1:Mm9::chr13:24923530..24923556,+: Difference between revisions

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{{FFCP|EntrezGene=56196|HGNC=|MCL_coexpression_id=88|UniProt=Q9JJX7|association_with_transcript=0bp_to_ENSMUST00000038039,uc007pwk.1_5end|description=CAGE_peak_1_at_Tdp2_5end|id=chr13:24923530..24923556,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003929!1.44e-08!55;UBERON:0000344!3.62e-08!15;UBERON:0000160!3.62e-08!43;UBERON:0001007!8.31e-08!128;UBERON:0001555!8.31e-08!128;UBERON:0007026!8.31e-08!128;UBERON:0004119!1.38e-07!130;UBERON:0000925!1.38e-07!130;UBERON:0006595!1.38e-07!130;UBERON:0001242!1.62e-07!13;UBERON:0000060!1.62e-07!13;UBERON:0001262!1.62e-07!13;UBERON:0004786!1.62e-07!13;UBERON:0004921!2.84e-07!126;UBERON:0004185!2.84e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.13e-12,31;UBERON:0001007,2.63e-09,116;UBERON:0001555,2.63e-09,116;UBERON:0007026,2.63e-09,116;UBERON:0004119,4.88e-09,118;UBERON:0000925,4.88e-09,118;UBERON:0006595,4.88e-09,118;UBERON:0004921,1.02e-08,114;UBERON:0003929,1.44e-08,55;UBERON:0005409,1.51e-08,47;UBERON:0000344,3.62e-08,15;UBERON:0001242,1.62e-07,13;UBERON:0001262,1.62e-07,13;UBERON:0004786,1.62e-07,13|phase1_expression=23.7020293715095,45.0178275854776,42.7699285026164,117.053649775743,135.74274281546,24.6782529710478,23.127651418957,20.7888550740938,29.8472090961533,25.2789688427753,12.6701296486874,11.9658238493005,19.0032810223638,19.9318517515314,13.9906099962578,13.970793449898,17.4890469532037,11.5143690355757,13.7114433605739,11.8829102503448,15.3077922271926,22.539045922601,24.5527801790599,24.1588558418044,18.5821517664408,32.1569899904411,30.5841017272943,24.7791917588772,21.4726463985703,25.2030129759931,14.4124831925948,10.7955214488137,8.61090702618398,31.6963362030877,23.3969811998532,25.4339007398493,21.4377824075488,8.78916424547506,14.8453715459522,12.5645698553712,11.1763982725893,4.78131839470912,13.1087795318411,6.42073771675444,8.00877756634165,12.664725899156,5.47673941043627,5.66865406589161,5.05278220289285,6.41618666945135,6.57936181639204,1.43752564364972,30.2008690903925,29.7398478224651,26.2153163331122,7.97504251711436,9.45560351797897,11.3447860301037,9.71119012126069,2.64495489636016,3.80298842103708,3.38844532069132,8.00365316500025,2.6996991518442,2.96659908770092,4.9733608046227,2.69640099466564,3.84218305321555,13.0648911508682,9.72042755988173,12.6194976810829,7.42692559449889,8.1721360152097,12.3715707207104,13.9934387686625,10.1114066527102,8.8092704799511,13.5348578370299,10.5988507946808,9.89147157976454,9.88066550906024,5.2091337055676,8.37548997004143,6.19038871034848,11.7654650788144,6.18720029494702,9.681274294339,8.20157561631323,9.54150035998119,10.9578762154839,22.0297011413275,26.673140186423,25.8389106808945,18.3499085156858,11.0461990966104,15.2329141613094,13.7635531729117,10.5666799998396,9.87186817490901,9.89350808628953,13.5209682985613,16.6824420638613,12.7402619853323,7.11066703153331,17.5357743219083,15.454951793981,10.6160133453104,18.2694207550496,10.3575153458869,11.4300447079915,12.4909435271618,7.91610243611567,12.4532368518272,13.1128697280782,13.1699351991989,9.42499434972566,8.89901883843746,8.96516012903452,19.4614321428972,11.9707468961083,13.0296495891632,12.1218813283806,11.1835056730873,19.3235326027621,18.6407569063975,27.3339049073193,22.2856131581012,23.3962065087429,20.8395172399826,10.3355541189328,7.32000964509802,9.42407640846483,9.73416193076748,12.0186264945255,9.14267396062064,8.76102820565891,15.2759045775474,12.3162900903992,10.108910337347,13.2578369208479,14.7036100547855,24.5995251743816,17.4660265911189,17.6324636867787,21.2954242343656,16.1423287558911,14.8985742049969,8.79591460512653,20.2633913356872,20.4234566581245,16.8913079197391,14.6861140726475,13.3462679628287,12.1888258282758,10.2891068203972,24.8792833523116,20.3641824320838,22.9039637332097,22.4489164522518,16.5700618028402,14.3060896588469,11.1638478105829,9.94327889457883,12.3961466000864,9.87309522479221,10.4640275137684,8.85302224618743,10.1585847859437,12.5065485934245,12.148392341853,10.9442892886905,8.04099930839328,9.22110484222413,11.0049263383505,9.88362758251398,11.8340304236177,62.4491499839378,48.9233548327557,13.2238715331845,21.3657738111603,17.0105048945163,22.386871233191,23.5720726475563,23.9684288901825,25.6245693234036,18.1168850196412,17.3421294072186,18.1050389557447,17.9366960149591,24.268124033664,23.7751854862164,37.6377006450754,13.2767530667157,17.4800224292885,19.1603150644237,16.0884548997798,16.4859614092482,16.7624609537861,16.8209188750524,23.3224033807771,24.6488002710958,21.3477093584715,25.4949259294948,15.0160595144485,15.3316016188298,15.9652099793246,13.3887680116412,13.2647437863829,15.0229252551038,13.2340223227373,11.6737363278025,13.453509246216,15.814502718009,20.4677521217677,17.78614736753,30.8146231095476,32.650329260988,16.4030797263545,9.05290631816363,17.4332098828846,18.578007314391,16.4652733201932,14.0814148973101,12.5629693081362,9.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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:56196
|HGNC=
|MCL_coexpression_id=88
|TSSclassifier=NA
|UniProt=uniprot:Q9JJX7
|association_with_transcript=0bp_to_ENSMUST00000038039,uc007pwk.1_5end
|cluster_id=chr13:24923530..24923556,+
|description=CAGE_peak_1_at_Tdp2_5end
|id=chr13:24923530..24923556,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.13e-12,31;UBERON:0001007,2.63e-09,116;UBERON:0001555,2.63e-09,116;UBERON:0007026,2.63e-09,116;UBERON:0004119,4.88e-09,118;UBERON:0000925,4.88e-09,118;UBERON:0006595,4.88e-09,118;UBERON:0004921,1.02e-08,114;UBERON:0003929,1.44e-08,55;UBERON:0005409,1.51e-08,47;UBERON:0000344,3.62e-08,15;UBERON:0001242,1.62e-07,13;UBERON:0001262,1.62e-07,13;UBERON:0004786,1.62e-07,13
|phase1_expression=23.7020293715095,45.0178275854776,42.7699285026164,117.053649775743,135.74274281546,24.6782529710478,23.127651418957,20.7888550740938,29.8472090961533,25.2789688427753,12.6701296486874,11.9658238493005,19.0032810223638,19.9318517515314,13.9906099962578,13.970793449898,17.4890469532037,11.5143690355757,13.7114433605739,11.8829102503448,15.3077922271926,22.539045922601,24.5527801790599,24.1588558418044,18.5821517664408,32.1569899904411,30.5841017272943,24.7791917588772,21.4726463985703,25.2030129759931,14.4124831925948,10.7955214488137,8.61090702618398,31.6963362030877,23.3969811998532,25.4339007398493,21.4377824075488,8.78916424547506,14.8453715459522,12.5645698553712,11.1763982725893,4.78131839470912,13.1087795318411,6.42073771675444,8.00877756634165,12.664725899156,5.47673941043627,5.66865406589161,5.05278220289285,6.41618666945135,6.57936181639204,1.43752564364972,30.2008690903925,29.7398478224651,26.2153163331122,7.97504251711436,9.45560351797897,11.3447860301037,9.71119012126069,2.64495489636016,3.80298842103708,3.38844532069132,8.00365316500025,2.6996991518442,2.96659908770092,4.9733608046227,2.69640099466564,3.84218305321555,13.0648911508682,9.72042755988173,12.6194976810829,7.42692559449889,8.1721360152097,12.3715707207104,13.9934387686625,10.1114066527102,8.8092704799511,13.5348578370299,10.5988507946808,9.89147157976454,9.88066550906024,5.2091337055676,8.37548997004143,6.19038871034848,11.7654650788144,6.18720029494702,9.681274294339,8.20157561631323,9.54150035998119,10.9578762154839,22.0297011413275,26.673140186423,25.8389106808945,18.3499085156858,11.0461990966104,15.2329141613094,13.7635531729117,10.5666799998396,9.87186817490901,9.89350808628953,13.5209682985613,16.6824420638613,12.7402619853323,7.11066703153331,17.5357743219083,15.454951793981,10.6160133453104,18.2694207550496,10.3575153458869,11.4300447079915,12.4909435271618,7.91610243611567,12.4532368518272,13.1128697280782,13.1699351991989,9.42499434972566,8.89901883843746,8.96516012903452,19.4614321428972,11.9707468961083,13.0296495891632,12.1218813283806,11.1835056730873,19.3235326027621,18.6407569063975,27.3339049073193,22.2856131581012,23.3962065087429,20.8395172399826,10.3355541189328,7.32000964509802,9.42407640846483,9.73416193076748,12.0186264945255,9.14267396062064,8.76102820565891,15.2759045775474,12.3162900903992,10.108910337347,13.2578369208479,14.7036100547855,24.5995251743816,17.4660265911189,17.6324636867787,21.2954242343656,16.1423287558911,14.8985742049969,8.79591460512653,20.2633913356872,20.4234566581245,16.8913079197391,14.6861140726475,13.3462679628287,12.1888258282758,10.2891068203972,24.8792833523116,20.3641824320838,22.9039637332097,22.4489164522518,16.5700618028402,14.3060896588469,11.1638478105829,9.94327889457883,12.3961466000864,9.87309522479221,10.4640275137684,8.85302224618743,10.1585847859437,12.5065485934245,12.148392341853,10.9442892886905,8.04099930839328,9.22110484222413,11.0049263383505,9.88362758251398,11.8340304236177,62.4491499839378,48.9233548327557,13.2238715331845,21.3657738111603,17.0105048945163,22.386871233191,23.5720726475563,23.9684288901825,25.6245693234036,18.1168850196412,17.3421294072186,18.1050389557447,17.9366960149591,24.268124033664,23.7751854862164,37.6377006450754,13.2767530667157,17.4800224292885,19.1603150644237,16.0884548997798,16.4859614092482,16.7624609537861,16.8209188750524,23.3224033807771,24.6488002710958,21.3477093584715,25.4949259294948,15.0160595144485,15.3316016188298,15.9652099793246,13.3887680116412,13.2647437863829,15.0229252551038,13.2340223227373,11.6737363278025,13.453509246216,15.814502718009,20.4677521217677,17.78614736753,30.8146231095476,32.650329260988,16.4030797263545,9.05290631816363,17.4332098828846,18.578007314391,16.4652733201932,14.0814148973101,12.5629693081362,9.99783291721258,8.78101415360095,8.98520321405289,11.0732344824387,10.5240147313941,6.71839590334526,7.42545422023351,7.5217510462386,6.03165135757089,3.26343410291226,7.86822836830458,7.17435540392304,9.63303539926752,9.37693492737625,10.4918365041072,9.84636616097055,19.5615096038079,17.9601822376454,17.0184484208911,15.5329718669159,13.8135177931084,13.587673477864,19.4309136803949,12.5670018901864,15.4162233399144,10.9249247583414,11.9229671574946,13.3549202750441,18.8948872850148,8.74341651754438,5.30980553359851,11.8962511715941,12.3952658355548,12.6365403436452,7.38254732201932,11.9899707698132,15.7641258832615,15.2684166380552,14.2598951353889,12.6414703174326,10.5418608574999,13.4076206222643,8.5109901438447,15.665315180724,8.40831444587904,10.9311887866112,12.945837055886,14.4478742257677,12.3411765451591,7.61162372786498,10.3255551548033,13.7690846061483,6.61585194164886,8.73897140589844,9.20347232166662,11.1578911117088,10.2660215842697,9.68431308495861,31.4799303560239,9.45669040253599,12.6444451790411,16.717336305021,12.7784223885101,14.5043711893612,12.7125631780553,10.7525741407066,21.0773253192381,28.5500962740262,25.2905952062096,8.59203556213602,18.1893196309153,16.2655573701479,12.7446302169725,11.4998562807958,10.9181281873089,11.8680624818642,10.2490285099417,13.6113089831695,17.1091764745167,16.776161453347,45.6591280334194,27.959594110224,23.4951056449079,26.4453616147905,14.4659002295059,18.4162176784948,17.6035857968631,25.1294462748824,28.1023043060905,21.0178185118625,23.618460513145,11.3764003426144,12.1635129174099,15.0985107032296,16.6298653411578,17.9026695667481,18.6760473494389,16.3465811347158,18.3135013696476,22.2126189885925,19.35652889037,18.4511918800418,14.2288505880039,19.2423683280659,16.0121355988749,7.9355634265324,21.9766093840324,17.4044881822383,17.124230869136,9.46629010757733,9.00875882165674,6.41030684935428,9.86094543763703,12.0377304968487,6.21227026878773,8.74617949363636,12.0308057822273,8.07709957015332,16.4419804744954,3.7769694869485,7.42524750254986,5.85417564191487,12.6879874515577,11.9084871702919,23.9748772919448,20.7492934168536,16.0489589408886,13.6139761558245,13.4152424081909,14.8913241844511,12.8903102124937,11.743998262617,14.4413644316317,10.6132828940795,11.1530891951705,12.8265912142532,12.0797544636148,13.9574832242615,15.2203992732375,13.8125170472091,14.0220034393275,15.2398284166327,16.071350131329,16.4862790550525,9.94320831917705,14.198064492747,14.5446075867866,11.7730597472186,15.5280477685296,13.8767956942349,14.0854539112035,13.41655528333,13.716215498432,14.0285567914435,14.8293772655218,14.4801589092078,19.6430900721451,13.3245683419931,10.2240503820005,9.49280196164194,15.6734177658424,11.3881658645598,8.41668661102911,9.9266138603782,11.3615239454007
|short_description=p1@Tdp2
}}

Revision as of 20:22, 5 August 2015

Short description:p1@Tdp2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Tdp2_5end
Coexpression cluster:MCL_coexpression_mm9:88
Association with transcript: 0bp_to_ENSMUST00000038039, uc007pwk.1_5end
EntrezGene:56196
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Tdp2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G723.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I545.02
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I642.77
CD326+ enterocyte, pool1.CNhs13542.11848-124I3117.05
CD326+ enterocyte, pool2.CNhs13197.11849-124I4135.74
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I724.68
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I823.13
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E920.79
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E729.85
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F225.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E612.67
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F111.97
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E419.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E819.93
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A113.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A313.97
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A517.49
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A211.51
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A413.71
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A611.88
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A315.31
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H222.54
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I924.55
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D124.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D218.58
GP2+ M cell, pool1.CNhs13228.11845-124H932.16
GP2+ M cell, pool2.CNhs13231.11846-124I130.58
GP2+ M cell, pool3.CNhs13240.11847-124I224.78
Ileum epithelium, pool1.CNhs13199.10252-104B921.47
Ileum epithelium, pool2.CNhs13232.10253-104C125.20
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C814.41
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I310.80
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G68.61
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F523.40
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F625.43
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F721.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G88.79
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H114.85
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H312.56
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G911.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.78
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H413.11
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.42
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D98.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B312.66
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B75.48
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.67
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.05
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.42
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.58
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A230.20
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I929.74
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A126.22
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.98
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E19.46
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C511.34
Mouse Granule cells, donor1.CNhs12131.11713-123C39.71
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.39
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.97
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E83.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D513.06
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.72
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D912.62
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.17
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D212.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F213.99
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D610.11
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F313.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D710.60
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.89
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.88
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.38
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.77
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.19
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.68
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.20
Mouse Schwann, donor1.CNhs12507.11728-123D99.54
Mouse Schwann, donor2.CNhs12573.11746-123F910.96
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G322.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F726.67
Mouse hepatocyte, donor1.CNhs13078.11714-123C425.84
Mouse hepatocyte, donor3.CNhs12615.11637-122C818.35
Mouse hepatocyte, donor6.CNhs13090.11822-124F411.05
Mouse hepatocyte, donor8.CNhs13091.11824-124F615.23
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A713.76
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I710.57
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E39.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I89.89
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G613.52
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H116.68
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G117.54
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G215.45
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G310.62
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B618.27
accessory axillary lymph node, adult.CNhs10475.1063-29H910.36
adrenal gland, adult.CNhs10508.49-24D711.43
adrenal gland, embryo E14.CNhs11038.406-44C512.49
adrenal gland, embryo E16.CNhs11004.1254-43D67.92
adrenal gland, embryo E17.CNhs11043.1263-45I112.45
adrenal gland, embryo E18.CNhs11026.1262-18F513.11
adrenal gland, neonate N00.CNhs11191.1311-23C113.17
adrenal gland, neonate N25.CNhs11223.1377-27I39.42
amnion, adult pregnant day17.5.CNhs10488.583-22A88.90
aorta, adult.CNhs10498.46-23H18.97
bone (os femoris), adult.CNhs10483.56-12G219.46
bone (os femoris), neonate N02.CNhs11227.1985-43F511.97
bone (os femoris), neonate N16.CNhs11225.1525-43A613.03
bone (os femoris), neonate N20.CNhs11195.1350-25C312.12
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B219.32
cerebellum, neonate N30.CNhs11135.1395-42I218.64
colon, adult.CNhs10468.36-18H727.33
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C722.29
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D123.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D420.84
corpora quadrigemina, adult.CNhs10501.16-22A410.34
corpus striatum, adult.CNhs10487.19-21D87.32
corpus striatum, neonate N00.CNhs11226.630-43F19.42
cortex, adult.CNhs10473.12-14D59.73
cortex, neonate N30.CNhs11107.1392-42F212.02
diencephalon, adult.CNhs10482.20-12F29.14
diencephalon, neonate N30.CNhs11201.1388-42B28.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B115.28
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A212.32
epididymis, adult.CNhs10490.58-23B210.11
eyeball, adult.CNhs10484.31-12G413.26
eyeball, embryo E12.CNhs11016.345-16C614.70
eyeball, embryo E14.CNhs10521.399-16E224.60
eyeball, embryo E15.CNhs10593.426-16C917.47
eyeball, embryo E17.CNhs11023.1261-18D417.63
eyeball, neonate N00.CNhs11207.633-15C621.30
eyeball, neonate N01.CNhs11140.1532-43E716.14
eyeball, neonate N02.CNhs11205.1551-44G814.90
eyeball, neonate N16.CNhs11188.777-19A28.80
forelimb, embryo E11.CNhs10596.335-25E220.26
forelimb, embryo E12.CNhs10600.359-14H220.42
forelimb, embryo E13.CNhs10589.384-1E216.89
forelimb, embryo E14.CNhs10577.413-26A814.69
forelimb, embryo E15.CNhs11007.437-20E713.35
forelimb, embryo E17.CNhs10598.1517-43C412.19
forelimb, embryo E18.CNhs11008.1520-43B510.29
gonad, embryo E13.CNhs11044.1564-45I624.88
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C820.36
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D222.90
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D522.45
heart, embryo E11.CNhs10586.331-24E916.57
heart, embryo E12.CNhs11015.353-12F514.31
heart, embryo E13.CNhs11013.376-3I911.16
heart, embryo E14.CNhs10597.403-26D49.94
heart, embryo E15.CNhs11017.431-16C812.40
heart, embryo E16.CNhs11021.457-17C69.87
heart, embryo E17.CNhs11025.479-18E510.46
heart, embryo E18.CNhs11030.1283-20G38.85
heart, neonate N00.CNhs11213.639-21E310.16
heart, neonate N03.CNhs11221.1349-25I212.51
heart, neonate N10.CNhs11118.749-24G112.15
heart, neonate N16.CNhs11209.782-15G110.94
heart, neonate N20.CNhs11127.821-26I68.04
heart, neonate N25.CNhs11196.1351-25D39.22
heart, neonate N30.CNhs11202.1390-42D211.00
hippocampus, adult.CNhs10478.13-16E89.88
hippocampus, neonate N00.CNhs11228.627-43G111.83
intestinal mucosa, adult.CNhs10506.860-29I362.45
intestine, adult.CNhs10496.178-9A348.92
intestine, embryo E12.CNhs11019.1251-16I513.22
intestine, embryo E13.CNhs11010.381-16D521.37
intestine, embryo E15.CNhs10602.976-16D817.01
intestine, embryo E16.CNhs10585.463-22H422.39
intestine, embryo E17.CNhs10582.482-18D323.57
intestine, embryo E18.CNhs10526.1289-20F723.97
intestine, neonate N00.CNhs11126.644-26D125.62
intestine, neonate N01.CNhs11192.1322-23E918.12
intestine, neonate N06.CNhs11102.688-20B817.34
intestine, neonate N07.CNhs11095.720-20F218.11
intestine, neonate N10.CNhs11098.755-23A517.94
intestine, neonate N20.CNhs11187.827-18D124.27
intestine, neonate N25.CNhs11121.1352-25E323.78
intestine, neonate N30.CNhs11131.1384-42G137.64
kidney, embryo E14.CNhs10606.411-4I913.28
kidney, embryo E15.CNhs10997.434-16F817.48
kidney, embryo E16.CNhs10584.464-22A519.16
kidney, embryo E17.CNhs11028.483-18I216.09
kidney, embryo E18.CNhs11001.1288-20C716.49
kidney, neonate N00.CNhs11214.646-21G716.76
kidney, neonate N10.CNhs11206.758-6D516.82
kidney, neonate N20.CNhs11113.832-19I123.32
kidney, neonate N25.CNhs11122.1353-25F324.65
kidney, neonate N30.CNhs11203.1385-42H121.35
liver, adult pregnant day01.CNhs10466.508-5B225.49
liver, embryo E12.CNhs10601.355-15F815.02
liver, embryo E13.CNhs10524.378-3H615.33
liver, embryo E14.CNhs10594.409-16E115.97
liver, embryo E15.CNhs10520.433-16D713.39
liver, embryo E16.CNhs10523.462-17F513.26
liver, embryo E17.CNhs10510.481-18A315.02
liver, embryo E18.CNhs10579.499-43G413.23
liver, neonate N00.CNhs11117.641-24F411.67
liver, neonate N03.CNhs11123.1345-25G213.45
liver, neonate N06.CNhs11101.684-20A815.81
liver, neonate N07.CNhs11103.716-20H220.47
liver, neonate N10.CNhs11115.751-24B917.79
liver, neonate N20.CNhs11220.823-25A330.81
liver, neonate N25.CNhs11198.1368-26H132.65
liver, neonate N30.CNhs11106.1382-42D116.40
lung, adult.CNhs10474.28-22B19.05
lung, embryo E12.CNhs10522.354-16G217.43
lung, embryo E14.CNhs10604.404-26F818.58
lung, embryo E15.CNhs11020.432-17C516.47
lung, embryo E16.CNhs10998.458-17B614.08
lung, embryo E17.CNhs10605.480-44A612.56
lung, embryo E18.CNhs10583.1287-20I610.00
lung, neonate N00.CNhs11224.640-42C68.78
lung, neonate N06.CNhs11212.683-20E58.99
lung, neonate N07.CNhs11111.715-19A311.07
lung, neonate N10.CNhs11219.750-23E610.52
lung, neonate N20.CNhs11109.822-18A46.72
lung, neonate N25.CNhs11119.1359-25C77.43
lung, neonate N30.CNhs11133.1394-42H27.52
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B67.87
mammary gland, adult pregnant day19.CNhs10476.588-5H27.17
medulla oblongata, adult.CNhs10477.17-12C29.63
medulla oblongata, neonate N30.CNhs11200.1396-42A39.38
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C710.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C29.85
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E119.56
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E217.96
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E317.02
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D715.53
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D813.81
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D913.59
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D419.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D512.57
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D615.42
olfactory brain, adult.CNhs10489.18-22I910.92
ovary, adult.CNhs10507.91-2I711.92
ovary, embryo E18.CNhs11040.505-44H713.35
ovary, neonate N00.CNhs11217.1299-22I418.89
oviduct, adult pregnant day01.CNhs10500.988-6G68.74
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F411.90
pancreas, embryo E15.CNhs11042.1556-45F212.40
pancreas, embryo E16.CNhs11003.460-26E512.64
pancreas, embryo E17.CNhs10599.1558-45G37.38
pancreas, embryo E18.CNhs10580.1535-43I711.99
pancreas, neonate N00.CNhs11105.645-26G915.76
pancreas, neonate N01.CNhs11138.1531-43D715.27
pancreas, neonate N02.CNhs11139.1539-43D814.26
pancreas, neonate N16.CNhs11136.787-43B612.64
pancreas, neonate N25.CNhs11094.1555-45E210.54
pancreas, neonate N30.CNhs11182.1548-44H513.41
pituitary gland, adult.CNhs10493.21-1G88.51
pituitary gland, embryo E12.CNhs11018.346-16E615.67
pituitary gland, embryo E13.CNhs11009.370-44C78.41
pituitary gland, embryo E14.CNhs11037.398-44A510.93
pituitary gland, embryo E15.CNhs10592.427-16B912.95
pituitary gland, embryo E16.CNhs11036.449-43F614.45
pituitary gland, embryo E17.CNhs11039.1265-44F512.34
pituitary gland, neonate N00.CNhs11190.1308-22E97.61
placenta, adult pregnant day10.CNhs10472.539-13I710.33
placenta, adult pregnant day17.CNhs10464.577-18G313.77
prostate, adult.CNhs10470.859-1F86.62
skin, adult.CNhs10492.30-1C38.74
skin, neonate N00.CNhs11124.650-25G49.20
skin, neonate N03.CNhs11215.662-22H311.16
skin, neonate N06.CNhs11097.693-20I510.27
skin, neonate N10.CNhs11108.762-6C49.68
small intestine, neonate N16.CNhs11114.790-21I131.48
spinal cord, adult.CNhs10505.24-13C99.46
spleen, adult.CNhs10465.25-2G212.64
spleen, embryo E16.CNhs11035.461-43C116.72
spleen, embryo E18.CNhs11011.1271-21F212.78
spleen, neonate N10.CNhs11116.752-24D114.50
spleen, neonate N20.CNhs11112.824-19H112.71
spleen, neonate N25.CNhs11099.1354-25G310.75
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C621.08
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C928.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D325.29
stomach, adult.CNhs10503.33-1H68.59
stomach, embryo E12.CNhs10588.356-43E318.19
stomach, embryo E15.CNhs10603.1252-16G816.27
stomach, embryo E16.CNhs11022.459-17D412.74
stomach, embryo E17.CNhs11006.1035-18D511.50
stomach, embryo E18.CNhs10999.1286-20C610.92
stomach, neonate N03.CNhs11193.1340-24B811.87
stomach, neonate N07.CNhs11210.718-18A910.25
stomach, neonate N25.CNhs11104.1355-25E413.61
stomach, neonate N30.CNhs11134.1386-42I117.11
submandibular gland, adult.CNhs10469.59-29C116.78
testis, adult.CNhs10504.57-7G545.66
testis, embryo E13.CNhs11031.389-23F527.96
testis, embryo E15.CNhs11034.443-27C523.50
testis, embryo E16.CNhs11033.470-26G526.45
testis, embryo E17.CNhs11029.486-18I514.47
testis, embryo E18.CNhs11027.503-18G518.42
testis, neonate N00.CNhs11189.1300-22B717.60
testis, neonate N07.CNhs11222.726-26I425.13
testis, neonate N10.CNhs11204.763-44D928.10
testis, neonate N20.CNhs11110.839-18H321.02
testis, neonate N30.CNhs11130.1391-42E223.62
thymus, adult.CNhs10471.38-12B511.38
thymus, embryo E14.CNhs11041.402-44I412.16
thymus, embryo E15.CNhs11005.430-45I215.10
thymus, embryo E16.CNhs11002.456-26C516.63
thymus, embryo E17.CNhs10581.478-18C117.90
thymus, embryo E18.CNhs10595.1273-19G418.68
thymus, neonate N02.CNhs11181.1541-43F816.35
thymus, neonate N03.CNhs11137.2104-43C718.31
thymus, neonate N06.CNhs11197.681-26C422.21
thymus, neonate N07.CNhs11211.713-19D319.36
thymus, neonate N10.CNhs11194.748-24E418.45
thymus, neonate N20.CNhs11186.820-7A214.23
thymus, neonate N25.CNhs11125.1362-25G719.24
thymus, neonate N30.CNhs11132.1393-42G216.01
tongue, adult.CNhs10499.32-1B47.94
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H321.98
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F717.40
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G517.12
urinary bladder, adult.CNhs10481.879-12E49.47
uterus, adult pregnant day19.CNhs10497.590-15F59.01
uterus, adult.CNhs10509.92-27E56.41
vagina, adult.CNhs10502.89-27D59.86
vesicular gland, adult.CNhs10491.51-27F812.04
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.75
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.03
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.08
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A416.44
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A812.69
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A911.91
whole body, embryo E11.CNhs11014.324-5I823.97
whole body, embryo E12.CNhs10587.857-27C920.75
whole body, embryo E13.CNhs10512.372-23H216.05
whole body, embryo E14.5.CNhs10578.420-27D213.61
whole body, embryo E14.CNhs10519.395-14B113.42
whole body, embryo E16.CNhs10514.453-14F214.89
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G512.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G511.74
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G514.44
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.61
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G511.15
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G512.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G512.08
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G513.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G515.22
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G513.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G514.02
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G515.24
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G516.07
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G516.49
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.94
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G514.20
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G514.54
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G511.77
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G515.53
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G513.88
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G514.09
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G513.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G513.72
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G514.03
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G514.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G514.48
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G519.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G513.32
whole body, embryo E17.5.CNhs10513.490-9F910.22
whole body, embryo E17.CNhs10517.475-3I59.49
whole body, embryo E18.CNhs10516.493-3B315.67
whole body, neonate N00.CNhs10525.657-19C211.39
whole body, neonate N01.CNhs10576.659-23C68.42
whole body, neonate N06.CNhs10515.692-21D19.93
whole body, neonate N10.CNhs10518.761-6B411.36





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
intestine1.13e-1231
digestive system2.63e-09116
digestive tract2.63e-09116
primitive gut2.63e-09116
endoderm-derived structure4.88e-09118
endoderm4.88e-09118
presumptive endoderm4.88e-09118
subdivision of digestive tract1.02e-08114
gut epithelium1.44e-0855
gastrointestinal system1.51e-0847
mucosa3.62e-0815
intestinal mucosa1.62e-0713
wall of intestine1.62e-0713
gastrointestinal system mucosa1.62e-0713
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