FFCP PHASE1:Mm9::chr6:48696168..48696179,+: Difference between revisions
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{{FFCP|EntrezGene=317757|HGNC=|MCL_coexpression_id=122|UniProt=Q8BWF2|association_with_transcript=-16bp_to_ENSMUST00000055558,NM_175035,uc009bvr.1,uc009bvs.1_5end|description=CAGE_peak_4_at_Gimap5_5end|id=chr6:48696168..48696179,+|ontology_enrichment_celltype=CL:0000838!9.30e-15!12;CL:0000084!1.48e-13!11;CL:0000827!1.48e-13!11;CL:0000542!2.61e-13!13;CL:0000051!2.61e-13!13;CL:0000791!2.03e-11!9;CL:0000789!2.03e-11!9;CL:0002420!2.03e-11!9;CL:0002419!2.03e-11!9;CL:0000790!2.03e-11!9;CL:0002031!1.52e-10!25;CL:0000624!2.13e-10!8;CL:0000738!2.92e-09!17;CL:0002087!2.92e-09!17;CL:0000893!5.64e-08!6;CL:0002489!5.64e-08!6;CL:0000898!5.64e-08!6;CL:0000809!5.64e-08!6;CL:0000810!5.64e-08!6;CL:0000895!5.64e-08!6;CL:0000808!5.64e-08!6;CL:0000894!5.64e-08!6;CL:0000806!5.64e-08!6;CL:0000807!5.64e-08!6;CL:0000805!5.64e-08!6;CL:0002425!5.64e-08!6;CL:0002436!5.64e-08!6;CL:0002427!5.64e-08!6;CL:0002428!5.64e-08!6;CL:0002429!5.64e-08!6;CL:0002433!5.64e-08!6;CL:0002431!5.64e-08!6;CL:0002432!5.64e-08!6;CL:0000988!4.01e-07!32;CL:0002032!4.01e-07!32;CL:0000037!4.01e-07!32;CL:0000566!4.01e-07!32;CL:0000837!4.01e-07!32|ontology_enrichment_celltype_v019_2=CL:0002031,4.88e-21,25;CL:0000838,3.15e-20,12;CL:0000542,1.37e-18,13;CL:0000051,1.37e-18,13;CL:0000084,5.42e-17,11;CL:0000827,5.42e-17,11;CL:0000988,5.66e-16,32;CL:0002032,5.66e-16,32;CL:0000037,5.66e-16,32;CL:0000837,5.66e-16,32;CL:0000791,1.29e-15,9;CL:0000789,1.29e-15,9;CL:0002420,1.29e-15,9;CL:0002419,1.29e-15,9;CL:0000790,1.29e-15,9;CL:0000738,5.87e-14,17;CL:0002087,5.87e-14,17;CL:0000624,9.48e-13,8;CL:0000553,4.70e-11,6;CL:0000556,4.70e-11,6;CL:0002320,1.84e-10,46;CL:0000134,1.84e-10,46;CL:0000219,1.35e-08,54;CL:0000050,2.14e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!3.16e-20!29;UBERON:0002193!2.57e-18!48;UBERON:0002370!4.59e-18!23;UBERON:0000974!4.59e-18!23;UBERON:0004807!4.59e-18!23;UBERON:0005058!4.59e-18!23;UBERON:0003351!4.59e-18!23;UBERON:0009113!4.59e-18!23;UBERON:0003295!4.59e-18!23;UBERON:0009722!4.59e-18!23;UBERON:0005562!4.59e-18!23;UBERON:0007690!4.59e-18!23;UBERON:0000065!2.47e-17!41;UBERON:0006562!5.09e-17!24;UBERON:0003408!5.09e-17!24;UBERON:0001557!5.09e-17!24;UBERON:0001042!5.09e-17!24;UBERON:0008814!5.09e-17!24;UBERON:0009145!5.09e-17!24;UBERON:0001004!1.08e-16!42;UBERON:0002390!1.01e-15!45;UBERON:0003061!1.01e-15!45;UBERON:0000072!2.30e-14!27;UBERON:0002405!5.92e-12!70;UBERON:0005057!7.65e-11!51;UBERON:0005911!1.10e-09!69;UBERON:0000063!1.36e-09!35;UBERON:0000077!3.42e-09!97;UBERON:0001041!5.84e-09!92;UBERON:0003081!1.54e-08!88;UBERON:0001007!4.90e-08!128;UBERON:0001555!4.90e-08!128;UBERON:0007026!4.90e-08!128;UBERON:0004119!1.02e-07!130;UBERON:0000925!1.02e-07!130;UBERON:0006595!1.02e-07!130;UBERON:0003104!2.51e-07!131;UBERON:0009142!2.51e-07!131;UBERON:0004921!3.78e-07!126;UBERON:0004185!3.78e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.23e-23,48;UBERON:0002405,2.23e-23,48;UBERON:0002390,3.73e-22,45;UBERON:0003061,3.73e-22,45;UBERON:0004177,3.10e-20,29;UBERON:0005057,3.10e-20,29;UBERON:0000077,2.24e-16,35;UBERON:0002370,2.74e-15,23;UBERON:0000974,2.74e-15,23;UBERON:0004807,2.74e-15,23;UBERON:0005058,2.74e-15,23;UBERON:0003351,2.74e-15,23;UBERON:0009113,2.74e-15,23;UBERON:0003295,2.74e-15,23;UBERON:0009722,2.74e-15,23;UBERON:0005562,2.74e-15,23;UBERON:0007690,2.74e-15,23;UBERON:0006562,1.39e-14,24;UBERON:0003408,1.39e-14,24;UBERON:0001557,1.39e-14,24;UBERON:0001042,1.39e-14,24;UBERON:0008814,1.39e-14,24;UBERON:0009145,1.39e-14,24;UBERON:0000072,8.74e-13,27;UBERON:0002384,1.84e-10,46;UBERON:0003081,5.45e-10,87;UBERON:0007811,3.48e-09,36;UBERON:0000065,7.23e-08,41;UBERON:0001004,1.22e-07,42;UBERON:0000153,1.99e-07,43|phase1_expression=0,0,0,0,0,0,0,5.4231795845462,1.68946466582,0.468129052643987,0.513653904676515,0.717949430958028,3.0816131387617,4.80812213304486,0,1.01237633694913,0,3.47008381894061,4.9361196098066,4.66828616977833,0,0.893618560807968,1.30599894569468,0.319984845586813,0.45881856213434,0,0,0,0.380046838912748,0,0.221730510655305,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,2.01339127269284,1.45072428402269,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,2.07150306917737,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0.36012412292203,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0.38992817423824,0,0,0.199141273254367,0,0,0,0,0,0.140271639780637,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0.252578877947112,0,0,0.369506380333209,0,0,0,0,0.167506257441816,0.238043640886014,0,0.630540576424764,0.221464689648775,0.318909537314974,0.163863314715738,0.690739927463582,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0,0,1.02522528478712,0,0,0.376736914009382,1.36694227721025,1.83022538565218,0.169978429993855,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,2.21207784439725,0.202725215290164,0.308132871494482,1.03936658382236,0.358053391334963,0.39736270956253,1.08175904567972,0.886137163047463,0.706765149637033,0.685861259894999,1.10908803650525,1.16949456887703,1.53938946624527,1.16876902181569,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.114870937911227,0,0.115884325944855,0,0,0,0.342869252385415,0,0,0,0,0,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0.463735671240843|short_description=p4@Gimap5}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:317757 | |||
|HGNC= | |||
|MCL_coexpression_id=122 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BWF2 | |||
|association_with_transcript=-16bp_to_ENSMUST00000055558,NM_175035,uc009bvr.1,uc009bvs.1_5end | |||
|cluster_id=chr6:48696168..48696179,+ | |||
|description=CAGE_peak_4_at_Gimap5_5end | |||
|id=chr6:48696168..48696179,+ | |||
|ontology_enrichment_celltype=CL:0000838!9.30e-15!12;CL:0000084!1.48e-13!11;CL:0000827!1.48e-13!11;CL:0000542!2.61e-13!13;CL:0000051!2.61e-13!13;CL:0000791!2.03e-11!9;CL:0000789!2.03e-11!9;CL:0002420!2.03e-11!9;CL:0002419!2.03e-11!9;CL:0000790!2.03e-11!9;CL:0002031!1.52e-10!25;CL:0000624!2.13e-10!8;CL:0000738!2.92e-09!17;CL:0002087!2.92e-09!17;CL:0000893!5.64e-08!6;CL:0002489!5.64e-08!6;CL:0000898!5.64e-08!6;CL:0000809!5.64e-08!6;CL:0000810!5.64e-08!6;CL:0000895!5.64e-08!6;CL:0000808!5.64e-08!6;CL:0000894!5.64e-08!6;CL:0000806!5.64e-08!6;CL:0000807!5.64e-08!6;CL:0000805!5.64e-08!6;CL:0002425!5.64e-08!6;CL:0002436!5.64e-08!6;CL:0002427!5.64e-08!6;CL:0002428!5.64e-08!6;CL:0002429!5.64e-08!6;CL:0002433!5.64e-08!6;CL:0002431!5.64e-08!6;CL:0002432!5.64e-08!6;CL:0000988!4.01e-07!32;CL:0002032!4.01e-07!32;CL:0000037!4.01e-07!32;CL:0000566!4.01e-07!32;CL:0000837!4.01e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,4.88e-21,25;CL:0000838,3.15e-20,12;CL:0000542,1.37e-18,13;CL:0000051,1.37e-18,13;CL:0000084,5.42e-17,11;CL:0000827,5.42e-17,11;CL:0000988,5.66e-16,32;CL:0002032,5.66e-16,32;CL:0000037,5.66e-16,32;CL:0000837,5.66e-16,32;CL:0000791,1.29e-15,9;CL:0000789,1.29e-15,9;CL:0002420,1.29e-15,9;CL:0002419,1.29e-15,9;CL:0000790,1.29e-15,9;CL:0000738,5.87e-14,17;CL:0002087,5.87e-14,17;CL:0000624,9.48e-13,8;CL:0000553,4.70e-11,6;CL:0000556,4.70e-11,6;CL:0002320,1.84e-10,46;CL:0000134,1.84e-10,46;CL:0000219,1.35e-08,54;CL:0000050,2.14e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!3.16e-20!29;UBERON:0002193!2.57e-18!48;UBERON:0002370!4.59e-18!23;UBERON:0000974!4.59e-18!23;UBERON:0004807!4.59e-18!23;UBERON:0005058!4.59e-18!23;UBERON:0003351!4.59e-18!23;UBERON:0009113!4.59e-18!23;UBERON:0003295!4.59e-18!23;UBERON:0009722!4.59e-18!23;UBERON:0005562!4.59e-18!23;UBERON:0007690!4.59e-18!23;UBERON:0000065!2.47e-17!41;UBERON:0006562!5.09e-17!24;UBERON:0003408!5.09e-17!24;UBERON:0001557!5.09e-17!24;UBERON:0001042!5.09e-17!24;UBERON:0008814!5.09e-17!24;UBERON:0009145!5.09e-17!24;UBERON:0001004!1.08e-16!42;UBERON:0002390!1.01e-15!45;UBERON:0003061!1.01e-15!45;UBERON:0000072!2.30e-14!27;UBERON:0002405!5.92e-12!70;UBERON:0005057!7.65e-11!51;UBERON:0005911!1.10e-09!69;UBERON:0000063!1.36e-09!35;UBERON:0000077!3.42e-09!97;UBERON:0001041!5.84e-09!92;UBERON:0003081!1.54e-08!88;UBERON:0001007!4.90e-08!128;UBERON:0001555!4.90e-08!128;UBERON:0007026!4.90e-08!128;UBERON:0004119!1.02e-07!130;UBERON:0000925!1.02e-07!130;UBERON:0006595!1.02e-07!130;UBERON:0003104!2.51e-07!131;UBERON:0009142!2.51e-07!131;UBERON:0004921!3.78e-07!126;UBERON:0004185!3.78e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.23e-23,48;UBERON:0002405,2.23e-23,48;UBERON:0002390,3.73e-22,45;UBERON:0003061,3.73e-22,45;UBERON:0004177,3.10e-20,29;UBERON:0005057,3.10e-20,29;UBERON:0000077,2.24e-16,35;UBERON:0002370,2.74e-15,23;UBERON:0000974,2.74e-15,23;UBERON:0004807,2.74e-15,23;UBERON:0005058,2.74e-15,23;UBERON:0003351,2.74e-15,23;UBERON:0009113,2.74e-15,23;UBERON:0003295,2.74e-15,23;UBERON:0009722,2.74e-15,23;UBERON:0005562,2.74e-15,23;UBERON:0007690,2.74e-15,23;UBERON:0006562,1.39e-14,24;UBERON:0003408,1.39e-14,24;UBERON:0001557,1.39e-14,24;UBERON:0001042,1.39e-14,24;UBERON:0008814,1.39e-14,24;UBERON:0009145,1.39e-14,24;UBERON:0000072,8.74e-13,27;UBERON:0002384,1.84e-10,46;UBERON:0003081,5.45e-10,87;UBERON:0007811,3.48e-09,36;UBERON:0000065,7.23e-08,41;UBERON:0001004,1.22e-07,42;UBERON:0000153,1.99e-07,43 | |||
|phase1_expression=0,0,0,0,0,0,0,5.4231795845462,1.68946466582,0.468129052643987,0.513653904676515,0.717949430958028,3.0816131387617,4.80812213304486,0,1.01237633694913,0,3.47008381894061,4.9361196098066,4.66828616977833,0,0.893618560807968,1.30599894569468,0.319984845586813,0.45881856213434,0,0,0,0.380046838912748,0,0.221730510655305,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,2.01339127269284,1.45072428402269,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,2.07150306917737,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0.36012412292203,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0.38992817423824,0,0,0.199141273254367,0,0,0,0,0,0.140271639780637,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0.252578877947112,0,0,0.369506380333209,0,0,0,0,0.167506257441816,0.238043640886014,0,0.630540576424764,0.221464689648775,0.318909537314974,0.163863314715738,0.690739927463582,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0,0,1.02522528478712,0,0,0.376736914009382,1.36694227721025,1.83022538565218,0.169978429993855,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,2.21207784439725,0.202725215290164,0.308132871494482,1.03936658382236,0.358053391334963,0.39736270956253,1.08175904567972,0.886137163047463,0.706765149637033,0.685861259894999,1.10908803650525,1.16949456887703,1.53938946624527,1.16876902181569,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.114870937911227,0,0.115884325944855,0,0,0,0.342869252385415,0,0,0,0,0,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0.463735671240843 | |||
|short_description=p4@Gimap5 | |||
}} |
Revision as of 20:31, 5 August 2015
Short description: | p4@Gimap5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Gimap5_5end |
Coexpression cluster: | MCL_coexpression_mm9:122 |
Association with transcript: | -16bp_to_ENSMUST00000055558, NM_175035, uc009bvr.1, uc009bvs.1_5end |
EntrezGene: | 317757 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 4.88e-21 | 25 |
lymphoid lineage restricted progenitor cell | 3.15e-20 | 12 |
lymphocyte | 1.37e-18 | 13 |
common lymphoid progenitor | 1.37e-18 | 13 |
T cell | 5.42e-17 | 11 |
pro-T cell | 5.42e-17 | 11 |
hematopoietic cell | 5.66e-16 | 32 |
hematopoietic oligopotent progenitor cell | 5.66e-16 | 32 |
hematopoietic stem cell | 5.66e-16 | 32 |
hematopoietic multipotent progenitor cell | 5.66e-16 | 32 |
mature alpha-beta T cell | 1.29e-15 | 9 |
alpha-beta T cell | 1.29e-15 | 9 |
immature T cell | 1.29e-15 | 9 |
mature T cell | 1.29e-15 | 9 |
immature alpha-beta T cell | 1.29e-15 | 9 |
leukocyte | 5.87e-14 | 17 |
nongranular leukocyte | 5.87e-14 | 17 |
CD4-positive, alpha-beta T cell | 9.48e-13 | 8 |
megakaryocyte progenitor cell | 4.70e-11 | 6 |
megakaryocyte | 4.70e-11 | 6 |
connective tissue cell | 1.84e-10 | 46 |
mesenchymal cell | 1.84e-10 | 46 |
motile cell | 1.35e-08 | 54 |
megakaryocyte-erythroid progenitor cell | 2.14e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.23e-23 | 48 |
immune system | 2.23e-23 | 48 |
hematopoietic system | 3.73e-22 | 45 |
blood island | 3.73e-22 | 45 |
hemopoietic organ | 3.10e-20 | 29 |
immune organ | 3.10e-20 | 29 |
mixed endoderm/mesoderm-derived structure | 2.24e-16 | 35 |
thymus | 2.74e-15 | 23 |
neck | 2.74e-15 | 23 |
respiratory system epithelium | 2.74e-15 | 23 |
hemolymphoid system gland | 2.74e-15 | 23 |
pharyngeal epithelium | 2.74e-15 | 23 |
thymic region | 2.74e-15 | 23 |
pharyngeal gland | 2.74e-15 | 23 |
entire pharyngeal arch endoderm | 2.74e-15 | 23 |
thymus primordium | 2.74e-15 | 23 |
early pharyngeal endoderm | 2.74e-15 | 23 |
pharynx | 1.39e-14 | 24 |
gland of gut | 1.39e-14 | 24 |
upper respiratory tract | 1.39e-14 | 24 |
chordate pharynx | 1.39e-14 | 24 |
pharyngeal arch system | 1.39e-14 | 24 |
pharyngeal region of foregut | 1.39e-14 | 24 |
segment of respiratory tract | 8.74e-13 | 27 |
connective tissue | 1.84e-10 | 46 |
lateral plate mesoderm | 5.45e-10 | 87 |
craniocervical region | 3.48e-09 | 36 |
respiratory tract | 7.23e-08 | 41 |
respiratory system | 1.22e-07 | 42 |
anterior region of body | 1.99e-07 | 43 |