FFCP PHASE1:Mm9::chrX:100129517..100129546,-: Difference between revisions
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{{FFCP|EntrezGene=331480|HGNC=|MCL_coexpression_id=1678|UniProt=|association_with_transcript=15bp_to_NR_026596,uc012hnc.1_5end|description=CAGE_peak_1_at_Gm5126_5end|id=chrX:100129517..100129546,-|ontology_enrichment_celltype=CL:0000221!4.88e-11!44;CL:0000133!4.88e-11!44;CL:0002319!1.42e-10!43;CL:0000540!6.10e-10!33;CL:0000047!6.10e-10!33;CL:0000031!6.10e-10!33;CL:0000404!6.10e-10!33;CL:0000117!1.65e-09!23;CL:0000337!1.65e-09!23;CL:0000055!5.70e-08!50;CL:0000393!1.28e-07!39;CL:0000211!1.28e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,2.39e-11,23;CL:0000337,2.39e-11,23;CL:0000221,5.23e-10,44;CL:0000133,5.23e-10,44;CL:0002319,2.22e-09,43;CL:0000540,1.10e-08,33;CL:0000047,1.10e-08,33;CL:0000031,1.10e-08,33;CL:0000404,1.10e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.45e-30!73;UBERON:0005743!6.45e-30!73;UBERON:0000073!1.44e-28!75;UBERON:0001016!1.44e-28!75;UBERON:0001049!3.38e-24!52;UBERON:0005068!3.38e-24!52;UBERON:0006241!3.38e-24!52;UBERON:0007135!3.38e-24!52;UBERON:0004121!8.68e-24!102;UBERON:0000924!8.68e-24!102;UBERON:0006601!8.68e-24!102;UBERON:0000955!1.07e-23!50;UBERON:0006238!1.07e-23!50;UBERON:0002616!5.22e-23!49;UBERON:0002346!8.37e-23!71;UBERON:0003075!8.37e-23!71;UBERON:0007284!8.37e-23!71;UBERON:0000033!1.47e-22!63;UBERON:0003056!5.69e-18!49;UBERON:0003080!6.17e-18!40;UBERON:0002780!2.87e-17!39;UBERON:0001890!2.87e-17!39;UBERON:0006240!2.87e-17!39;UBERON:0002020!1.86e-15!34;UBERON:0002791!4.70e-13!29;UBERON:0003528!4.70e-13!29;UBERON:0001893!4.70e-13!29;UBERON:0007811!1.35e-12!86;UBERON:0000153!1.87e-12!94;UBERON:0000956!7.54e-09!21;UBERON:0001869!7.54e-09!21;UBERON:0000203!7.54e-09!21;UBERON:0002619!9.42e-08!17;UBERON:0004111!1.19e-07!122;UBERON:0002021!2.36e-07!10;UBERON:0000411!2.36e-07!10;UBERON:0001950!2.36e-07!10;UBERON:0000025!3.70e-07!114;UBERON:0003076!7.20e-07!12;UBERON:0003057!7.20e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.59e-35,73;UBERON:0001016,7.17e-34,75;UBERON:0000073,1.04e-32,54;UBERON:0001049,2.21e-30,52;UBERON:0005068,2.21e-30,52;UBERON:0006241,2.21e-30,52;UBERON:0007135,2.21e-30,52;UBERON:0004121,2.64e-27,95;UBERON:0000924,2.64e-27,95;UBERON:0006601,2.64e-27,95;UBERON:0002346,1.36e-26,64;UBERON:0003075,1.36e-26,64;UBERON:0007284,1.36e-26,64;UBERON:0000955,3.57e-26,47;UBERON:0006238,3.57e-26,47;UBERON:0002616,3.96e-25,46;UBERON:0010371,1.09e-22,73;UBERON:0003080,1.49e-21,40;UBERON:0002780,1.60e-20,39;UBERON:0001890,1.60e-20,39;UBERON:0006240,1.60e-20,39;UBERON:0003056,6.30e-19,49;UBERON:0002020,1.55e-18,34;UBERON:0010314,7.87e-15,92;UBERON:0003528,9.81e-15,29;UBERON:0002791,9.81e-15,29;UBERON:0001893,9.81e-15,29;UBERON:0000025,8.68e-10,114;UBERON:0002021,8.93e-10,10;UBERON:0000411,8.93e-10,10;UBERON:0001950,8.93e-10,10;UBERON:0004111,1.55e-09,122;UBERON:0003076,3.28e-09,12;UBERON:0003057,3.28e-09,12;UBERON:0000956,2.25e-08,21;UBERON:0001869,2.25e-08,21;UBERON:0000203,2.25e-08,21;UBERON:0002420,2.49e-08,8;UBERON:0007245,2.49e-08,8;UBERON:0010009,2.49e-08,8;UBERON:0010011,2.49e-08,8;UBERON:0000454,2.49e-08,8;UBERON:0002619,2.73e-08,17;UBERON:0001894,8.80e-07,10;UBERON:0006222,8.80e-07,10|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,0.872100625521786,0.878744730937887,2.13872888981712,0,1.43752564364972,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,2.83243045203437,3.70293685490423,2.53532561402472,0,0,0,0.988866362566974,0,1.49800055259202,4.2264013585371,0.933206510776299,1.35005938331691,0.630974884054146,2.57085885963423,3.53389665522582,0.61245399607477,0.958454710182364,0,7.70811166995721,6.2566795661742,4.6081959976873,2.63772575460388,1.73826522844578,1.56274011167028,4.18774498502071,4.50210088025344,7.18151764551008,1.76777151284201,2.27794689278565,2.60959224155421,0,0.226714680320357,0.289864488701678,0,0,0,0,0,0.561777680527007,0,0,0,2.67602497575693,0,0,0,0,0.506719730950197,0,0.5709193985953,0,0.890652834388949,0.346970653532272,0.304465478312141,0,0.452167921657868,0.117588707135705,0.251333182659351,0.247194967734374,0.289198713839823,0,0,0,0,0,2.92780797011547,4.1889341362691,0,0,0,0,5.84183493678809,8.6925114535539,3.01570445070875,7.64827008846016,5.37002460393694,7.68815764870372,5.19172041816825,1.93494791315601,3.6078021476927,39.4247503156533,0.420883711772948,0.130120442962704,0.689706313300419,1.44049703844279,0.30140963567143,0.476255494059295,1.15302348256365,0.468508622798644,1.81092359517311,0.215567992932842,1.32374256117473,0.879755620819744,1.31517439456545,0.278047249225598,1.0447564995665,0,1.59227413454795,0,0,0,0,0,0.36012412292203,0.473489471170421,0,0.771335564436891,0.232533944750408,0,0,0.16455984991348,0,0.0810688095458557,0.292399974850665,0.878200461164203,0.536825675041487,6.09840850835969,1.54356918568927,0,0,0.639864751605702,0.232236671860439,0.515469845288373,0.201683524623343,0.444756087689741,0.570676878337677,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:331480 | |||
|HGNC= | |||
|MCL_coexpression_id=1678 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=15bp_to_NR_026596,uc012hnc.1_5end | |||
|cluster_id=chrX:100129517..100129546,- | |||
|description=CAGE_peak_1_at_Gm5126_5end | |||
|id=chrX:100129517..100129546,- | |||
|ontology_enrichment_celltype=CL:0000221!4.88e-11!44;CL:0000133!4.88e-11!44;CL:0002319!1.42e-10!43;CL:0000540!6.10e-10!33;CL:0000047!6.10e-10!33;CL:0000031!6.10e-10!33;CL:0000404!6.10e-10!33;CL:0000117!1.65e-09!23;CL:0000337!1.65e-09!23;CL:0000055!5.70e-08!50;CL:0000393!1.28e-07!39;CL:0000211!1.28e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.39e-11,23;CL:0000337,2.39e-11,23;CL:0000221,5.23e-10,44;CL:0000133,5.23e-10,44;CL:0002319,2.22e-09,43;CL:0000540,1.10e-08,33;CL:0000047,1.10e-08,33;CL:0000031,1.10e-08,33;CL:0000404,1.10e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.45e-30!73;UBERON:0005743!6.45e-30!73;UBERON:0000073!1.44e-28!75;UBERON:0001016!1.44e-28!75;UBERON:0001049!3.38e-24!52;UBERON:0005068!3.38e-24!52;UBERON:0006241!3.38e-24!52;UBERON:0007135!3.38e-24!52;UBERON:0004121!8.68e-24!102;UBERON:0000924!8.68e-24!102;UBERON:0006601!8.68e-24!102;UBERON:0000955!1.07e-23!50;UBERON:0006238!1.07e-23!50;UBERON:0002616!5.22e-23!49;UBERON:0002346!8.37e-23!71;UBERON:0003075!8.37e-23!71;UBERON:0007284!8.37e-23!71;UBERON:0000033!1.47e-22!63;UBERON:0003056!5.69e-18!49;UBERON:0003080!6.17e-18!40;UBERON:0002780!2.87e-17!39;UBERON:0001890!2.87e-17!39;UBERON:0006240!2.87e-17!39;UBERON:0002020!1.86e-15!34;UBERON:0002791!4.70e-13!29;UBERON:0003528!4.70e-13!29;UBERON:0001893!4.70e-13!29;UBERON:0007811!1.35e-12!86;UBERON:0000153!1.87e-12!94;UBERON:0000956!7.54e-09!21;UBERON:0001869!7.54e-09!21;UBERON:0000203!7.54e-09!21;UBERON:0002619!9.42e-08!17;UBERON:0004111!1.19e-07!122;UBERON:0002021!2.36e-07!10;UBERON:0000411!2.36e-07!10;UBERON:0001950!2.36e-07!10;UBERON:0000025!3.70e-07!114;UBERON:0003076!7.20e-07!12;UBERON:0003057!7.20e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.59e-35,73;UBERON:0001016,7.17e-34,75;UBERON:0000073,1.04e-32,54;UBERON:0001049,2.21e-30,52;UBERON:0005068,2.21e-30,52;UBERON:0006241,2.21e-30,52;UBERON:0007135,2.21e-30,52;UBERON:0004121,2.64e-27,95;UBERON:0000924,2.64e-27,95;UBERON:0006601,2.64e-27,95;UBERON:0002346,1.36e-26,64;UBERON:0003075,1.36e-26,64;UBERON:0007284,1.36e-26,64;UBERON:0000955,3.57e-26,47;UBERON:0006238,3.57e-26,47;UBERON:0002616,3.96e-25,46;UBERON:0010371,1.09e-22,73;UBERON:0003080,1.49e-21,40;UBERON:0002780,1.60e-20,39;UBERON:0001890,1.60e-20,39;UBERON:0006240,1.60e-20,39;UBERON:0003056,6.30e-19,49;UBERON:0002020,1.55e-18,34;UBERON:0010314,7.87e-15,92;UBERON:0003528,9.81e-15,29;UBERON:0002791,9.81e-15,29;UBERON:0001893,9.81e-15,29;UBERON:0000025,8.68e-10,114;UBERON:0002021,8.93e-10,10;UBERON:0000411,8.93e-10,10;UBERON:0001950,8.93e-10,10;UBERON:0004111,1.55e-09,122;UBERON:0003076,3.28e-09,12;UBERON:0003057,3.28e-09,12;UBERON:0000956,2.25e-08,21;UBERON:0001869,2.25e-08,21;UBERON:0000203,2.25e-08,21;UBERON:0002420,2.49e-08,8;UBERON:0007245,2.49e-08,8;UBERON:0010009,2.49e-08,8;UBERON:0010011,2.49e-08,8;UBERON:0000454,2.49e-08,8;UBERON:0002619,2.73e-08,17;UBERON:0001894,8.80e-07,10;UBERON:0006222,8.80e-07,10 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,0.872100625521786,0.878744730937887,2.13872888981712,0,1.43752564364972,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,2.83243045203437,3.70293685490423,2.53532561402472,0,0,0,0.988866362566974,0,1.49800055259202,4.2264013585371,0.933206510776299,1.35005938331691,0.630974884054146,2.57085885963423,3.53389665522582,0.61245399607477,0.958454710182364,0,7.70811166995721,6.2566795661742,4.6081959976873,2.63772575460388,1.73826522844578,1.56274011167028,4.18774498502071,4.50210088025344,7.18151764551008,1.76777151284201,2.27794689278565,2.60959224155421,0,0.226714680320357,0.289864488701678,0,0,0,0,0,0.561777680527007,0,0,0,2.67602497575693,0,0,0,0,0.506719730950197,0,0.5709193985953,0,0.890652834388949,0.346970653532272,0.304465478312141,0,0.452167921657868,0.117588707135705,0.251333182659351,0.247194967734374,0.289198713839823,0,0,0,0,0,2.92780797011547,4.1889341362691,0,0,0,0,5.84183493678809,8.6925114535539,3.01570445070875,7.64827008846016,5.37002460393694,7.68815764870372,5.19172041816825,1.93494791315601,3.6078021476927,39.4247503156533,0.420883711772948,0.130120442962704,0.689706313300419,1.44049703844279,0.30140963567143,0.476255494059295,1.15302348256365,0.468508622798644,1.81092359517311,0.215567992932842,1.32374256117473,0.879755620819744,1.31517439456545,0.278047249225598,1.0447564995665,0,1.59227413454795,0,0,0,0,0,0.36012412292203,0.473489471170421,0,0.771335564436891,0.232533944750408,0,0,0.16455984991348,0,0.0810688095458557,0.292399974850665,0.878200461164203,0.536825675041487,6.09840850835969,1.54356918568927,0,0,0.639864751605702,0.232236671860439,0.515469845288373,0.201683524623343,0.444756087689741,0.570676878337677,0,0.164698954724011,0,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0.189667900953082,0.228497025219458,0,0.610953983535943,0.581857461502877,0.98190147846446,0.632365371242573,1.47610147979602,0.470996183524124,0.493588655687202,0,0,0.393117990226406,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66277871149944,0.757965647081939,0.325929952884052,0,0.469380496577004,0.335012514883631,0.238043640886014,0,0.315270288212382,0.664394068946325,0,0.163863314715738,0.690739927463582,0.578596234326046,0,0,0,0.275936746304732,3.53211297973142,2.69586879162067,0,0,0.94652465824877,0.390438744296638,1.07711698866399,1.43381278771531,0.222798674082394,0.283076530788832,0.404810701674894,1.46127928955656,0.790575555893047,5.46246237917072,0.141940085208269,1.24645922567079,2.11753047159649,2.63952196756057,0,1.21390318077491,1.81394134178851,1.50884063804718,1.47650946440386,1.53717573971964,0.775284879504663,0.727067458955011,1.06949213515416,0.316036757935816,0,1.03135543248187,4.76615448055303,1.62054984628179,1.29358683782755,1.50035924522115,0.709360934569094,1.07021290561242,1.97458824722545,3.34911444026059,0,2.54198485036584,0.882113592219848,0.49465875882444,0.161464426695906,0.0603129249281559,0,0.164140899745061,0.291480836629851,5.56275906031529,0,0.206386867963223,0,0,0,0,0,0.559805809294632,0.138199973804424,0.954670618015114,1.58167996790568,0.813277868507395,0.756037385752609,0.418176592028937,0.87345025498471,0.134864346384821,0.41326727862668,0,0.129614973291793,0,3.38215763210514,0.149516546043979,0.496375471371293,0.972255941720238,1.16243841129958,0.675824501963113,1.40828686374905,2.47388331203505,6.08184197669123,1.69108884578204,2.30424005006292,1.58005560314089,0.202725215290164,0.616265742988964,0.25984164595559,0.179026695667481,0.39736270956253,0,0.147689527174577,0.100966449948148,0.15241361331,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0,0,0,0,2.12508553435409,0.375364950902364,0.36630324853453,0.428736758158132,0.501572104035363,3.3885110557024,0.920650473014354,4.01026859407578,6.01486138202907,9.59115527678899,7.55393897389701,8.77529250301348,9.00642406448441,6.34399372577886,5.69536342927002,0.62272408550506,0.399024873401031,0,0.486213434136588,0.419226325255965,0.551530525350042,0,0.206035057238894,0.320919209591815,0.252697211763798,0.760437899670719,0.188626341386076,0.37456602987953,0.128050304809739,0.17230640686684,0.952587382566147,0.463537303779422,0.192909220463705,1.23625770240992,0.294397840268795,0,0.177475806159338,0.476872379894642,0.290692833264657,1.12931256498397,0.423073039458382,0.365855945745545,0.263069711437843,0.407412341537585,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0.385813221962283,0.249810577937946,0.467863216890817,0.214871054048298,0.382576664137687,0.220591419119515,0 | |||
|short_description=p1@Gm5126 | |||
}} |
Revision as of 21:29, 5 August 2015
Short description: | p1@Gm5126 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm5126_5end |
Coexpression cluster: | MCL_coexpression_mm9:1678 |
Association with transcript: | 15bp_to_NR_026596, uc012hnc.1_5end |
EntrezGene: | 331480 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.39e-11 | 23 |
neuroblast (sensu Vertebrata) | 2.39e-11 | 23 |
ectodermal cell | 5.23e-10 | 44 |
neurectodermal cell | 5.23e-10 | 44 |
neural cell | 2.22e-09 | 43 |
neuron | 1.10e-08 | 33 |
neuronal stem cell | 1.10e-08 | 33 |
neuroblast | 1.10e-08 | 33 |
electrically signaling cell | 1.10e-08 | 33 |