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FFCP PHASE1:Mm9::chr3:115710653..115710683,+: Difference between revisions

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{{FFCP|EntrezGene=58193|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=-62bp_to_ENSMUST00000149920_5end|description=CAGE_peak_4_at_Extl2_5end|id=chr3:115710653..115710683,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.08e-19!71;UBERON:0003075!1.08e-19!71;UBERON:0007284!1.08e-19!71;UBERON:0004121!2.54e-19!102;UBERON:0000924!2.54e-19!102;UBERON:0006601!2.54e-19!102;UBERON:0000073!5.28e-17!75;UBERON:0001016!5.28e-17!75;UBERON:0000033!3.09e-16!63;UBERON:0001017!3.97e-16!73;UBERON:0005743!3.97e-16!73;UBERON:0001049!1.51e-14!52;UBERON:0005068!1.51e-14!52;UBERON:0006241!1.51e-14!52;UBERON:0007135!1.51e-14!52;UBERON:0003056!2.53e-14!49;UBERON:0000955!1.93e-12!50;UBERON:0006238!1.93e-12!50;UBERON:0002616!5.82e-12!49;UBERON:0003080!8.45e-11!40;UBERON:0002780!3.24e-10!39;UBERON:0001890!3.24e-10!39;UBERON:0006240!3.24e-10!39;UBERON:0002020!3.51e-10!34;UBERON:0000153!4.00e-09!94;UBERON:0007811!5.00e-09!86;UBERON:0002791!4.70e-08!29;UBERON:0003528!4.70e-08!29;UBERON:0001893!4.70e-08!29;UBERON:0002021!7.05e-08!10;UBERON:0000411!7.05e-08!10;UBERON:0001950!7.05e-08!10;UBERON:0004111!7.64e-08!122;UBERON:0000025!5.43e-07!114;UBERON:0002619!6.81e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.52e-26,92;UBERON:0004121,8.64e-21,95;UBERON:0000924,8.64e-21,95;UBERON:0006601,8.64e-21,95;UBERON:0002346,4.26e-20,64;UBERON:0003075,4.26e-20,64;UBERON:0007284,4.26e-20,64;UBERON:0010371,7.50e-19,73;UBERON:0001016,1.83e-18,75;UBERON:0001017,2.11e-17,73;UBERON:0000073,1.62e-15,54;UBERON:0001049,1.96e-15,52;UBERON:0005068,1.96e-15,52;UBERON:0006241,1.96e-15,52;UBERON:0007135,1.96e-15,52;UBERON:0003056,2.67e-15,49;UBERON:0000955,1.38e-12,47;UBERON:0006238,1.38e-12,47;UBERON:0002616,5.16e-12,46;UBERON:0003080,5.19e-11,40;UBERON:0002020,6.24e-11,34;UBERON:0002780,2.55e-10,39;UBERON:0001890,2.55e-10,39;UBERON:0006240,2.55e-10,39;UBERON:0002021,1.32e-09,10;UBERON:0000411,1.32e-09,10;UBERON:0001950,1.32e-09,10;UBERON:0004111,2.04e-09,122;UBERON:0003528,2.42e-08,29;UBERON:0002791,2.42e-08,29;UBERON:0001893,2.42e-08,29;UBERON:0002619,3.19e-08,17;UBERON:0000025,4.12e-08,114;UBERON:0000956,9.65e-07,21;UBERON:0001869,9.65e-07,21;UBERON:0000203,9.65e-07,21|phase1_expression=3.36312578920067,0,0,0,0,0.16787927191189,0,0,0.422366166455,0,1.54096171402954,1.99430397488341,0.171200729931206,0.174840804837995,0,0.809901069559304,0,0.157731082679119,0.274228867211478,0,1.36069264241712,0.794327609607082,1.04479915655574,0.319984845586813,0.68822784320151,0,0,0.215471232685889,0,0.252030129759931,0.221730510655305,1.27006134691926,0.61506478758457,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,2.39203954153597,1.72340783073175,1.10128051297009,0.782391344348039,0.218025156380447,1.75748946187577,1.74986909166855,1.25987779462826,0,0.503347818173209,0,0.336093799142464,1.54355661621568,2.86533439938757,2.57836046138721,1.41621522601718,2.11596391708813,1.90149421051854,0.338844532069132,0.889294796111139,0,0,0.7104801149461,0.299600110518405,1.15265491596466,0.725827286159344,0.405017814995072,0.841299845405528,2.28520787523043,2.65042249141936,0.734944795289724,0.575072826109418,0,0,4.97980618532232,3.5329502648936,0.659431438650969,0.731901148819277,1.04182674111352,3.07101298901519,2.8138130501584,2.59757021220577,2.65165726926301,2.27794689278565,1.67759501242771,1.59025005999687,3.09843396437821,0,0,0,0,0,0,1.12355536105401,0.681721290312231,0.779358013808606,1.7666978725517,1.83096445709685,0,0,0,1.5154372870785,0.506719730950197,1.51657333504435,0.45673551887624,0.776813650941515,1.33597925158342,0.346970653532272,1.21786191324856,1.84492397804847,1.65794904607885,1.88141931417128,1.0053327306374,0.247194967734374,0.578397427679647,0,0.808834249737046,0.441683036920787,0.969750506270444,0,2.92780797011547,1.25668024088073,0.766371165625774,0.11981512450592,0.599902730993408,0.508280908292259,5.09288173976397,5.94750783664214,1.63350657746724,3.30266208365325,5.11430914660661,3.74018480207208,6.00292673350703,1.62942982160506,0.622034853050465,1.51633655060205,1.05220927943237,1.69156575851515,2.5289231487682,2.34080768746954,1.80845781402858,2.38127747029647,2.17793324484245,2.24884138943349,3.10444044886819,1.72454394346274,1.32374256117473,0.527853372491847,1.09597866213787,0.278047249225598,1.0447564995665,1.02891068203972,0.398068533636986,0,0.257347907114715,0.284163499395593,2.48550927042602,2.57978665979206,1.44049649168812,1.65721314909647,1.57411385397923,1.23413690309903,1.62773761325285,1.87791380979733,2.33530684734339,0.987359099480883,0.492502392237286,1.13496333364198,0.292399974850665,0.878200461164203,1.20785776884335,2.3131894342054,2.16099685996497,0,0,0.853153002140936,0.696710015581316,0.902072229254653,1.61346819698674,0.22237804384487,0.760902504450237,0.474529061544512,1.15289268306808,0.502670417600539,0.994782360205754,0.38992817423824,0,0.216138049874694,0.199141273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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:58193
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=
|association_with_transcript=-62bp_to_ENSMUST00000149920_5end
|cluster_id=chr3:115710653..115710683,+
|description=CAGE_peak_4_at_Extl2_5end
|id=chr3:115710653..115710683,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.08e-19!71;UBERON:0003075!1.08e-19!71;UBERON:0007284!1.08e-19!71;UBERON:0004121!2.54e-19!102;UBERON:0000924!2.54e-19!102;UBERON:0006601!2.54e-19!102;UBERON:0000073!5.28e-17!75;UBERON:0001016!5.28e-17!75;UBERON:0000033!3.09e-16!63;UBERON:0001017!3.97e-16!73;UBERON:0005743!3.97e-16!73;UBERON:0001049!1.51e-14!52;UBERON:0005068!1.51e-14!52;UBERON:0006241!1.51e-14!52;UBERON:0007135!1.51e-14!52;UBERON:0003056!2.53e-14!49;UBERON:0000955!1.93e-12!50;UBERON:0006238!1.93e-12!50;UBERON:0002616!5.82e-12!49;UBERON:0003080!8.45e-11!40;UBERON:0002780!3.24e-10!39;UBERON:0001890!3.24e-10!39;UBERON:0006240!3.24e-10!39;UBERON:0002020!3.51e-10!34;UBERON:0000153!4.00e-09!94;UBERON:0007811!5.00e-09!86;UBERON:0002791!4.70e-08!29;UBERON:0003528!4.70e-08!29;UBERON:0001893!4.70e-08!29;UBERON:0002021!7.05e-08!10;UBERON:0000411!7.05e-08!10;UBERON:0001950!7.05e-08!10;UBERON:0004111!7.64e-08!122;UBERON:0000025!5.43e-07!114;UBERON:0002619!6.81e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.52e-26,92;UBERON:0004121,8.64e-21,95;UBERON:0000924,8.64e-21,95;UBERON:0006601,8.64e-21,95;UBERON:0002346,4.26e-20,64;UBERON:0003075,4.26e-20,64;UBERON:0007284,4.26e-20,64;UBERON:0010371,7.50e-19,73;UBERON:0001016,1.83e-18,75;UBERON:0001017,2.11e-17,73;UBERON:0000073,1.62e-15,54;UBERON:0001049,1.96e-15,52;UBERON:0005068,1.96e-15,52;UBERON:0006241,1.96e-15,52;UBERON:0007135,1.96e-15,52;UBERON:0003056,2.67e-15,49;UBERON:0000955,1.38e-12,47;UBERON:0006238,1.38e-12,47;UBERON:0002616,5.16e-12,46;UBERON:0003080,5.19e-11,40;UBERON:0002020,6.24e-11,34;UBERON:0002780,2.55e-10,39;UBERON:0001890,2.55e-10,39;UBERON:0006240,2.55e-10,39;UBERON:0002021,1.32e-09,10;UBERON:0000411,1.32e-09,10;UBERON:0001950,1.32e-09,10;UBERON:0004111,2.04e-09,122;UBERON:0003528,2.42e-08,29;UBERON:0002791,2.42e-08,29;UBERON:0001893,2.42e-08,29;UBERON:0002619,3.19e-08,17;UBERON:0000025,4.12e-08,114;UBERON:0000956,9.65e-07,21;UBERON:0001869,9.65e-07,21;UBERON:0000203,9.65e-07,21
|phase1_expression=3.36312578920067,0,0,0,0,0.16787927191189,0,0,0.422366166455,0,1.54096171402954,1.99430397488341,0.171200729931206,0.174840804837995,0,0.809901069559304,0,0.157731082679119,0.274228867211478,0,1.36069264241712,0.794327609607082,1.04479915655574,0.319984845586813,0.68822784320151,0,0,0.215471232685889,0,0.252030129759931,0.221730510655305,1.27006134691926,0.61506478758457,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,2.39203954153597,1.72340783073175,1.10128051297009,0.782391344348039,0.218025156380447,1.75748946187577,1.74986909166855,1.25987779462826,0,0.503347818173209,0,0.336093799142464,1.54355661621568,2.86533439938757,2.57836046138721,1.41621522601718,2.11596391708813,1.90149421051854,0.338844532069132,0.889294796111139,0,0,0.7104801149461,0.299600110518405,1.15265491596466,0.725827286159344,0.405017814995072,0.841299845405528,2.28520787523043,2.65042249141936,0.734944795289724,0.575072826109418,0,0,4.97980618532232,3.5329502648936,0.659431438650969,0.731901148819277,1.04182674111352,3.07101298901519,2.8138130501584,2.59757021220577,2.65165726926301,2.27794689278565,1.67759501242771,1.59025005999687,3.09843396437821,0,0,0,0,0,0,1.12355536105401,0.681721290312231,0.779358013808606,1.7666978725517,1.83096445709685,0,0,0,1.5154372870785,0.506719730950197,1.51657333504435,0.45673551887624,0.776813650941515,1.33597925158342,0.346970653532272,1.21786191324856,1.84492397804847,1.65794904607885,1.88141931417128,1.0053327306374,0.247194967734374,0.578397427679647,0,0.808834249737046,0.441683036920787,0.969750506270444,0,2.92780797011547,1.25668024088073,0.766371165625774,0.11981512450592,0.599902730993408,0.508280908292259,5.09288173976397,5.94750783664214,1.63350657746724,3.30266208365325,5.11430914660661,3.74018480207208,6.00292673350703,1.62942982160506,0.622034853050465,1.51633655060205,1.05220927943237,1.69156575851515,2.5289231487682,2.34080768746954,1.80845781402858,2.38127747029647,2.17793324484245,2.24884138943349,3.10444044886819,1.72454394346274,1.32374256117473,0.527853372491847,1.09597866213787,0.278047249225598,1.0447564995665,1.02891068203972,0.398068533636986,0,0.257347907114715,0.284163499395593,2.48550927042602,2.57978665979206,1.44049649168812,1.65721314909647,1.57411385397923,1.23413690309903,1.62773761325285,1.87791380979733,2.33530684734339,0.987359099480883,0.492502392237286,1.13496333364198,0.292399974850665,0.878200461164203,1.20785776884335,2.3131894342054,2.16099685996497,0,0,0.853153002140936,0.696710015581316,0.902072229254653,1.61346819698674,0.22237804384487,0.760902504450237,0.474529061544512,1.15289268306808,0.502670417600539,0.994782360205754,0.38992817423824,0,0.216138049874694,0.199141273254367,0.758671603812327,1.48523066392647,0,1.01825663922657,0,0.771494018793504,0.442655759869801,2.06654207171443,0.627994911365499,0.740382983530803,0,0.667380422864376,0.393117990226406,0.224862112384854,0,0.482354319504834,0.50925170356284,0.287696137450811,1.45921704097532,0.274561413188081,0,0.744281895337007,0.312037673114561,0.505157755894224,0.538192240565737,0.964887042726734,0.554259570499814,0.37898282354097,1.14075483509418,1.18821560042632,1.17345124144251,0.167506257441816,0,0.975668239288994,0.472905432318573,0.221464689648775,0.797273843287435,0.327726629431476,0.518054945597687,0,3.01582567878545,1.08781136763742,0.491764273019036,1.37968373152366,4.65596710964597,4.68846746368813,2.13115428989678,0,0.94652465824877,1.56175497718655,1.50796378412959,1.43381278771531,0.445597348164788,0.566153061577665,1.21443210502468,0.876767573733936,1.97643888973262,2.57057053137446,1.13552068166615,1.42452482933804,1.46598263418218,0.329940245945071,0,0.728341908464944,0,0.377210159511796,0,0.922305443831782,1.55056975900933,0.727067458955011,0.712994756769443,1.26414703174326,0,1.03135543248187,0.680879211507576,1.26042765821917,1.4229455216103,2.14337035031592,0.886701168211368,1.24858172321449,1.81003922662333,1.522324745573,0.23467170806371,1.0591603543191,1.54369878638473,0.32977250588296,1.45317984026315,0.603129249281559,0.477489376012546,0,0.291480836629851,4.82105785227325,0.512612642393558,0.412773735926445,0.555583582109135,0.376736914009382,0,0.457556346413045,0.509935289981566,0.559805809294632,0.552799895217695,0.954670618015114,0.949007980743406,1.01659733563424,0.648032044930808,1.25452977608681,1.9652630737156,0.539457385539283,1.1571483801547,0.523511883968059,0.259229946583586,1.24267862617385,1.12738587736838,0.747582730219894,0.165458490457098,0.388902376688095,1.42075805825504,0.844780627453891,1.29092962510329,0.781226309063701,0.943734099831398,2.41584120826006,1.15212002503146,0.948033361884535,0.405450430580328,0.616265742988964,0.77952493786677,1.07416017400489,0.39736270956253,0.360586348559907,0.886137163047463,0.605798699688886,0.533447646584999,0.504130925684203,0.292373642219257,0.384847366561318,0.350630706544707,0,1.10992976687032,2.06341870201794,1.84673078000486,1.35232715822533,0.750729901804728,1.09890974560359,0.428736758158132,2.00628841614145,3.95326289831947,4.60325236507177,6.30185064783336,4.98374228796694,3.42541259885321,7.55393897389701,6.75022500231806,5.85417564191487,3.62513927187364,3.62432218226274,0.103787347584177,1.19707462020309,0.853668028770671,1.70174701947806,0.209613162627982,0.367687016900028,0.44449345560323,1.03017528619447,0.64183841918363,0.505394423527595,0.50695859978048,0.943131706930381,0.561849044819294,0.832326981263301,0.918967503289812,0.952587382566147,0.695305955669133,0.578727661391115,0.824171801606613,1.47198920134397,1.37147700954166,1.24233064311536,0.238436189947321,0.290692833264657,0.470546902076653,0.338458431566706,0.914639864363863,1.31534855718921,0.407412341537585,0.561142271657738,0.593175090620871,0.29551344712669,0.409231043169689,0.154936841185966,0.578719832943424,1.24905288968973,0.935726433781634,0.859484216193193,0.956441660344217,2.20591419119516,0.927471342481686
|short_description=p4@Extl2
}}

Revision as of 21:59, 5 August 2015

Short description:p4@Extl2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Extl2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -62bp_to_ENSMUST00000149920_5end
EntrezGene:58193
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Extl2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.36
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.54
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.99
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.39
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.72
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.98
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.60
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D91.59
Mouse Schwann, donor2.CNhs12573.11746-123F93.10
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C11.88
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A45.09
corpus striatum, adult.CNhs10487.19-21D85.95
corpus striatum, neonate N00.CNhs11226.630-43F11.63
cortex, adult.CNhs10473.12-14D53.30
cortex, neonate N30.CNhs11107.1392-42F25.11
diencephalon, adult.CNhs10482.20-12F23.74
diencephalon, neonate N30.CNhs11201.1388-42B26.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.63
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C61.69
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C92.34
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C62.38
eyeball, neonate N01.CNhs11140.1532-43E72.18
eyeball, neonate N02.CNhs11205.1551-44G82.25
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E92.49
heart, embryo E12.CNhs11015.353-12F52.58
heart, embryo E13.CNhs11013.376-3I91.44
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E32.34
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G11.13
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G12.16
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F81.49
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I12.07
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F41.46
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C24.66
medulla oblongata, neonate N30.CNhs11200.1396-42A34.69
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.13
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C94.82
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A91.16
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I51.42
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.06
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.85
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.98
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest4.52e-2692
ectoderm-derived structure8.64e-2195
ectoderm8.64e-2195
presumptive ectoderm8.64e-2195
neurectoderm4.26e-2064
neural plate4.26e-2064
presumptive neural plate4.26e-2064
ecto-epithelium7.50e-1973
nervous system1.83e-1875
central nervous system2.11e-1773
regional part of nervous system1.62e-1554
neural tube1.96e-1552
neural rod1.96e-1552
future spinal cord1.96e-1552
neural keel1.96e-1552
pre-chordal neural plate2.67e-1549
brain1.38e-1247
future brain1.38e-1247
regional part of brain5.16e-1246
anterior neural tube5.19e-1140
gray matter6.24e-1134
regional part of forebrain2.55e-1039
forebrain2.55e-1039
future forebrain2.55e-1039
occipital lobe1.32e-0910
visual cortex1.32e-0910
neocortex1.32e-0910
anatomical conduit2.04e-09122
brain grey matter2.42e-0829
regional part of telencephalon2.42e-0829
telencephalon2.42e-0829
regional part of cerebral cortex3.19e-0817
tube4.12e-08114
cerebral cortex9.65e-0721
cerebral hemisphere9.65e-0721
pallium9.65e-0721
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