FFCP PHASE1:Mm9::chr3:116415562..116415573,-: Difference between revisions
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{{FFCP|EntrezGene=229782|HGNC=|UniProt=Q8R1T4|association_with_transcript=0bp_to_ENSMUST00000029569_5end|description=CAGE_peak_12_at_Slc35a3_5end|id=chr3:116415562..116415573,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001153,1.74e-18,1;UBERON:0001045,1.74e-18,1;UBERON:0001987,3.37e-10,2;UBERON:0003124,3.37e-10,2;UBERON:0004340,3.37e-10,2;UBERON:0001155,6.19e-10,2;UBERON:0000059,6.19e-10,2;UBERON:0000970,8.40e-09,9;UBERON:0000019,8.40e-09,9;UBERON:0000047,8.40e-09,9;UBERON:0010312,8.40e-09,9;UBERON:0004088,8.40e-09,9;UBERON:0002104,8.40e-09,9;UBERON:0001456,8.40e-09,9;UBERON:0003072,8.40e-09,9;UBERON:0004128,8.40e-09,9;UBERON:0003071,8.40e-09,9;UBERON:0001444,2.24e-07,11;UBERON:0005631,3.18e-07,3;UBERON:0000478,3.18e-07,3;UBERON:0000158,3.18e-07,3;UBERON:0000020,7.73e-07,12;UBERON:0001032,7.73e-07,12;UBERON:0004456,7.73e-07,12|phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.639969691173627,0,0,0,0.215471232685889,0,0,0.443461021310609,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.777719596297134,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182975287204819,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0.35333957451034,0.704217098883403,0,0,0,0.216491041011214,0,0,0,0,0.148442139064825,0,0.304465478312141,0,0,0,0.125666591329675,0.494389935468748,0.578397427679647,0,0,0.441683036920787,0,1.86391761218122,0,0,0.255457055208591,0,0,0,0,0,0.125654352112864,0,0.255715457330331,0,0,0,0.124406970610093,0,2.10441855886474,0,0,0,0,0,0,0.0937017245597288,2.06962696591213,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.56748166682099,0.146199987425332,0,0.134206418760372,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0.164698954724011,0.754005626400808,0,0.38992817423824,0,0.432276099749388,0.597423819763102,0,0.114248512609729,0,0.610953983535943,0.387904974335251,0.210407459670956,0.252946148497029,0.590440591918409,0.470996183524124,0.616985819609003,0.889357881261447,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0.936113019343682,0,0.179397413521912,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0.144649058581512,0,0,0,0.551873492609465,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0.164549020602121,0,0.23467170806371,4.44847348814022,0.220528398054962,0,0.161464426695906,0.0603129249281559,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,1.04544148007234,0.218362563746178,0.404593039154462,0.909188012978695,0.26175594198403,0.518459893167171,0,0,0,0,0,0.129159823477731,0,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335769232728157,0,0.187682475451182,0.549454872801795,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.44449345560323,0.618105171716683,0,0.252697211763798,0.25347929989024,0.377252682772152,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0.526139422875686,0.135804113845862,0.561142271657738,0,0,0,0,0.192906610981141,0,0,0,0,0.441182838239031,0.695603506861264|short_description=p12@Slc35a3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:229782 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8R1T4 | |||
|association_with_transcript=0bp_to_ENSMUST00000029569_5end | |||
|cluster_id=chr3:116415562..116415573,- | |||
|description=CAGE_peak_12_at_Slc35a3_5end | |||
|id=chr3:116415562..116415573,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001153,1.74e-18,1;UBERON:0001045,1.74e-18,1;UBERON:0001987,3.37e-10,2;UBERON:0003124,3.37e-10,2;UBERON:0004340,3.37e-10,2;UBERON:0001155,6.19e-10,2;UBERON:0000059,6.19e-10,2;UBERON:0000970,8.40e-09,9;UBERON:0000019,8.40e-09,9;UBERON:0000047,8.40e-09,9;UBERON:0010312,8.40e-09,9;UBERON:0004088,8.40e-09,9;UBERON:0002104,8.40e-09,9;UBERON:0001456,8.40e-09,9;UBERON:0003072,8.40e-09,9;UBERON:0004128,8.40e-09,9;UBERON:0003071,8.40e-09,9;UBERON:0001444,2.24e-07,11;UBERON:0005631,3.18e-07,3;UBERON:0000478,3.18e-07,3;UBERON:0000158,3.18e-07,3;UBERON:0000020,7.73e-07,12;UBERON:0001032,7.73e-07,12;UBERON:0004456,7.73e-07,12 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.639969691173627,0,0,0,0.215471232685889,0,0,0.443461021310609,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.777719596297134,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182975287204819,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0.35333957451034,0.704217098883403,0,0,0,0.216491041011214,0,0,0,0,0.148442139064825,0,0.304465478312141,0,0,0,0.125666591329675,0.494389935468748,0.578397427679647,0,0,0.441683036920787,0,1.86391761218122,0,0,0.255457055208591,0,0,0,0,0,0.125654352112864,0,0.255715457330331,0,0,0,0.124406970610093,0,2.10441855886474,0,0,0,0,0,0,0.0937017245597288,2.06962696591213,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.56748166682099,0.146199987425332,0,0.134206418760372,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0.164698954724011,0.754005626400808,0,0.38992817423824,0,0.432276099749388,0.597423819763102,0,0.114248512609729,0,0.610953983535943,0.387904974335251,0.210407459670956,0.252946148497029,0.590440591918409,0.470996183524124,0.616985819609003,0.889357881261447,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0.936113019343682,0,0.179397413521912,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0.144649058581512,0,0,0,0.551873492609465,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0.164549020602121,0,0.23467170806371,4.44847348814022,0.220528398054962,0,0.161464426695906,0.0603129249281559,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,1.04544148007234,0.218362563746178,0.404593039154462,0.909188012978695,0.26175594198403,0.518459893167171,0,0,0,0,0,0.129159823477731,0,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335769232728157,0,0.187682475451182,0.549454872801795,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.44449345560323,0.618105171716683,0,0.252697211763798,0.25347929989024,0.377252682772152,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0.526139422875686,0.135804113845862,0.561142271657738,0,0,0,0,0.192906610981141,0,0,0,0,0.441182838239031,0.695603506861264 | |||
|short_description=p12@Slc35a3 | |||
}} |
Revision as of 22:16, 5 August 2015
Short description: | p12@Slc35a3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Slc35a3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000029569_5end |
EntrezGene: | 229782 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
caecum | 1.74e-18 | 1 |
midgut | 1.74e-18 | 1 |
placenta | 3.37e-10 | 2 |
chorion | 3.37e-10 | 2 |
allantois | 3.37e-10 | 2 |
colon | 6.19e-10 | 2 |
large intestine | 6.19e-10 | 2 |
eye | 8.40e-09 | 9 |
camera-type eye | 8.40e-09 | 9 |
simple eye | 8.40e-09 | 9 |
immature eye | 8.40e-09 | 9 |
ocular region | 8.40e-09 | 9 |
visual system | 8.40e-09 | 9 |
face | 8.40e-09 | 9 |
optic cup | 8.40e-09 | 9 |
optic vesicle | 8.40e-09 | 9 |
eye primordium | 8.40e-09 | 9 |
subdivision of head | 2.24e-07 | 11 |
extraembryonic membrane | 3.18e-07 | 3 |
extraembryonic structure | 3.18e-07 | 3 |
membranous layer | 3.18e-07 | 3 |
sense organ | 7.73e-07 | 12 |
sensory system | 7.73e-07 | 12 |
entire sense organ system | 7.73e-07 | 12 |