FFCP PHASE1:Mm9::chr6:54516277..54516290,-: Difference between revisions
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{{FFCP|EntrezGene=69938|HGNC=|MCL_coexpression_id=1|UniProt=Q9CZC8|association_with_transcript=85bp_to_NM_027268,uc009bzw.1_5end|description=CAGE_peak_3_at_Scrn1_5end|id=chr6:54516277..54516290,-|ontology_enrichment_celltype=CL:0000221!3.73e-20!44;CL:0000133!3.73e-20!44;CL:0002319!1.88e-19!43;CL:0000055!2.63e-16!50;CL:0000540!3.10e-16!33;CL:0000047!3.10e-16!33;CL:0000031!3.10e-16!33;CL:0000404!3.10e-16!33;CL:0000117!4.56e-14!23;CL:0000337!4.56e-14!23;CL:0000393!7.80e-14!39;CL:0000211!7.80e-14!39|ontology_enrichment_celltype_v019_2=CL:0000221,2.10e-24,44;CL:0000133,2.10e-24,44;CL:0002319,1.72e-23,43;CL:0000540,4.35e-20,33;CL:0000047,4.35e-20,33;CL:0000031,4.35e-20,33;CL:0000404,4.35e-20,33;CL:0000117,4.41e-18,23;CL:0000337,4.41e-18,23;CL:0000393,3.45e-16,39;CL:0000211,3.45e-16,39;CL:0002321,2.47e-10,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!7.95e-39!75;UBERON:0001016!7.95e-39!75;UBERON:0001017!4.79e-38!73;UBERON:0005743!4.79e-38!73;UBERON:0004121!5.91e-38!102;UBERON:0000924!5.91e-38!102;UBERON:0006601!5.91e-38!102;UBERON:0002346!5.22e-35!71;UBERON:0003075!5.22e-35!71;UBERON:0007284!5.22e-35!71;UBERON:0000033!2.42e-30!63;UBERON:0001049!2.00e-28!52;UBERON:0005068!2.00e-28!52;UBERON:0006241!2.00e-28!52;UBERON:0007135!2.00e-28!52;UBERON:0000955!3.97e-27!50;UBERON:0006238!3.97e-27!50;UBERON:0002616!1.99e-26!49;UBERON:0003056!5.52e-25!49;UBERON:0003080!5.25e-21!40;UBERON:0002020!2.65e-20!34;UBERON:0002780!3.18e-20!39;UBERON:0001890!3.18e-20!39;UBERON:0006240!3.18e-20!39;UBERON:0002791!4.57e-17!29;UBERON:0003528!4.57e-17!29;UBERON:0001893!4.57e-17!29;UBERON:0007811!3.42e-14!86;UBERON:0000153!5.09e-13!94;UBERON:0000956!3.62e-12!21;UBERON:0001869!3.62e-12!21;UBERON:0000203!3.62e-12!21;UBERON:0002619!3.81e-10!17;UBERON:0003076!7.65e-08!12;UBERON:0003057!7.65e-08!12;UBERON:0002021!3.01e-07!10;UBERON:0000411!3.01e-07!10;UBERON:0001950!3.01e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.79e-49,75;UBERON:0001017,7.34e-48,73;UBERON:0004121,3.27e-47,95;UBERON:0000924,3.27e-47,95;UBERON:0006601,3.27e-47,95;UBERON:0002346,2.27e-43,64;UBERON:0003075,2.27e-43,64;UBERON:0007284,2.27e-43,64;UBERON:0010371,3.26e-38,73;UBERON:0000073,4.15e-38,54;UBERON:0001049,4.32e-36,52;UBERON:0005068,4.32e-36,52;UBERON:0006241,4.32e-36,52;UBERON:0007135,4.32e-36,52;UBERON:0003056,1.56e-32,49;UBERON:0000955,2.07e-31,47;UBERON:0006238,2.07e-31,47;UBERON:0010314,4.16e-31,92;UBERON:0002616,1.66e-30,46;UBERON:0003080,2.90e-27,40;UBERON:0002020,2.47e-26,34;UBERON:0002780,3.14e-26,39;UBERON:0001890,3.14e-26,39;UBERON:0006240,3.14e-26,39;UBERON:0003528,4.75e-22,29;UBERON:0002791,4.75e-22,29;UBERON:0001893,4.75e-22,29;UBERON:0000956,1.43e-15,21;UBERON:0001869,1.43e-15,21;UBERON:0000203,1.43e-15,21;UBERON:0002619,6.71e-13,17;UBERON:0002021,4.45e-09,10;UBERON:0000411,4.45e-09,10;UBERON:0001950,4.45e-09,10;UBERON:0003076,6.36e-09,12;UBERON:0003057,6.36e-09,12;UBERON:0002420,1.25e-07,8;UBERON:0007245,1.25e-07,8;UBERON:0010009,1.25e-07,8;UBERON:0010011,1.25e-07,8;UBERON:0000454,1.25e-07,8;UBERON:0000025,3.81e-07,114;UBERON:0004111,9.46e-07,122|phase1_expression=5.12476310735341,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0,0.782391344348039,6.97680500417429,5.71184075109627,4.86074747685709,1.67983705950435,2.87505128729943,0,0,0,2.31533492432352,0.85960031981627,0,6.67644320836673,8.46385566835253,10.775133859605,0.677689064138264,0,0,0,0,2.09720077362883,3.45796474789399,5.91030790158323,6.48028503992115,7.15104868594699,12.2829923293636,12.3686382932904,3.79721477566358,5.07980996396653,6.43453150627015,11.0115880999389,15.4501679083077,15.2070467923681,9.62769900430415,8.87430142943374,5.2091337055676,17.0301629390842,14.6318278608237,12.835052813252,9.72274332063103,12.1015928679237,10.6247684120421,1.66597625333005,3.40072020480535,0,0,0,0,0,0,0.280888840263504,0.511290967734173,0.259786004602869,0.35333957451034,13.0984380392313,0,0,0,0,0,0,0.68510327831436,0,1.7813056687779,1.21439728736295,1.52232739156071,0.461230994512117,2.11011696773672,1.99900802130698,0.753999547978053,0,0.578397427679647,0,0.323533699894818,0,0.484875253135222,0,9.36898550436951,7.12118803165747,0,0,0,0,20.9706895166752,13.2675174817402,9.29842205635197,11.6462294528825,11.2514801225345,16.2074674756457,11.0324058886075,0.712875546952214,0.248813941220186,0,1.47309299120532,4.16385417480652,5.74755261083682,5.40186389416048,4.21973489940002,6.05524842446818,6.40568601424249,4.59138450342671,5.43277078551933,0.431135985865684,1.13463648100692,0.703804496655795,0.219195732427575,0.556094498451196,0,0.205782136407943,0.59710280045548,0,0,0,0.207125772535502,0.703578179943289,0.900310307305074,0.473489471170421,0,0.462801338662135,0,0,0.467061369468678,0.16455984991348,0,0,0.292399974850665,0.219550115291051,0.402619256281115,8.62188789112922,6.38008596751563,0.330418782983798,0,1.7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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:69938 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9CZC8 | |||
|association_with_transcript=85bp_to_NM_027268,uc009bzw.1_5end | |||
|cluster_id=chr6:54516277..54516290,- | |||
|description=CAGE_peak_3_at_Scrn1_5end | |||
|id=chr6:54516277..54516290,- | |||
|ontology_enrichment_celltype=CL:0000221!3.73e-20!44;CL:0000133!3.73e-20!44;CL:0002319!1.88e-19!43;CL:0000055!2.63e-16!50;CL:0000540!3.10e-16!33;CL:0000047!3.10e-16!33;CL:0000031!3.10e-16!33;CL:0000404!3.10e-16!33;CL:0000117!4.56e-14!23;CL:0000337!4.56e-14!23;CL:0000393!7.80e-14!39;CL:0000211!7.80e-14!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.10e-24,44;CL:0000133,2.10e-24,44;CL:0002319,1.72e-23,43;CL:0000540,4.35e-20,33;CL:0000047,4.35e-20,33;CL:0000031,4.35e-20,33;CL:0000404,4.35e-20,33;CL:0000117,4.41e-18,23;CL:0000337,4.41e-18,23;CL:0000393,3.45e-16,39;CL:0000211,3.45e-16,39;CL:0002321,2.47e-10,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.95e-39!75;UBERON:0001016!7.95e-39!75;UBERON:0001017!4.79e-38!73;UBERON:0005743!4.79e-38!73;UBERON:0004121!5.91e-38!102;UBERON:0000924!5.91e-38!102;UBERON:0006601!5.91e-38!102;UBERON:0002346!5.22e-35!71;UBERON:0003075!5.22e-35!71;UBERON:0007284!5.22e-35!71;UBERON:0000033!2.42e-30!63;UBERON:0001049!2.00e-28!52;UBERON:0005068!2.00e-28!52;UBERON:0006241!2.00e-28!52;UBERON:0007135!2.00e-28!52;UBERON:0000955!3.97e-27!50;UBERON:0006238!3.97e-27!50;UBERON:0002616!1.99e-26!49;UBERON:0003056!5.52e-25!49;UBERON:0003080!5.25e-21!40;UBERON:0002020!2.65e-20!34;UBERON:0002780!3.18e-20!39;UBERON:0001890!3.18e-20!39;UBERON:0006240!3.18e-20!39;UBERON:0002791!4.57e-17!29;UBERON:0003528!4.57e-17!29;UBERON:0001893!4.57e-17!29;UBERON:0007811!3.42e-14!86;UBERON:0000153!5.09e-13!94;UBERON:0000956!3.62e-12!21;UBERON:0001869!3.62e-12!21;UBERON:0000203!3.62e-12!21;UBERON:0002619!3.81e-10!17;UBERON:0003076!7.65e-08!12;UBERON:0003057!7.65e-08!12;UBERON:0002021!3.01e-07!10;UBERON:0000411!3.01e-07!10;UBERON:0001950!3.01e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.79e-49,75;UBERON:0001017,7.34e-48,73;UBERON:0004121,3.27e-47,95;UBERON:0000924,3.27e-47,95;UBERON:0006601,3.27e-47,95;UBERON:0002346,2.27e-43,64;UBERON:0003075,2.27e-43,64;UBERON:0007284,2.27e-43,64;UBERON:0010371,3.26e-38,73;UBERON:0000073,4.15e-38,54;UBERON:0001049,4.32e-36,52;UBERON:0005068,4.32e-36,52;UBERON:0006241,4.32e-36,52;UBERON:0007135,4.32e-36,52;UBERON:0003056,1.56e-32,49;UBERON:0000955,2.07e-31,47;UBERON:0006238,2.07e-31,47;UBERON:0010314,4.16e-31,92;UBERON:0002616,1.66e-30,46;UBERON:0003080,2.90e-27,40;UBERON:0002020,2.47e-26,34;UBERON:0002780,3.14e-26,39;UBERON:0001890,3.14e-26,39;UBERON:0006240,3.14e-26,39;UBERON:0003528,4.75e-22,29;UBERON:0002791,4.75e-22,29;UBERON:0001893,4.75e-22,29;UBERON:0000956,1.43e-15,21;UBERON:0001869,1.43e-15,21;UBERON:0000203,1.43e-15,21;UBERON:0002619,6.71e-13,17;UBERON:0002021,4.45e-09,10;UBERON:0000411,4.45e-09,10;UBERON:0001950,4.45e-09,10;UBERON:0003076,6.36e-09,12;UBERON:0003057,6.36e-09,12;UBERON:0002420,1.25e-07,8;UBERON:0007245,1.25e-07,8;UBERON:0010009,1.25e-07,8;UBERON:0010011,1.25e-07,8;UBERON:0000454,1.25e-07,8;UBERON:0000025,3.81e-07,114;UBERON:0004111,9.46e-07,122 | |||
|phase1_expression=5.12476310735341,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0,0.782391344348039,6.97680500417429,5.71184075109627,4.86074747685709,1.67983705950435,2.87505128729943,0,0,0,2.31533492432352,0.85960031981627,0,6.67644320836673,8.46385566835253,10.775133859605,0.677689064138264,0,0,0,0,2.09720077362883,3.45796474789399,5.91030790158323,6.48028503992115,7.15104868594699,12.2829923293636,12.3686382932904,3.79721477566358,5.07980996396653,6.43453150627015,11.0115880999389,15.4501679083077,15.2070467923681,9.62769900430415,8.87430142943374,5.2091337055676,17.0301629390842,14.6318278608237,12.835052813252,9.72274332063103,12.1015928679237,10.6247684120421,1.66597625333005,3.40072020480535,0,0,0,0,0,0,0.280888840263504,0.511290967734173,0.259786004602869,0.35333957451034,13.0984380392313,0,0,0,0,0,0,0.68510327831436,0,1.7813056687779,1.21439728736295,1.52232739156071,0.461230994512117,2.11011696773672,1.99900802130698,0.753999547978053,0,0.578397427679647,0,0.323533699894818,0,0.484875253135222,0,9.36898550436951,7.12118803165747,0,0,0,0,20.9706895166752,13.2675174817402,9.29842205635197,11.6462294528825,11.2514801225345,16.2074674756457,11.0324058886075,0.712875546952214,0.248813941220186,0,1.47309299120532,4.16385417480652,5.74755261083682,5.40186389416048,4.21973489940002,6.05524842446818,6.40568601424249,4.59138450342671,5.43277078551933,0.431135985865684,1.13463648100692,0.703804496655795,0.219195732427575,0.556094498451196,0,0.205782136407943,0.59710280045548,0,0,0,0.207125772535502,0.703578179943289,0.900310307305074,0.473489471170421,0,0.462801338662135,0,0,0.467061369468678,0.16455984991348,0,0,0.292399974850665,0.219550115291051,0.402619256281115,8.62188789112922,6.38008596751563,0.330418782983798,0,1.70630600428187,0.464473343720877,0.902072229254653,0,0,0,0,0.658795818896044,0,0.198956472041151,0.19496408711912,0.898819408654221,0.216138049874694,0,0.379335801906163,0.114248512609729,0,1.4255592949172,0.581857461502877,0.49095073923223,0.252946148497029,0.147610147979602,0,0.246794327843601,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0.37898282354097,0,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,23.7614873181932,16.6440594960929,0,0,2.83957397474631,1.95219372148319,3.66219776145758,0.716906393857656,1.78238939265915,1.98153571552183,1.21443210502468,1.46127928955656,3.16230222357219,11.5675673911851,0.851640511249612,0.534196811001766,0.162886959353576,1.64970122972535,0,0.485561272309963,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,0.516856586336442,1.09060118843252,0,0,0,0,1.36175842301515,1.98067203434441,2.8458910432206,2.57204442037911,1.41872186913819,2.67553226403106,1.97458824722545,1.2178597964584,0.469343416127421,0.63549621259146,0.220528398054962,0.16488625294148,0.161464426695906,0.180938774784468,0,0.164140899745061,0.874442509889552,14.0923229527987,0,0,0,0,0,0,0,0,0,0,0.790839983952838,0.406638934253697,0.432021363287205,0.209088296014469,0.436725127492355,0.539457385539283,0.247960367176008,0,0.129614973291793,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0.387479470433193,0.506868376472335,1.76035857968631,1.43224823328345,1.36317147753424,0.724752362478018,0,0,0.405450430580328,0.205421914329655,0,0.358053391334963,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0.579568782096571,0.750729901804728,0.549454872801795,0.214368379079066,0,13.5540442228096,15.1907328047368,10.8850147553485,8.42080593484069,11.6464028361009,8.3093328712867,12.1504050041725,10.8077088773813,7.70342095273148,10.8729665467882,2.07574695168353,5.1873233542134,2.90247129782028,1.21553358534147,2.09613162627982,1.2869045591501,1.33348036680969,1.44224540067226,1.28367683836726,1.01078884705519,1.2673964994512,0.943131706930381,1.12369808963859,1.02440243847791,1.26358031702349,1.42888107384922,1.15884325944855,1.15745532278223,1.64834360321323,1.76638704161277,1.37147700954166,0.887379030796687,2.38436189947321,1.16277133305863,0.846984423737976,0.761531471025089,1.82927972872773,2.10455769150274,1.22223702461276,1.12228454331548,1.18635018124174,1.37906275325789,1.22769312950907,0.929621047115796,1.92906610981141,3.99696924700713,0.701794825336225,1.07435527024149,0.382576664137687,1.54413993383661,0.927471342481686 | |||
|short_description=p3@Scrn1 | |||
}} |
Revision as of 23:27, 5 August 2015
Short description: | p3@Scrn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Scrn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 85bp_to_NM_027268, uc009bzw.1_5end |
EntrezGene: | 69938 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.10e-24 | 44 |
neurectodermal cell | 2.10e-24 | 44 |
neural cell | 1.72e-23 | 43 |
neuron | 4.35e-20 | 33 |
neuronal stem cell | 4.35e-20 | 33 |
neuroblast | 4.35e-20 | 33 |
electrically signaling cell | 4.35e-20 | 33 |
CNS neuron (sensu Vertebrata) | 4.41e-18 | 23 |
neuroblast (sensu Vertebrata) | 4.41e-18 | 23 |
electrically responsive cell | 3.45e-16 | 39 |
electrically active cell | 3.45e-16 | 39 |
embryonic cell | 2.47e-10 | 70 |