FFCP PHASE1:Mm9::chr11:51671126..51671188,-: Difference between revisions
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{{FFCP|EntrezGene=76901|HGNC=|MCL_coexpression_id=7|UniProt=Q6ZQF7,A2AA59|association_with_transcript=0bp_to_ENSMUST00000020655,ENSMUST00000109090_5end|description=CAGE_peak_1_at_Phf15_5end|id=chr11:51671126..51671188,-|ontology_enrichment_celltype=CL:0000219!4.63e-13!54;CL:0002320!4.14e-10!46;CL:0000134!4.14e-10!46;CL:0000988!8.66e-09!32;CL:0002032!8.66e-09!32;CL:0000037!8.66e-09!32;CL:0000566!8.66e-09!32;CL:0000837!8.66e-09!32;CL:0000738!1.17e-08!17;CL:0002087!1.17e-08!17;CL:0002031!1.32e-08!25;CL:0000838!2.17e-07!12;CL:0000791!4.16e-07!9;CL:0000789!4.16e-07!9;CL:0002420!4.16e-07!9;CL:0002419!4.16e-07!9;CL:0000790!4.16e-07!9;CL:0000063!4.23e-07!66;CL:0000084!7.08e-07!11;CL:0000827!7.08e-07!11;CL:0000542!8.91e-07!13;CL:0000051!8.91e-07!13|ontology_enrichment_celltype_v019_2=CL:0000219,5.77e-14,54;CL:0002320,1.08e-10,46;CL:0000134,1.08e-10,46;CL:0002031,1.28e-09,25;CL:0000988,1.74e-09,32;CL:0002032,1.74e-09,32;CL:0000037,1.74e-09,32;CL:0000837,1.74e-09,32;CL:0000738,4.06e-09,17;CL:0002087,4.06e-09,17;CL:0000838,4.18e-08,12;CL:0000791,8.69e-08,9;CL:0000789,8.69e-08,9;CL:0002420,8.69e-08,9;CL:0002419,8.69e-08,9;CL:0000790,8.69e-08,9;CL:0000084,1.58e-07,11;CL:0000827,1.58e-07,11;CL:0000624,4.51e-07,8;CL:0000542,5.12e-07,13;CL:0000051,5.12e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.02e-15!45;UBERON:0003061!1.02e-15!45;UBERON:0002193!1.48e-14!48;UBERON:0003408!1.32e-11!24;UBERON:0002370!2.48e-11!23;UBERON:0000974!2.48e-11!23;UBERON:0004807!2.48e-11!23;UBERON:0005058!2.48e-11!23;UBERON:0003351!2.48e-11!23;UBERON:0009113!2.48e-11!23;UBERON:0003295!2.48e-11!23;UBERON:0009722!2.48e-11!23;UBERON:0005562!2.48e-11!23;UBERON:0007690!2.48e-11!23;UBERON:0006562!1.27e-10!24;UBERON:0001557!1.27e-10!24;UBERON:0001042!1.27e-10!24;UBERON:0008814!1.27e-10!24;UBERON:0009145!1.27e-10!24;UBERON:0003081!2.51e-10!88;UBERON:0001004!2.75e-10!42;UBERON:0004177!3.99e-10!29;UBERON:0002384!4.14e-10!46;UBERON:0000065!5.46e-10!41;UBERON:0000063!8.10e-10!35;UBERON:0002405!1.40e-09!70;UBERON:0000072!8.52e-09!27|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.02e-17,45;UBERON:0003061,1.02e-17,45;UBERON:0002193,1.79e-16,48;UBERON:0002405,1.79e-16,48;UBERON:0003408,2.47e-13,24;UBERON:0002370,4.99e-13,23;UBERON:0000974,4.99e-13,23;UBERON:0004807,4.99e-13,23;UBERON:0005058,4.99e-13,23;UBERON:0003351,4.99e-13,23;UBERON:0009113,4.99e-13,23;UBERON:0003295,4.99e-13,23;UBERON:0009722,4.99e-13,23;UBERON:0005562,4.99e-13,23;UBERON:0007690,4.99e-13,23;UBERON:0006562,5.63e-12,24;UBERON:0001557,5.63e-12,24;UBERON:0001042,5.63e-12,24;UBERON:0008814,5.63e-12,24;UBERON:0009145,5.63e-12,24;UBERON:0001004,6.33e-12,42;UBERON:0000065,1.37e-11,41;UBERON:0004177,1.91e-11,29;UBERON:0005057,1.91e-11,29;UBERON:0003081,2.60e-11,87;UBERON:0002384,1.08e-10,46;UBERON:0000072,7.11e-10,27;UBERON:0000077,1.12e-09,35;UBERON:0005911,2.86e-07,69;UBERON:0002371,4.09e-07,16;UBERON:0000926,7.41e-07,120;UBERON:0004120,7.41e-07,120;UBERON:0006603,7.41e-07,120|phase1_expression=0.640595388419176,0.697950815278722,0.454999239389536,0,0,2.35030980676646,0.934450562382103,9.8133725815598,54.06286930624,63.8996156859042,6.50628279256919,11.7265073723145,8.38883576662908,9.09172185157573,2.33176833270964,2.63217847606774,2.79824751251259,8.20201629931418,7.95263714913285,7.21462408056651,5.27268398936633,3.77305614563364,1.04479915655574,0.639969691173627,0.22940928106717,1.14846392823004,2.58457197695445,2.58565479223067,0.760093677825496,1.00812051903972,1.77384408524244,0.635030673459631,0.61506478758457,0,1.1554064790051,2.82598897109437,2.6542016314108,0.418531630736908,0,0.523523743973798,1.76469446409304,0.683045484958446,0.485510353031154,4.02869817521847,3.85232338634155,4.58866880404204,4.69434806608824,5.23260375313072,11.643367684927,7.77719596297134,6.43937539476668,4.31257693094915,7.21465206048266,12.3311564141929,10.4189077734164,3.08711323243136,2.29226751951005,3.6097046459421,0.202316460859598,0.528990979272033,0.633831403506179,4.40497891689872,0.889294796111139,17.0980946283466,14.8329954385046,15.6305625288142,5.69240209984969,2.68952813725088,0.103689612308478,0,0.210324961351382,1.42825492201902,0,0.122490799214954,0.0958454710182364,0,2.20231761998777,2.80912143787413,3.5329502648936,0.131886287730194,0.0914876436024097,0,1.95428099300967,0.56276261003168,3.36156145108982,0,0.854230084794618,0,1.51452386666368,2.72057616384428,4.92769630792852,0.860423876981386,0,1.07940638327563,1.94932925234301,1.34408066129201,2.80888840263504,2.55645483867087,2.59786004602869,2.12003744706204,0.563373679106722,5.13305909657271,5.09610479413291,0,1.08245520505607,0.506719730950197,0.505524445014783,3.08296475241462,3.6251303710604,4.75014845007439,0.867426633830679,0.913396434936424,1.15307748628029,0.452167921657868,2.11659672844269,1.0053327306374,0.741584903203122,2.60278842455841,2.65383165584962,1.7794353494215,1.76673214768315,3.39412677194655,1.86391761218122,1.46390398505774,1.8850203613211,1.788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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:76901 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q6ZQF7,uniprot:A2AA59 | |||
|association_with_transcript=0bp_to_ENSMUST00000020655,ENSMUST00000109090_5end | |||
|cluster_id=chr11:51671126..51671188,- | |||
|description=CAGE_peak_1_at_Phf15_5end | |||
|id=chr11:51671126..51671188,- | |||
|ontology_enrichment_celltype=CL:0000219!4.63e-13!54;CL:0002320!4.14e-10!46;CL:0000134!4.14e-10!46;CL:0000988!8.66e-09!32;CL:0002032!8.66e-09!32;CL:0000037!8.66e-09!32;CL:0000566!8.66e-09!32;CL:0000837!8.66e-09!32;CL:0000738!1.17e-08!17;CL:0002087!1.17e-08!17;CL:0002031!1.32e-08!25;CL:0000838!2.17e-07!12;CL:0000791!4.16e-07!9;CL:0000789!4.16e-07!9;CL:0002420!4.16e-07!9;CL:0002419!4.16e-07!9;CL:0000790!4.16e-07!9;CL:0000063!4.23e-07!66;CL:0000084!7.08e-07!11;CL:0000827!7.08e-07!11;CL:0000542!8.91e-07!13;CL:0000051!8.91e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,5.77e-14,54;CL:0002320,1.08e-10,46;CL:0000134,1.08e-10,46;CL:0002031,1.28e-09,25;CL:0000988,1.74e-09,32;CL:0002032,1.74e-09,32;CL:0000037,1.74e-09,32;CL:0000837,1.74e-09,32;CL:0000738,4.06e-09,17;CL:0002087,4.06e-09,17;CL:0000838,4.18e-08,12;CL:0000791,8.69e-08,9;CL:0000789,8.69e-08,9;CL:0002420,8.69e-08,9;CL:0002419,8.69e-08,9;CL:0000790,8.69e-08,9;CL:0000084,1.58e-07,11;CL:0000827,1.58e-07,11;CL:0000624,4.51e-07,8;CL:0000542,5.12e-07,13;CL:0000051,5.12e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.02e-15!45;UBERON:0003061!1.02e-15!45;UBERON:0002193!1.48e-14!48;UBERON:0003408!1.32e-11!24;UBERON:0002370!2.48e-11!23;UBERON:0000974!2.48e-11!23;UBERON:0004807!2.48e-11!23;UBERON:0005058!2.48e-11!23;UBERON:0003351!2.48e-11!23;UBERON:0009113!2.48e-11!23;UBERON:0003295!2.48e-11!23;UBERON:0009722!2.48e-11!23;UBERON:0005562!2.48e-11!23;UBERON:0007690!2.48e-11!23;UBERON:0006562!1.27e-10!24;UBERON:0001557!1.27e-10!24;UBERON:0001042!1.27e-10!24;UBERON:0008814!1.27e-10!24;UBERON:0009145!1.27e-10!24;UBERON:0003081!2.51e-10!88;UBERON:0001004!2.75e-10!42;UBERON:0004177!3.99e-10!29;UBERON:0002384!4.14e-10!46;UBERON:0000065!5.46e-10!41;UBERON:0000063!8.10e-10!35;UBERON:0002405!1.40e-09!70;UBERON:0000072!8.52e-09!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.02e-17,45;UBERON:0003061,1.02e-17,45;UBERON:0002193,1.79e-16,48;UBERON:0002405,1.79e-16,48;UBERON:0003408,2.47e-13,24;UBERON:0002370,4.99e-13,23;UBERON:0000974,4.99e-13,23;UBERON:0004807,4.99e-13,23;UBERON:0005058,4.99e-13,23;UBERON:0003351,4.99e-13,23;UBERON:0009113,4.99e-13,23;UBERON:0003295,4.99e-13,23;UBERON:0009722,4.99e-13,23;UBERON:0005562,4.99e-13,23;UBERON:0007690,4.99e-13,23;UBERON:0006562,5.63e-12,24;UBERON:0001557,5.63e-12,24;UBERON:0001042,5.63e-12,24;UBERON:0008814,5.63e-12,24;UBERON:0009145,5.63e-12,24;UBERON:0001004,6.33e-12,42;UBERON:0000065,1.37e-11,41;UBERON:0004177,1.91e-11,29;UBERON:0005057,1.91e-11,29;UBERON:0003081,2.60e-11,87;UBERON:0002384,1.08e-10,46;UBERON:0000072,7.11e-10,27;UBERON:0000077,1.12e-09,35;UBERON:0005911,2.86e-07,69;UBERON:0002371,4.09e-07,16;UBERON:0000926,7.41e-07,120;UBERON:0004120,7.41e-07,120;UBERON:0006603,7.41e-07,120 | |||
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| |||
|short_description=p1@Phf15 | |||
}} |
Revision as of 00:52, 6 August 2015
Short description: | p1@Phf15 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Phf15_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 0bp_to_ENSMUST00000020655, ENSMUST00000109090_5end |
EntrezGene: | 76901 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 5.77e-14 | 54 |
connective tissue cell | 1.08e-10 | 46 |
mesenchymal cell | 1.08e-10 | 46 |
hematopoietic lineage restricted progenitor cell | 1.28e-09 | 25 |
hematopoietic cell | 1.74e-09 | 32 |
hematopoietic oligopotent progenitor cell | 1.74e-09 | 32 |
hematopoietic stem cell | 1.74e-09 | 32 |
hematopoietic multipotent progenitor cell | 1.74e-09 | 32 |
leukocyte | 4.06e-09 | 17 |
nongranular leukocyte | 4.06e-09 | 17 |
lymphoid lineage restricted progenitor cell | 4.18e-08 | 12 |
mature alpha-beta T cell | 8.69e-08 | 9 |
alpha-beta T cell | 8.69e-08 | 9 |
immature T cell | 8.69e-08 | 9 |
mature T cell | 8.69e-08 | 9 |
immature alpha-beta T cell | 8.69e-08 | 9 |
T cell | 1.58e-07 | 11 |
pro-T cell | 1.58e-07 | 11 |
CD4-positive, alpha-beta T cell | 4.51e-07 | 8 |
lymphocyte | 5.12e-07 | 13 |
common lymphoid progenitor | 5.12e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.02e-17 | 45 |
blood island | 1.02e-17 | 45 |
hemolymphoid system | 1.79e-16 | 48 |
immune system | 1.79e-16 | 48 |
gland of gut | 2.47e-13 | 24 |
thymus | 4.99e-13 | 23 |
neck | 4.99e-13 | 23 |
respiratory system epithelium | 4.99e-13 | 23 |
hemolymphoid system gland | 4.99e-13 | 23 |
pharyngeal epithelium | 4.99e-13 | 23 |
thymic region | 4.99e-13 | 23 |
pharyngeal gland | 4.99e-13 | 23 |
entire pharyngeal arch endoderm | 4.99e-13 | 23 |
thymus primordium | 4.99e-13 | 23 |
early pharyngeal endoderm | 4.99e-13 | 23 |
pharynx | 5.63e-12 | 24 |
upper respiratory tract | 5.63e-12 | 24 |
chordate pharynx | 5.63e-12 | 24 |
pharyngeal arch system | 5.63e-12 | 24 |
pharyngeal region of foregut | 5.63e-12 | 24 |
respiratory system | 6.33e-12 | 42 |
respiratory tract | 1.37e-11 | 41 |
hemopoietic organ | 1.91e-11 | 29 |
immune organ | 1.91e-11 | 29 |
lateral plate mesoderm | 2.60e-11 | 87 |
connective tissue | 1.08e-10 | 46 |
segment of respiratory tract | 7.11e-10 | 27 |
mixed endoderm/mesoderm-derived structure | 1.12e-09 | 35 |
endo-epithelium | 2.86e-07 | 69 |
bone marrow | 4.09e-07 | 16 |
mesoderm | 7.41e-07 | 120 |
mesoderm-derived structure | 7.41e-07 | 120 |
presumptive mesoderm | 7.41e-07 | 120 |