FFCP PHASE1:Mm9::chr16:13940723..13940815,+: Difference between revisions
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{{FFCP|EntrezGene=93734|HGNC=|MCL_coexpression_id=11|UniProt=Q99MS3,D6REG0,E9Q4P9,D3Z6M3,D6RHR1|association_with_transcript=0bp_to_ENSMUST00000023360,ENSMUST00000124947,ENSMUST00000141971,ENSMUST00000143697,ENSMUST00000148966,NM_033564,uc007ygq.1,uc007ygr.1_5end|description=CAGE_peak_2_at_Mpv17l_5end|id=chr16:13940723..13940815,+|ontology_enrichment_celltype=CL:0000117!3.03e-07!23;CL:0000337!3.03e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.51e-07,23;CL:0000337,1.51e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.21e-16!52;UBERON:0005068!2.21e-16!52;UBERON:0006241!2.21e-16!52;UBERON:0007135!2.21e-16!52;UBERON:0001017!2.25e-15!73;UBERON:0005743!2.25e-15!73;UBERON:0000033!2.27e-15!63;UBERON:0000955!2.49e-15!50;UBERON:0006238!2.49e-15!50;UBERON:0002616!9.32e-15!49;UBERON:0000073!2.00e-14!75;UBERON:0001016!2.00e-14!75;UBERON:0002020!6.83e-14!34;UBERON:0002346!2.13e-13!71;UBERON:0003075!2.13e-13!71;UBERON:0007284!2.13e-13!71;UBERON:0004121!6.74e-13!102;UBERON:0000924!6.74e-13!102;UBERON:0006601!6.74e-13!102;UBERON:0003080!2.31e-11!40;UBERON:0002791!2.85e-11!29;UBERON:0003528!2.85e-11!29;UBERON:0001893!2.85e-11!29;UBERON:0002780!6.59e-11!39;UBERON:0001890!6.59e-11!39;UBERON:0006240!6.59e-11!39;UBERON:0003056!1.16e-10!49;UBERON:0000025!3.11e-10!114;UBERON:0004111!5.00e-10!122;UBERON:0002619!1.72e-08!17;UBERON:0000475!1.88e-08!200;UBERON:0000956!2.70e-08!21;UBERON:0001869!2.70e-08!21;UBERON:0000203!2.70e-08!21;UBERON:0005177!3.28e-08!85;UBERON:0000468!6.02e-08!333;UBERON:0002021!1.07e-07!10;UBERON:0000411!1.07e-07!10;UBERON:0001950!1.07e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.79e-18,54;UBERON:0001049,3.67e-17,52;UBERON:0005068,3.67e-17,52;UBERON:0006241,3.67e-17,52;UBERON:0007135,3.67e-17,52;UBERON:0001017,7.32e-16,73;UBERON:0001016,1.31e-14,75;UBERON:0002346,1.41e-14,64;UBERON:0003075,1.41e-14,64;UBERON:0007284,1.41e-14,64;UBERON:0002020,1.54e-14,34;UBERON:0000955,1.91e-14,47;UBERON:0006238,1.91e-14,47;UBERON:0002616,7.39e-14,46;UBERON:0010371,3.28e-13,73;UBERON:0004121,6.60e-13,95;UBERON:0000924,6.60e-13,95;UBERON:0006601,6.60e-13,95;UBERON:0003080,7.05e-12,40;UBERON:0003528,8.79e-12,29;UBERON:0002791,8.79e-12,29;UBERON:0001893,8.79e-12,29;UBERON:0002780,2.12e-11,39;UBERON:0001890,2.12e-11,39;UBERON:0006240,2.12e-11,39;UBERON:0003056,1.19e-10,49;UBERON:0002619,7.40e-09,17;UBERON:0000025,8.93e-09,114;UBERON:0000956,1.19e-08,21;UBERON:0001869,1.19e-08,21;UBERON:0000203,1.19e-08,21;UBERON:0004111,1.61e-08,122;UBERON:0002021,5.06e-08,10;UBERON:0000411,5.06e-08,10;UBERON:0001950,5.06e-08,10|phase1_expression=4.00372117761985,0,0,0.30246421130683,0,1.34303417529512,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,61.8264719398277,0,0,0.47997726838022,0.91763712426868,0.57423196411502,0.86152399231815,0.861884930743556,2.66032787238923,1.26015064879965,1.99557459589774,0,0,0,1.44425809875637,3.98963148860382,2.45003227514843,0,0,0,0,0,0,0.755380907853464,0.709638518536602,0,1.56478268869608,13.7355848519681,7.90870257844099,8.74934545834275,3.21968769738334,1.43752564364972,0,0,0,0.257259436035947,0.286533439938757,0,9.71119012126069,12.1667925232568,12.6766280701236,1.0165335962074,0.889294796111139,0.449949858640699,0,0,4.49400165777607,6.53171119046643,3.00699875694585,3.24014251996058,1.47227472945967,34.5637691128602,36.2224407160646,4.40966877173835,4.02550978276593,1.83843757322004,28.6301290598411,31.283397830871,27.3419629196113,5.93488294785872,9.88066550906024,7.29278718779464,17.588528937087,27.0126052815206,23.8365266531824,31.2306300602088,30.8946547334053,18.6399445825301,0.757261933331841,0.302286240427142,0.579728977403356,24.0918685554788,33.9985666853875,34.5410042648203,35.0879265421741,36.7382047419815,31.4595501095124,0.170430322578058,0,0,8.73229202615419,0,0,0,3.24736561516821,4.30711771307668,5.56076889516262,69.7663505083456,0,5.78924342352817,0.173485326766136,0.913396434936424,2.30615497256059,1.95939432718409,1.52865319276416,3.26733137457156,0.247194967734374,2.31358971071859,0,1.29413479957927,1.76673214768315,4.84875253135222,1.86391761218122,30.7419836862124,23.6674778699204,1.53274233125155,0,0,0,26.3631525352488,39.3450518424019,14.1989417887537,55.971431101913,59.3259861006367,33.2460871295296,32.6104938766193,0.611036183101898,2.98576729464223,5.05445516867349,17.8875577503503,0.780722657776222,0.919608417733892,1.98068342785884,3.31550599238573,2.9255694635071,2.17793324484245,2.06143794031403,12.4177617954728,0.646703978798527,0.756424320671277,1.40760899331159,1.31517439456545,1.39023624612799,6.96504333044333,3.49829631893504,0.59710280045548,0,0,0,0.621377317606506,1.17263029990548,0.36012412292203,1.42046841351126,0.590292695242212,0.462801338662135,0.465067889500816,0.804820204198858,0.350296027101508,0.658239399653922,0.820837320395476,0.56748166682099,0.292399974850665,0,0.671032093801859,61.4046649807252,18.0083071663748,0.660837565967596,0.528901133327089,1.91959425481711,0.928946687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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:93734 | |||
|HGNC= | |||
|MCL_coexpression_id=11 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q99MS3,uniprot:D6REG0,uniprot:E9Q4P9,uniprot:D3Z6M3,uniprot:D6RHR1 | |||
|association_with_transcript=0bp_to_ENSMUST00000023360,ENSMUST00000124947,ENSMUST00000141971,ENSMUST00000143697,ENSMUST00000148966,NM_033564,uc007ygq.1,uc007ygr.1_5end | |||
|cluster_id=chr16:13940723..13940815,+ | |||
|description=CAGE_peak_2_at_Mpv17l_5end | |||
|id=chr16:13940723..13940815,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.03e-07!23;CL:0000337!3.03e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.51e-07,23;CL:0000337,1.51e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.21e-16!52;UBERON:0005068!2.21e-16!52;UBERON:0006241!2.21e-16!52;UBERON:0007135!2.21e-16!52;UBERON:0001017!2.25e-15!73;UBERON:0005743!2.25e-15!73;UBERON:0000033!2.27e-15!63;UBERON:0000955!2.49e-15!50;UBERON:0006238!2.49e-15!50;UBERON:0002616!9.32e-15!49;UBERON:0000073!2.00e-14!75;UBERON:0001016!2.00e-14!75;UBERON:0002020!6.83e-14!34;UBERON:0002346!2.13e-13!71;UBERON:0003075!2.13e-13!71;UBERON:0007284!2.13e-13!71;UBERON:0004121!6.74e-13!102;UBERON:0000924!6.74e-13!102;UBERON:0006601!6.74e-13!102;UBERON:0003080!2.31e-11!40;UBERON:0002791!2.85e-11!29;UBERON:0003528!2.85e-11!29;UBERON:0001893!2.85e-11!29;UBERON:0002780!6.59e-11!39;UBERON:0001890!6.59e-11!39;UBERON:0006240!6.59e-11!39;UBERON:0003056!1.16e-10!49;UBERON:0000025!3.11e-10!114;UBERON:0004111!5.00e-10!122;UBERON:0002619!1.72e-08!17;UBERON:0000475!1.88e-08!200;UBERON:0000956!2.70e-08!21;UBERON:0001869!2.70e-08!21;UBERON:0000203!2.70e-08!21;UBERON:0005177!3.28e-08!85;UBERON:0000468!6.02e-08!333;UBERON:0002021!1.07e-07!10;UBERON:0000411!1.07e-07!10;UBERON:0001950!1.07e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.79e-18,54;UBERON:0001049,3.67e-17,52;UBERON:0005068,3.67e-17,52;UBERON:0006241,3.67e-17,52;UBERON:0007135,3.67e-17,52;UBERON:0001017,7.32e-16,73;UBERON:0001016,1.31e-14,75;UBERON:0002346,1.41e-14,64;UBERON:0003075,1.41e-14,64;UBERON:0007284,1.41e-14,64;UBERON:0002020,1.54e-14,34;UBERON:0000955,1.91e-14,47;UBERON:0006238,1.91e-14,47;UBERON:0002616,7.39e-14,46;UBERON:0010371,3.28e-13,73;UBERON:0004121,6.60e-13,95;UBERON:0000924,6.60e-13,95;UBERON:0006601,6.60e-13,95;UBERON:0003080,7.05e-12,40;UBERON:0003528,8.79e-12,29;UBERON:0002791,8.79e-12,29;UBERON:0001893,8.79e-12,29;UBERON:0002780,2.12e-11,39;UBERON:0001890,2.12e-11,39;UBERON:0006240,2.12e-11,39;UBERON:0003056,1.19e-10,49;UBERON:0002619,7.40e-09,17;UBERON:0000025,8.93e-09,114;UBERON:0000956,1.19e-08,21;UBERON:0001869,1.19e-08,21;UBERON:0000203,1.19e-08,21;UBERON:0004111,1.61e-08,122;UBERON:0002021,5.06e-08,10;UBERON:0000411,5.06e-08,10;UBERON:0001950,5.06e-08,10 | |||
|phase1_expression=4.00372117761985,0,0,0.30246421130683,0,1.34303417529512,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,61.8264719398277,0,0,0.47997726838022,0.91763712426868,0.57423196411502,0.86152399231815,0.861884930743556,2.66032787238923,1.26015064879965,1.99557459589774,0,0,0,1.44425809875637,3.98963148860382,2.45003227514843,0,0,0,0,0,0,0.755380907853464,0.709638518536602,0,1.56478268869608,13.7355848519681,7.90870257844099,8.74934545834275,3.21968769738334,1.43752564364972,0,0,0,0.257259436035947,0.286533439938757,0,9.71119012126069,12.1667925232568,12.6766280701236,1.0165335962074,0.889294796111139,0.449949858640699,0,0,4.49400165777607,6.53171119046643,3.00699875694585,3.24014251996058,1.47227472945967,34.5637691128602,36.2224407160646,4.40966877173835,4.02550978276593,1.83843757322004,28.6301290598411,31.283397830871,27.3419629196113,5.93488294785872,9.88066550906024,7.29278718779464,17.588528937087,27.0126052815206,23.8365266531824,31.2306300602088,30.8946547334053,18.6399445825301,0.757261933331841,0.302286240427142,0.579728977403356,24.0918685554788,33.9985666853875,34.5410042648203,35.0879265421741,36.7382047419815,31.4595501095124,0.170430322578058,0,0,8.73229202615419,0,0,0,3.24736561516821,4.30711771307668,5.56076889516262,69.7663505083456,0,5.78924342352817,0.173485326766136,0.913396434936424,2.30615497256059,1.95939432718409,1.52865319276416,3.26733137457156,0.247194967734374,2.31358971071859,0,1.29413479957927,1.76673214768315,4.84875253135222,1.86391761218122,30.7419836862124,23.6674778699204,1.53274233125155,0,0,0,26.3631525352488,39.3450518424019,14.1989417887537,55.971431101913,59.3259861006367,33.2460871295296,32.6104938766193,0.611036183101898,2.98576729464223,5.05445516867349,17.8875577503503,0.780722657776222,0.919608417733892,1.98068342785884,3.31550599238573,2.9255694635071,2.17793324484245,2.06143794031403,12.4177617954728,0.646703978798527,0.756424320671277,1.40760899331159,1.31517439456545,1.39023624612799,6.96504333044333,3.49829631893504,0.59710280045548,0,0,0,0.621377317606506,1.17263029990548,0.36012412292203,1.42046841351126,0.590292695242212,0.462801338662135,0.465067889500816,0.804820204198858,0.350296027101508,0.658239399653922,0.820837320395476,0.56748166682099,0.292399974850665,0,0.671032093801859,61.4046649807252,18.0083071663748,0.660837565967596,0.528901133327089,1.91959425481711,0.928946687441754,2.19074684247559,8.26902450955704,7.56085349072559,7.79925067061493,0.949058123089023,1.64698954724011,2.01068167040216,3.18330355265841,3.70431765526328,3.59527763461689,1.29682829924817,2.58883655230677,2.0863469104839,1.02823661348756,6.76246414038483,4.2766778847516,7.17624202520215,11.7126819216832,18.4650688402831,156.614367006358,317.137430239577,266.661271235011,12.7474629647474,0,0.589676985339609,0.449724224769707,0.608580364165509,0.964708639009667,3.56476192493988,8.34318798607351,4.37765112292595,4.3929826110093,7.18841032636773,6.32639611036456,7.48890415474945,15.4073115547738,26.0126249606773,27.0168371963486,9.05290631816363,0.37898282354097,1.95557971730431,2.03694102930226,2.81628297946203,5.86271901046355,4.04674189506223,4.09780660501378,3.78324345854858,3.10050565508285,3.18909537314974,6.39066927391378,4.66249451037918,4.77341893318988,0,0,13.769399644533,0.827810238914197,23.7614873181932,23.4423373184406,0,0.757412781613119,1.89304931649754,0.780877488593277,1.50796378412959,0,0.222798674082394,0.283076530788832,0.404810701674894,1.46127928955656,1.58115111178609,35.3453448063988,0.425820255624806,1.42452482933804,1.30309567482861,0.494910368917606,17.2568679841952,4.37005145078967,15.1161778482376,31.1198381597232,30.4160949667196,25.2096821314021,5.42699415653264,6.18007340111759,9.26893183800275,19.2782422340848,17.9211634577498,9.28219889233682,17.702859499197,1.26042765821917,1.16422815404479,2.14337035031592,2.48276327099183,1.96205699362278,3.29098041204242,2.13125464380219,0.23467170806371,0.21183207086382,1.98475558249466,0.32977250588296,2.58343082713449,2.65376869683886,0.835606408021955,1.80554989719567,0.874442509889552,29.2971977176605,0,3.09580301944834,0.555583582109135,0.188368457004691,0,0,0,0,0,4.77335309007557,1.10717597753397,4.87966721104437,3.34816556547584,1.88179466413022,1.74690050996942,2.83215127408124,2.39695021603474,5.49687478166462,2.72191443912765,5.59205381778233,0.56369293868419,1.19613236835183,0.992750942742586,0.388902376688095,0.904118764344118,1.18269287843545,1.87771581833206,1.8228613878153,1.46803082195995,0.241584120826006,0,0.316011120628178,0.202725215290164,0.205421914329655,0,0,0.198681354781265,0,0,0.100966449948148,0.15241361331,0,0.194915761479505,0,0,6.34845074122592,3.10780334723691,0.179427713218951,0.839423081820392,0.965947970160952,0.563047426353546,0,0.214368379079066,0,55.3456805764725,54.3183779078469,60.1540289111366,52.0715142501373,43.8452812653211,47.5898155355511,39.1513050134447,43.6811567127494,48.9393801702941,45.0451471224083,0.62272408550506,0.798049746802062,1.8780696632954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| |||
|short_description=p2@Mpv17l | |||
}} |
Revision as of 01:36, 6 August 2015
Short description: | p2@Mpv17l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Mpv17l_5end |
Coexpression cluster: | MCL_coexpression_mm9:11 |
Association with transcript: | 0bp_to_ENSMUST00000023360, ENSMUST00000124947, ENSMUST00000141971, ENSMUST00000143697, ENSMUST00000148966, NM_033564, uc007ygq.1, uc007ygr.1_5end |
EntrezGene: | 93734 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.51e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.51e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 2.79e-18 | 54 |
neural tube | 3.67e-17 | 52 |
neural rod | 3.67e-17 | 52 |
future spinal cord | 3.67e-17 | 52 |
neural keel | 3.67e-17 | 52 |
central nervous system | 7.32e-16 | 73 |
nervous system | 1.31e-14 | 75 |
neurectoderm | 1.41e-14 | 64 |
neural plate | 1.41e-14 | 64 |
presumptive neural plate | 1.41e-14 | 64 |
gray matter | 1.54e-14 | 34 |
brain | 1.91e-14 | 47 |
future brain | 1.91e-14 | 47 |
regional part of brain | 7.39e-14 | 46 |
ecto-epithelium | 3.28e-13 | 73 |
ectoderm-derived structure | 6.60e-13 | 95 |
ectoderm | 6.60e-13 | 95 |
presumptive ectoderm | 6.60e-13 | 95 |
anterior neural tube | 7.05e-12 | 40 |
brain grey matter | 8.79e-12 | 29 |
regional part of telencephalon | 8.79e-12 | 29 |
telencephalon | 8.79e-12 | 29 |
regional part of forebrain | 2.12e-11 | 39 |
forebrain | 2.12e-11 | 39 |
future forebrain | 2.12e-11 | 39 |
pre-chordal neural plate | 1.19e-10 | 49 |
regional part of cerebral cortex | 7.40e-09 | 17 |
tube | 8.93e-09 | 114 |
cerebral cortex | 1.19e-08 | 21 |
cerebral hemisphere | 1.19e-08 | 21 |
pallium | 1.19e-08 | 21 |
anatomical conduit | 1.61e-08 | 122 |
occipital lobe | 5.06e-08 | 10 |
visual cortex | 5.06e-08 | 10 |
neocortex | 5.06e-08 | 10 |