FFCP PHASE1:Mm9::chr18:69753278..69753292,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=76|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:69753278..69753292,+|id=chr18:69753278..69753292,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000956!1.36e-12!21;UBERON:0001869!1.36e-12!21;UBERON:0000203!1.36e-12!21;UBERON:0001017!1.58e-10!73;UBERON:0005743!1.58e-10!73;UBERON:0000073!4.02e-10!75;UBERON:0001016!4.02e-10!75;UBERON:0002020!4.09e-10!34;UBERON:0004121!4.81e-10!102;UBERON:0000924!4.81e-10!102;UBERON:0006601!4.81e-10!102;UBERON:0002619!7.01e-10!17;UBERON:0002791!1.37e-09!29;UBERON:0003528!1.37e-09!29;UBERON:0001893!1.37e-09!29;UBERON:0002346!3.20e-09!71;UBERON:0003075!3.20e-09!71;UBERON:0007284!3.20e-09!71;UBERON:0000033!9.94e-09!63;UBERON:0000955!2.30e-08!50;UBERON:0006238!2.30e-08!50;UBERON:0003056!3.07e-08!49;UBERON:0001049!4.36e-08!52;UBERON:0005068!4.36e-08!52;UBERON:0006241!4.36e-08!52;UBERON:0007135!4.36e-08!52;UBERON:0002616!6.41e-08!49;UBERON:0002780!2.78e-07!39;UBERON:0001890!2.78e-07!39;UBERON:0006240!2.78e-07!39;UBERON:0002021!3.02e-07!10;UBERON:0000411!3.02e-07!10;UBERON:0001950!3.02e-07!10;UBERON:0003080!3.08e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0000956,5.96e-17,21;UBERON:0001869,5.96e-17,21;UBERON:0000203,5.96e-17,21;UBERON:0003528,1.88e-13,29;UBERON:0002791,1.88e-13,29;UBERON:0001893,1.88e-13,29;UBERON:0002020,2.66e-13,34;UBERON:0002619,5.50e-12,17;UBERON:0002021,1.83e-11,10;UBERON:0000411,1.83e-11,10;UBERON:0001950,1.83e-11,10;UBERON:0002780,1.62e-08,39;UBERON:0001890,1.62e-08,39;UBERON:0006240,1.62e-08,39;UBERON:0001017,3.17e-08,73;UBERON:0003080,3.62e-08,40;UBERON:0010708,8.03e-08,8;UBERON:0001016,8.58e-08,75;UBERON:0003056,4.30e-07,49;UBERON:0000955,4.88e-07,47;UBERON:0006238,4.88e-07,47;UBERON:0002102,5.20e-07,7;UBERON:0004710,5.20e-07,7;UBERON:0005419,5.20e-07,7;UBERON:0005417,5.20e-07,7;UBERON:0005729,5.20e-07,7;UBERON:0000073,8.71e-07,54;UBERON:0002346,9.37e-07,64;UBERON:0003075,9.37e-07,64;UBERON:0007284,9.37e-07,64|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315462165358238,0.137114433605739,0,0.340173160604279,0.198581902401771,0.261199789138935,0.319984845586813,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0.125896817975577,0.101376931219515,0,0,0.872100625521786,0.878744730937887,1.55543919259427,0.279972843250725,0,0.503347818173209,0,0,0.771778308107841,0,0,0.404632921719196,0,0,0.338844532069132,0,0,0,0.7104801149461,0.599200221036809,0.384218305321555,3.11068836925433,3.10513658162888,2.52389953621658,0.571301968807607,0.441737081903227,0.979926393719632,1.24599112323707,0.919218786610021,1.10115880999389,0.766124028511126,0.768032666281217,0,0.731901148819277,0,0.279182999001381,0,0.30559649555362,0.294628585473668,1.70846016958924,1.4911955666024,0.227178579999552,0.151143120213571,0.579728977403356,0,0,0,0,0,0.561777680527007,0.681721290312231,0.259786004602869,1.06001872353102,0,0,0,0,0,0,0,0,1.29468941823586,0.742210695324124,0.346970653532272,0,0,0.150722640552623,0.587943535678524,0.628332956648377,0,0.722996784599558,1.76922110389975,0.323533699894818,0.883366073841574,0.484875253135222,0,0.878342391034642,0.83778682725382,0,0.599075622529601,0.599902730993408,0.381210681219194,0.449371918214468,1.83000241127451,1.00523481690292,2.60736480288415,2.30143911597297,0,0.811206315338788,1.01839363850316,1.24406970610093,0,0.420883711772948,0.520481771850815,0.919608417733892,1.0803727788321,0.753524089178575,0.408218994907967,1.15302348256365,0.843315521037559,0.258703370739016,1.5089759505299,0.756424320671277,2.11141348996739,1.97276159184817,3.05851974148158,2.089512999133,2.05782136407943,0.199034266818493,0,0,0,0,0.469052119962192,0.540186184383045,1.89395788468168,0.393528463494808,0.462801338662135,0.465067889500816,0.804820204198858,0.583826711835847,1.31647879930784,1.14917224855367,1.05389452409612,0.730999937126662,1.3173006917463,1.34206418760372,1.47202963994889,3.08713837137853,0,0,0,0,0.38660238396628,0,0,0.380451252225118,0,0,0.251335208800269,0.397912944082302,0.58489226135736,0,0,0.199141273254367,0.379335801906163,0.456994050438915,0,0,0.387904974335251,0.280543279561274,0.505892296994058,0.295220295959204,0,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.739012760666419,0.189491411770485,0.488894929326078,0.339490171550376,0.234690248288502,0.502518772325447,0.476087281772027,0,0.630540576424764,0.664394068946325,0.797273843287435,0.81931657357869,1.03610989119537,0.723245292907558,0,0,0,0,0.321101179975584,0.468846746368813,0.327869890753351,1.00988370881749,1.26203287766503,0.780877488593277,1.93881057959519,0.477937595905104,1.33679204449436,0.849229592366497,2.02405350837447,2.63030272120181,2.37172666767914,1.92792789853084,0.709700426041343,0.534196811001766,1.14020871547503,2.96946221350564,0,0,0,0,0.295301892880773,0,0.775284879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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=76 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr18:69753278..69753292,+ | |||
|description=CAGE_peak_at_chr18:69753278..69753292,+ | |||
|id=chr18:69753278..69753292,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000956!1.36e-12!21;UBERON:0001869!1.36e-12!21;UBERON:0000203!1.36e-12!21;UBERON:0001017!1.58e-10!73;UBERON:0005743!1.58e-10!73;UBERON:0000073!4.02e-10!75;UBERON:0001016!4.02e-10!75;UBERON:0002020!4.09e-10!34;UBERON:0004121!4.81e-10!102;UBERON:0000924!4.81e-10!102;UBERON:0006601!4.81e-10!102;UBERON:0002619!7.01e-10!17;UBERON:0002791!1.37e-09!29;UBERON:0003528!1.37e-09!29;UBERON:0001893!1.37e-09!29;UBERON:0002346!3.20e-09!71;UBERON:0003075!3.20e-09!71;UBERON:0007284!3.20e-09!71;UBERON:0000033!9.94e-09!63;UBERON:0000955!2.30e-08!50;UBERON:0006238!2.30e-08!50;UBERON:0003056!3.07e-08!49;UBERON:0001049!4.36e-08!52;UBERON:0005068!4.36e-08!52;UBERON:0006241!4.36e-08!52;UBERON:0007135!4.36e-08!52;UBERON:0002616!6.41e-08!49;UBERON:0002780!2.78e-07!39;UBERON:0001890!2.78e-07!39;UBERON:0006240!2.78e-07!39;UBERON:0002021!3.02e-07!10;UBERON:0000411!3.02e-07!10;UBERON:0001950!3.02e-07!10;UBERON:0003080!3.08e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,5.96e-17,21;UBERON:0001869,5.96e-17,21;UBERON:0000203,5.96e-17,21;UBERON:0003528,1.88e-13,29;UBERON:0002791,1.88e-13,29;UBERON:0001893,1.88e-13,29;UBERON:0002020,2.66e-13,34;UBERON:0002619,5.50e-12,17;UBERON:0002021,1.83e-11,10;UBERON:0000411,1.83e-11,10;UBERON:0001950,1.83e-11,10;UBERON:0002780,1.62e-08,39;UBERON:0001890,1.62e-08,39;UBERON:0006240,1.62e-08,39;UBERON:0001017,3.17e-08,73;UBERON:0003080,3.62e-08,40;UBERON:0010708,8.03e-08,8;UBERON:0001016,8.58e-08,75;UBERON:0003056,4.30e-07,49;UBERON:0000955,4.88e-07,47;UBERON:0006238,4.88e-07,47;UBERON:0002102,5.20e-07,7;UBERON:0004710,5.20e-07,7;UBERON:0005419,5.20e-07,7;UBERON:0005417,5.20e-07,7;UBERON:0005729,5.20e-07,7;UBERON:0000073,8.71e-07,54;UBERON:0002346,9.37e-07,64;UBERON:0003075,9.37e-07,64;UBERON:0007284,9.37e-07,64 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315462165358238,0.137114433605739,0,0.340173160604279,0.198581902401771,0.261199789138935,0.319984845586813,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0.125896817975577,0.101376931219515,0,0,0.872100625521786,0.878744730937887,1.55543919259427,0.279972843250725,0,0.503347818173209,0,0,0.771778308107841,0,0,0.404632921719196,0,0,0.338844532069132,0,0,0,0.7104801149461,0.599200221036809,0.384218305321555,3.11068836925433,3.10513658162888,2.52389953621658,0.571301968807607,0.441737081903227,0.979926393719632,1.24599112323707,0.919218786610021,1.10115880999389,0.766124028511126,0.768032666281217,0,0.731901148819277,0,0.279182999001381,0,0.30559649555362,0.294628585473668,1.70846016958924,1.4911955666024,0.227178579999552,0.151143120213571,0.579728977403356,0,0,0,0,0,0.561777680527007,0.681721290312231,0.259786004602869,1.06001872353102,0,0,0,0,0,0,0,0,1.29468941823586,0.742210695324124,0.346970653532272,0,0,0.150722640552623,0.587943535678524,0.628332956648377,0,0.722996784599558,1.76922110389975,0.323533699894818,0.883366073841574,0.484875253135222,0,0.878342391034642,0.83778682725382,0,0.599075622529601,0.599902730993408,0.381210681219194,0.449371918214468,1.83000241127451,1.00523481690292,2.60736480288415,2.30143911597297,0,0.811206315338788,1.01839363850316,1.24406970610093,0,0.420883711772948,0.520481771850815,0.919608417733892,1.0803727788321,0.753524089178575,0.408218994907967,1.15302348256365,0.843315521037559,0.258703370739016,1.5089759505299,0.756424320671277,2.11141348996739,1.97276159184817,3.05851974148158,2.089512999133,2.05782136407943,0.199034266818493,0,0,0,0,0.469052119962192,0.540186184383045,1.89395788468168,0.393528463494808,0.462801338662135,0.465067889500816,0.804820204198858,0.583826711835847,1.31647879930784,1.14917224855367,1.05389452409612,0.730999937126662,1.3173006917463,1.34206418760372,1.47202963994889,3.08713837137853,0,0,0,0,0.38660238396628,0,0,0.380451252225118,0,0,0.251335208800269,0.397912944082302,0.58489226135736,0,0,0.199141273254367,0.379335801906163,0.456994050438915,0,0,0.387904974335251,0.280543279561274,0.505892296994058,0.295220295959204,0,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.739012760666419,0.189491411770485,0.488894929326078,0.339490171550376,0.234690248288502,0.502518772325447,0.476087281772027,0,0.630540576424764,0.664394068946325,0.797273843287435,0.81931657357869,1.03610989119537,0.723245292907558,0,0,0,0,0.321101179975584,0.468846746368813,0.327869890753351,1.00988370881749,1.26203287766503,0.780877488593277,1.93881057959519,0.477937595905104,1.33679204449436,0.849229592366497,2.02405350837447,2.63030272120181,2.37172666767914,1.92792789853084,0.709700426041343,0.534196811001766,1.14020871547503,2.96946221350564,0,0,0,0,0.295301892880773,0,0.775284879504663,0,0,0,0,0,0.680879211507576,0.18006109403131,0.129358683782755,0,0.177340233642274,0.713475270408282,0.164549020602121,0.608929898229199,0.938686832254841,0.63549621259146,0.441056796109924,0.49465875882444,2.09903754704677,1.08563264870681,0.716234064018819,0.984845398470368,0.291480836629851,0.741701208042039,0.170870880797853,0.206386867963223,0,0.188368457004691,0.136694227721025,0,0.679913719975421,0.559805809294632,0.276399947608848,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0.269728692769641,0.661227645802687,0.523511883968059,0,0.621339313086926,0,0.448549638131936,0.165458490457098,0.194451188344048,0,0.168956125490778,0.469428954583016,0,0.314578033277133,0,0.864090018773596,0.316011120628178,0.202725215290164,0,0.129920822977795,0,0.198681354781265,0.120195449519969,0,0,0,0,0.194915761479505,0,0.233753804363138,0.226730383615211,0,0.0897138566094757,0,0,0.750729901804728,1.28206136987086,0.428736758158132,0,6.21227026878773,5.9842280745933,2.29158205375759,4.64003592327956,2.05524755931193,6.0431511791176,0.675022500231806,3.15224842256954,1.81256963593682,2.07104124700728,1.24544817101012,1.19707462020309,0.853668028770671,0.486213434136588,1.04806581313991,1.2869045591501,1.55572709461131,1.03017528619447,0.64183841918363,1.51618327058278,0.760437899670719,1.50901073108861,1.21733959710847,0.832326981263301,1.49332219284595,0.952587382566147,0.695305955669133,0.77163688185482,0,0.588795680537589,1.02860775715625,0.887379030796687,0.476872379894642,0.436039249896986,1.88218760830661,1.4384483341585,0.914639864363863,0.789209134313529,0.950628796921032,0.561142271657738,1.18635018124174,1.67457620038458,1.22769312950907,1.08455788830176,0.385813221962283,0.999242311751784,1.40358965067245,0.859484216193193,2.10417165275728,0.441182838239031,2.08681052058379 | |||
|short_description=p@chr18:69753278..69753292,+ | |||
}} |
Latest revision as of 02:21, 6 August 2015
Short description: | p@chr18:69753278..69753292, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:69753278..69753292, + |
Coexpression cluster: | MCL_coexpression_mm9:76 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 5.96e-17 | 21 |
cerebral hemisphere | 5.96e-17 | 21 |
pallium | 5.96e-17 | 21 |
brain grey matter | 1.88e-13 | 29 |
regional part of telencephalon | 1.88e-13 | 29 |
telencephalon | 1.88e-13 | 29 |
gray matter | 2.66e-13 | 34 |
regional part of cerebral cortex | 5.50e-12 | 17 |
occipital lobe | 1.83e-11 | 10 |
visual cortex | 1.83e-11 | 10 |
neocortex | 1.83e-11 | 10 |
regional part of forebrain | 1.62e-08 | 39 |
forebrain | 1.62e-08 | 39 |
future forebrain | 1.62e-08 | 39 |
central nervous system | 3.17e-08 | 73 |
anterior neural tube | 3.62e-08 | 40 |
pectoral complex | 8.03e-08 | 8 |
nervous system | 8.58e-08 | 75 |
pre-chordal neural plate | 4.30e-07 | 49 |
brain | 4.88e-07 | 47 |
future brain | 4.88e-07 | 47 |
forelimb | 5.20e-07 | 7 |
pectoral appendage | 5.20e-07 | 7 |
pectoral appendage bud | 5.20e-07 | 7 |
forelimb bud | 5.20e-07 | 7 |
forelimb/pectoral fin field | 5.20e-07 | 7 |
regional part of nervous system | 8.71e-07 | 54 |
neurectoderm | 9.37e-07 | 64 |
neural plate | 9.37e-07 | 64 |
presumptive neural plate | 9.37e-07 | 64 |