FFCP PHASE1:Mm9::chr6:72047555..72047624,+: Difference between revisions
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{{FFCP|EntrezGene=20454|HGNC=|MCL_coexpression_id=704|UniProt=O88829|association_with_transcript=0bp_to_ENSMUST00000069994,ENSMUST00000114112,NM_001035228,NM_011375,uc009chy.1,uc009chz.1_5end|description=CAGE_peak_1_at_St3gal5_5end|id=chr6:72047555..72047624,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000025!4.96e-13!114;UBERON:0002107!1.28e-11!22;UBERON:0007499!1.28e-11!22;UBERON:0006925!1.28e-11!22;UBERON:0009497!1.28e-11!22;UBERON:0000015!1.28e-11!22;UBERON:0002423!1.28e-11!22;UBERON:0006235!1.28e-11!22;UBERON:0008835!1.28e-11!22;UBERON:0003894!1.28e-11!22;UBERON:0004161!1.28e-11!22;UBERON:0008836!1.28e-11!22;UBERON:0009854!2.07e-11!23;UBERON:0009856!2.07e-11!23;UBERON:0004111!2.64e-11!122;UBERON:0002365!1.57e-09!25;UBERON:0002330!1.57e-09!25;UBERON:0001017!7.48e-09!73;UBERON:0005743!7.48e-09!73;UBERON:0000073!7.99e-09!75;UBERON:0001016!7.99e-09!75;UBERON:0001049!8.62e-09!52;UBERON:0005068!8.62e-09!52;UBERON:0006241!8.62e-09!52;UBERON:0007135!8.62e-09!52;UBERON:0005256!8.63e-09!47;UBERON:0000955!8.67e-09!50;UBERON:0006238!8.67e-09!50;UBERON:0002616!1.75e-08!49;UBERON:0005172!3.23e-08!49;UBERON:0005173!3.23e-08!49;UBERON:0002417!3.23e-08!49;UBERON:0000916!3.23e-08!49;UBERON:0002020!7.51e-08!34;UBERON:0002346!8.29e-08!71;UBERON:0003075!8.29e-08!71;UBERON:0007284!8.29e-08!71;UBERON:0002791!7.37e-07!29;UBERON:0003528!7.37e-07!29;UBERON:0001893!7.37e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0000025,4.93e-13,114;UBERON:0002107,1.28e-11,22;UBERON:0007499,1.28e-11,22;UBERON:0006925,1.28e-11,22;UBERON:0009497,1.28e-11,22;UBERON:0000015,1.28e-11,22;UBERON:0002423,1.28e-11,22;UBERON:0006235,1.28e-11,22;UBERON:0008835,1.28e-11,22;UBERON:0003894,1.28e-11,22;UBERON:0004161,1.28e-11,22;UBERON:0008836,1.28e-11,22;UBERON:0009854,2.06e-11,23;UBERON:0009856,2.06e-11,23;UBERON:0004111,2.63e-11,122;UBERON:0000073,1.56e-09,54;UBERON:0002365,1.57e-09,25;UBERON:0002330,1.57e-09,25;UBERON:0005256,6.45e-09,45;UBERON:0001017,7.45e-09,73;UBERON:0001016,7.96e-09,75;UBERON:0001049,8.59e-09,52;UBERON:0005068,8.59e-09,52;UBERON:0006241,8.59e-09,52;UBERON:0007135,8.59e-09,52;UBERON:0005172,3.22e-08,49;UBERON:0005173,3.22e-08,49;UBERON:0002417,3.22e-08,49;UBERON:0000916,3.22e-08,49;UBERON:0002020,7.49e-08,34;UBERON:0000955,1.11e-07,47;UBERON:0006238,1.11e-07,47;UBERON:0002616,2.18e-07,46;UBERON:0003528,7.35e-07,29;UBERON:0002791,7.35e-07,29;UBERON:0001893,7.35e-07,29|phase1_expression=24.5027736070335,0,0.454999239389536,0,0,0,0,1.93684985162364,0.985521055061667,1.63845168425395,0.513653904676515,0.0797721589953364,0.684802919724823,0.437102012094987,150.898722102495,216.851011374504,265.133951810568,5.8360500591274,5.89592064504677,16.9755860719212,25.6830736256231,6.25532992565577,4.96279599363977,1.27993938234725,1.60586496747019,0.57423196411502,0,0,0.380046838912748,0,0,17.14582818341,23.9875267157982,31.6963362030877,0,0,0,51.8979222113766,32.0347491254758,41.3583757739301,73.5289360038768,70.3536849507199,72.3410426016419,15.8629990649227,16.0175551326833,22.5762505158868,13.3006528539167,30.9595722060234,38.4450819785326,56.5791006306165,20.857976822179,38.8131923785423,6.71130424230945,1.45072428402269,0,10.8048963135098,23.4957420749781,55.6925859659638,28.5266209812033,20.1016572123373,34.8607271928399,11.8595586224196,18.6751907183339,59.3933813405723,33.6214563272771,46.1812074714965,21.8708080678435,21.9004434033286,27.2703680371296,29.9713183096353,27.1319200143283,46.2754594734162,43.5111025674679,16.7812394924487,17.6355666673555,15.6267193723704,52.8556228797066,81.0814596840942,65.4363831671597,28.8830970129125,27.7207560115301,21.8783615633839,62.5369917763093,53.4624479530096,56.0769569340893,43.3104020646292,35.7352918805748,37.2798891650601,18.7043697532965,31.6644836847431,70.7269352432094,61.0900952656784,55.0776780303278,34.5410042648203,72.1251823366913,60.4836297581403,43.8186590811066,28.6322941931137,29.615604524727,35.6872970255444,25.9151892389092,50.047326191584,50.9610479413291,35.5533351576666,15.5873549528074,12.6679932737549,17.1878311305026,34.5977155548752,6.73238497482646,119.941248364378,28.2781082628801,51.759131313064,56.0395658332222,54.712318520602,50.5631440683531,131.195921348181,16.0676729027343,12.1463459812726,99.0763818183859,48.0447544343805,88.7782904210782,70.3069117046072,27.9587641827183,87.5414583064526,99.2777390295777,2.29911349687732,4.31334448221313,1.79970819298022,3.17675567682662,51.3781893158542,65.4225862030636,19.3507702253811,80.3068359288317,72.8789053391442,62.5442014124276,62.6251275441545,10.0820970211813,64.6916247172484,1.26361379216837,7.36546495602659,7.93734702072493,7.81667155073808,12.4242869565691,13.7141384230501,14.2876648217788,13.4519406299092,17.4285207681096,16.815719098036,7.32931175971664,9.26619792822314,7.03804496655795,11.3981780862339,6.39508673218875,11.8405736617537,9.67176041117334,10.5488161413801,0.70221318731323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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20454 | |||
|HGNC= | |||
|MCL_coexpression_id=704 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O88829 | |||
|association_with_transcript=0bp_to_ENSMUST00000069994,ENSMUST00000114112,NM_001035228,NM_011375,uc009chy.1,uc009chz.1_5end | |||
|cluster_id=chr6:72047555..72047624,+ | |||
|description=CAGE_peak_1_at_St3gal5_5end | |||
|id=chr6:72047555..72047624,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!4.96e-13!114;UBERON:0002107!1.28e-11!22;UBERON:0007499!1.28e-11!22;UBERON:0006925!1.28e-11!22;UBERON:0009497!1.28e-11!22;UBERON:0000015!1.28e-11!22;UBERON:0002423!1.28e-11!22;UBERON:0006235!1.28e-11!22;UBERON:0008835!1.28e-11!22;UBERON:0003894!1.28e-11!22;UBERON:0004161!1.28e-11!22;UBERON:0008836!1.28e-11!22;UBERON:0009854!2.07e-11!23;UBERON:0009856!2.07e-11!23;UBERON:0004111!2.64e-11!122;UBERON:0002365!1.57e-09!25;UBERON:0002330!1.57e-09!25;UBERON:0001017!7.48e-09!73;UBERON:0005743!7.48e-09!73;UBERON:0000073!7.99e-09!75;UBERON:0001016!7.99e-09!75;UBERON:0001049!8.62e-09!52;UBERON:0005068!8.62e-09!52;UBERON:0006241!8.62e-09!52;UBERON:0007135!8.62e-09!52;UBERON:0005256!8.63e-09!47;UBERON:0000955!8.67e-09!50;UBERON:0006238!8.67e-09!50;UBERON:0002616!1.75e-08!49;UBERON:0005172!3.23e-08!49;UBERON:0005173!3.23e-08!49;UBERON:0002417!3.23e-08!49;UBERON:0000916!3.23e-08!49;UBERON:0002020!7.51e-08!34;UBERON:0002346!8.29e-08!71;UBERON:0003075!8.29e-08!71;UBERON:0007284!8.29e-08!71;UBERON:0002791!7.37e-07!29;UBERON:0003528!7.37e-07!29;UBERON:0001893!7.37e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,4.93e-13,114;UBERON:0002107,1.28e-11,22;UBERON:0007499,1.28e-11,22;UBERON:0006925,1.28e-11,22;UBERON:0009497,1.28e-11,22;UBERON:0000015,1.28e-11,22;UBERON:0002423,1.28e-11,22;UBERON:0006235,1.28e-11,22;UBERON:0008835,1.28e-11,22;UBERON:0003894,1.28e-11,22;UBERON:0004161,1.28e-11,22;UBERON:0008836,1.28e-11,22;UBERON:0009854,2.06e-11,23;UBERON:0009856,2.06e-11,23;UBERON:0004111,2.63e-11,122;UBERON:0000073,1.56e-09,54;UBERON:0002365,1.57e-09,25;UBERON:0002330,1.57e-09,25;UBERON:0005256,6.45e-09,45;UBERON:0001017,7.45e-09,73;UBERON:0001016,7.96e-09,75;UBERON:0001049,8.59e-09,52;UBERON:0005068,8.59e-09,52;UBERON:0006241,8.59e-09,52;UBERON:0007135,8.59e-09,52;UBERON:0005172,3.22e-08,49;UBERON:0005173,3.22e-08,49;UBERON:0002417,3.22e-08,49;UBERON:0000916,3.22e-08,49;UBERON:0002020,7.49e-08,34;UBERON:0000955,1.11e-07,47;UBERON:0006238,1.11e-07,47;UBERON:0002616,2.18e-07,46;UBERON:0003528,7.35e-07,29;UBERON:0002791,7.35e-07,29;UBERON:0001893,7.35e-07,29 | |||
|phase1_expression=24.5027736070335,0,0.454999239389536,0,0,0,0,1.93684985162364,0.985521055061667,1.63845168425395,0.513653904676515,0.0797721589953364,0.684802919724823,0.437102012094987,150.898722102495,216.851011374504,265.133951810568,5.8360500591274,5.89592064504677,16.9755860719212,25.6830736256231,6.25532992565577,4.96279599363977,1.27993938234725,1.60586496747019,0.57423196411502,0,0,0.380046838912748,0,0,17.14582818341,23.9875267157982,31.6963362030877,0,0,0,51.8979222113766,32.0347491254758,41.3583757739301,73.5289360038768,70.3536849507199,72.3410426016419,15.8629990649227,16.0175551326833,22.5762505158868,13.3006528539167,30.9595722060234,38.4450819785326,56.5791006306165,20.857976822179,38.8131923785423,6.71130424230945,1.45072428402269,0,10.8048963135098,23.4957420749781,55.6925859659638,28.5266209812033,20.1016572123373,34.8607271928399,11.8595586224196,18.6751907183339,59.3933813405723,33.6214563272771,46.1812074714965,21.8708080678435,21.9004434033286,27.2703680371296,29.9713183096353,27.1319200143283,46.2754594734162,43.5111025674679,16.7812394924487,17.6355666673555,15.6267193723704,52.8556228797066,81.0814596840942,65.4363831671597,28.8830970129125,27.7207560115301,21.8783615633839,62.5369917763093,53.4624479530096,56.0769569340893,43.3104020646292,35.7352918805748,37.2798891650601,18.7043697532965,31.6644836847431,70.7269352432094,61.0900952656784,55.0776780303278,34.5410042648203,72.1251823366913,60.4836297581403,43.8186590811066,28.6322941931137,29.615604524727,35.6872970255444,25.9151892389092,50.047326191584,50.9610479413291,35.5533351576666,15.5873549528074,12.6679932737549,17.1878311305026,34.5977155548752,6.73238497482646,119.941248364378,28.2781082628801,51.759131313064,56.0395658332222,54.712318520602,50.5631440683531,131.195921348181,16.0676729027343,12.1463459812726,99.0763818183859,48.0447544343805,88.7782904210782,70.3069117046072,27.9587641827183,87.5414583064526,99.2777390295777,2.29911349687732,4.31334448221313,1.79970819298022,3.17675567682662,51.3781893158542,65.4225862030636,19.3507702253811,80.3068359288317,72.8789053391442,62.5442014124276,62.6251275441545,10.0820970211813,64.6916247172484,1.26361379216837,7.36546495602659,7.93734702072493,7.81667155073808,12.4242869565691,13.7141384230501,14.2876648217788,13.4519406299092,17.4285207681096,16.815719098036,7.32931175971664,9.26619792822314,7.03804496655795,11.3981780862339,6.39508673218875,11.8405736617537,9.67176041117334,10.5488161413801,0.702213187313235,0.772043721344145,0.284163499395593,16.1558102577691,17.3549284386011,14.5850269783422,16.0986420197943,12.9864392953287,15.1181770629631,15.1147064087765,19.5839583021722,17.8650973821769,20.4054213892716,12.4767272700112,25.0502621496694,27.0469976736865,32.4934170630755,50.9984391289413,63.2972745178023,35.5020912708531,1.65209391491899,2.64450566663544,7.89166526980366,5.80591679651096,5.7990357594942,5.44545516483025,13.1203045868473,21.4954957507192,4.2707615539006,30.139908714494,49.7643713424534,50.7339003704935,55.3698007418301,3.59527763461689,2.37751854862164,2.58883655230677,10.0523987505133,13.8240700257772,6.76246414038483,10.386217720111,9.69762435838129,7.925347647606,9.10606134589305,5.01874503130647,7.06494275286187,6.54004968785543,76.4847777884844,84.9241588094919,111.645509224299,147.059821499694,159.448055411363,162.553405673129,147.173742329661,150.752776024225,113.170388288975,87.3105293938099,54.6319184803947,58.7982697316235,66.776062046516,53.2941432468406,67.0946326571952,49.2092391790635,21.0618636789929,9.66406200029472,8.96307370431142,6.28056817368196,11.7345124144251,17.5881570313907,26.6608877792335,40.3926651065644,22.0689201748667,25.0255099303116,27.1073106717728,24.0879072632135,32.1194066270566,30.2316532435359,48.2532108605671,110.956759499017,5.90117127622843,2.48343071674259,54.7477511858371,48.6428499357643,17.2131692645509,66.6523247819545,15.7754109708128,17.1793047490521,17.6647186140895,21.9851294116348,22.057068734157,30.8553418559827,16.5972387686707,18.704374906324,12.6492088942888,54.6246237917072,42.0142652216475,15.8478387263857,14.4969393824683,11.3829384851049,6.63725691699814,7.52619972080442,9.67435382287203,8.11001842950362,8.26845300066164,8.9156192903739,26.6181141963268,11.6330793432802,8.91243445961803,3.16036757935816,3.16255825724996,9.28219889233682,38.469675450178,12.784337676223,9.31382523235832,14.1462443120851,18.2660440651542,16.7666688545946,18.7585883486418,19.4857567433344,11.7335854031855,12.921756322693,3.08739757276947,9.23363016472288,7.75029248140347,5.12659861889325,3.81991500810037,5.41664969158702,10.7847909553045,66.7531087237835,110.724330757009,21.8770080041016,51.6692731361496,142.029816581537,122.478028038039,161.059833937392,5.26933132980952,3.63873776041511,5.94259887359022,21.9574242143476,6.64305586520384,9.14937602070819,9.07244862903131,7.73626695253534,10.9181281873089,13.7561633312517,15.2082358534618,21.2022313007064,107.71004280548,35.4163408459548,16.3470952218415,18.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| |||
|short_description=p1@St3gal5 | |||
}} |
Revision as of 02:21, 6 August 2015
Short description: | p1@St3gal5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_St3gal5_5end |
Coexpression cluster: | MCL_coexpression_mm9:704 |
Association with transcript: | 0bp_to_ENSMUST00000069994, ENSMUST00000114112, NM_001035228, NM_011375, uc009chy.1, uc009chz.1_5end |
EntrezGene: | 20454 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tube | 4.93e-13 | 114 |
liver | 1.28e-11 | 22 |
epithelial sac | 1.28e-11 | 22 |
digestive gland | 1.28e-11 | 22 |
epithelium of foregut-midgut junction | 1.28e-11 | 22 |
anatomical boundary | 1.28e-11 | 22 |
hepatobiliary system | 1.28e-11 | 22 |
foregut-midgut junction | 1.28e-11 | 22 |
hepatic diverticulum | 1.28e-11 | 22 |
liver primordium | 1.28e-11 | 22 |
septum transversum | 1.28e-11 | 22 |
liver bud | 1.28e-11 | 22 |
digestive tract diverticulum | 2.06e-11 | 23 |
sac | 2.06e-11 | 23 |
anatomical conduit | 2.63e-11 | 122 |
regional part of nervous system | 1.56e-09 | 54 |
exocrine gland | 1.57e-09 | 25 |
exocrine system | 1.57e-09 | 25 |
trunk mesenchyme | 6.45e-09 | 45 |
central nervous system | 7.45e-09 | 73 |
nervous system | 7.96e-09 | 75 |
neural tube | 8.59e-09 | 52 |
neural rod | 8.59e-09 | 52 |
future spinal cord | 8.59e-09 | 52 |
neural keel | 8.59e-09 | 52 |
abdomen element | 3.22e-08 | 49 |
abdominal segment element | 3.22e-08 | 49 |
abdominal segment of trunk | 3.22e-08 | 49 |
abdomen | 3.22e-08 | 49 |
gray matter | 7.49e-08 | 34 |
brain | 1.11e-07 | 47 |
future brain | 1.11e-07 | 47 |
regional part of brain | 2.18e-07 | 46 |
brain grey matter | 7.35e-07 | 29 |
regional part of telencephalon | 7.35e-07 | 29 |
telencephalon | 7.35e-07 | 29 |