FFCP PHASE1:Mm9::chr6:78416506..78416522,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=219|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:78416506..78416522,-|id=chr6:78416506..78416522,-|ontology_enrichment_celltype=CL:0000239!5.28e-23!6;CL:0000677!5.28e-23!6;CL:0000212!5.28e-23!6;CL:0000584!5.28e-23!6;CL:0000075!1.18e-19!7;CL:0002563!3.48e-15!9;CL:0002251!3.48e-15!9;CL:0000066!3.82e-14!25;CL:0000473!4.98e-13!3;CL:0000627!4.98e-13!3;CL:0000682!4.98e-13!3;CL:0002076!7.90e-12!15;CL:0000223!1.14e-08!20|ontology_enrichment_celltype_v019_2=CL:0000682,3.91e-21,3;CL:0000239,4.10e-18,6;CL:0000677,4.10e-18,6;CL:0000584,4.10e-18,6;CL:0000075,1.41e-15,7;CL:0000066,9.04e-13,25;CL:0002563,3.47e-12,9;CL:0002251,3.47e-12,9;CL:0000473,2.08e-09,7;CL:0002076,2.07e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!5.28e-36!15;UBERON:0001242!5.65e-29!13;UBERON:0000060!5.65e-29!13;UBERON:0001262!5.65e-29!13;UBERON:0004786!5.65e-29!13;UBERON:0004923!9.85e-22!24;UBERON:0000160!1.50e-15!43;UBERON:0003350!3.48e-15!9;UBERON:0004808!3.48e-15!9;UBERON:0001277!3.48e-15!9;UBERON:0000331!2.61e-13!3;UBERON:0002116!2.61e-13!3;UBERON:0001204!2.61e-13!3;UBERON:0001168!2.61e-13!3;UBERON:0000485!2.46e-12!11;UBERON:0005409!1.21e-10!59;UBERON:0001962!7.88e-09!2;UBERON:0001961!7.88e-09!2;UBERON:0001744!7.88e-09!2|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.15e-28,15;UBERON:0001242,3.44e-25,13;UBERON:0001262,3.44e-25,13;UBERON:0004786,3.44e-25,13;UBERON:0000331,1.30e-21,3;UBERON:0002116,1.30e-21,3;UBERON:0001204,1.30e-21,3;UBERON:0001168,1.30e-21,3;UBERON:0004923,1.56e-17,24;UBERON:0000160,6.98e-17,31;UBERON:0002108,2.23e-16,4;UBERON:0003350,3.47e-12,9;UBERON:0004808,3.47e-12,9;UBERON:0001277,3.47e-12,9;UBERON:0005409,7.50e-11,47;UBERON:0000485,5.07e-10,11;UBERON:0003199,3.50e-08,1|phase1_expression=0,1.39590163055744,5.91499011206397,0.30246421130683,1.00179145989269,0.33575854382378,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,2.75291137280604,5.16808767703518,1.7230479846363,3.44753972297422,6.27077284206034,1.76421090831952,9.5344119581781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,1.58670339998127,0,0,0,0,0,0,0.949058123089023,0,0,0,0,1.79763881730844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr6:78416506..78416522,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=219 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:78416506..78416522,- | |||
|description=CAGE_peak_at_chr6:78416506..78416522,- | |||
|id=chr6:78416506..78416522,- | |||
|ontology_enrichment_celltype=CL:0000239!5.28e-23!6;CL:0000677!5.28e-23!6;CL:0000212!5.28e-23!6;CL:0000584!5.28e-23!6;CL:0000075!1.18e-19!7;CL:0002563!3.48e-15!9;CL:0002251!3.48e-15!9;CL:0000066!3.82e-14!25;CL:0000473!4.98e-13!3;CL:0000627!4.98e-13!3;CL:0000682!4.98e-13!3;CL:0002076!7.90e-12!15;CL:0000223!1.14e-08!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,3.91e-21,3;CL:0000239,4.10e-18,6;CL:0000677,4.10e-18,6;CL:0000584,4.10e-18,6;CL:0000075,1.41e-15,7;CL:0000066,9.04e-13,25;CL:0002563,3.47e-12,9;CL:0002251,3.47e-12,9;CL:0000473,2.08e-09,7;CL:0002076,2.07e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.28e-36!15;UBERON:0001242!5.65e-29!13;UBERON:0000060!5.65e-29!13;UBERON:0001262!5.65e-29!13;UBERON:0004786!5.65e-29!13;UBERON:0004923!9.85e-22!24;UBERON:0000160!1.50e-15!43;UBERON:0003350!3.48e-15!9;UBERON:0004808!3.48e-15!9;UBERON:0001277!3.48e-15!9;UBERON:0000331!2.61e-13!3;UBERON:0002116!2.61e-13!3;UBERON:0001204!2.61e-13!3;UBERON:0001168!2.61e-13!3;UBERON:0000485!2.46e-12!11;UBERON:0005409!1.21e-10!59;UBERON:0001962!7.88e-09!2;UBERON:0001961!7.88e-09!2;UBERON:0001744!7.88e-09!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.15e-28,15;UBERON:0001242,3.44e-25,13;UBERON:0001262,3.44e-25,13;UBERON:0004786,3.44e-25,13;UBERON:0000331,1.30e-21,3;UBERON:0002116,1.30e-21,3;UBERON:0001204,1.30e-21,3;UBERON:0001168,1.30e-21,3;UBERON:0004923,1.56e-17,24;UBERON:0000160,6.98e-17,31;UBERON:0002108,2.23e-16,4;UBERON:0003350,3.47e-12,9;UBERON:0004808,3.47e-12,9;UBERON:0001277,3.47e-12,9;UBERON:0005409,7.50e-11,47;UBERON:0000485,5.07e-10,11;UBERON:0003199,3.50e-08,1 | |||
|phase1_expression=0,1.39590163055744,5.91499011206397,0.30246421130683,1.00179145989269,0.33575854382378,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,2.75291137280604,5.16808767703518,1.7230479846363,3.44753972297422,6.27077284206034,1.76421090831952,9.5344119581781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,1.58670339998127,0,0,0,0,0,0,0.949058123089023,0,0,0,0,1.79763881730844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:78416506..78416522,- | |||
}} |
Latest revision as of 03:41, 6 August 2015
Short description: | p@chr6:78416506..78416522, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:78416506..78416522, - |
Coexpression cluster: | MCL_coexpression_mm9:219 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 3.91e-21 | 3 |
brush border epithelial cell | 4.10e-18 | 6 |
gut absorptive cell | 4.10e-18 | 6 |
enterocyte | 4.10e-18 | 6 |
columnar/cuboidal epithelial cell | 1.41e-15 | 7 |
epithelial cell | 9.04e-13 | 25 |
intestinal epithelial cell | 3.47e-12 | 9 |
epithelial cell of alimentary canal | 3.47e-12 | 9 |
defensive cell | 2.08e-09 | 7 |
endo-epithelial cell | 2.07e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.15e-28 | 15 |
intestinal mucosa | 3.44e-25 | 13 |
wall of intestine | 3.44e-25 | 13 |
gastrointestinal system mucosa | 3.44e-25 | 13 |
ileal mucosa | 1.30e-21 | 3 |
ileum | 1.30e-21 | 3 |
mucosa of small intestine | 1.30e-21 | 3 |
wall of small intestine | 1.30e-21 | 3 |
organ component layer | 1.56e-17 | 24 |
intestine | 6.98e-17 | 31 |
small intestine | 2.23e-16 | 4 |
epithelium of mucosa | 3.47e-12 | 9 |
gastrointestinal system epithelium | 3.47e-12 | 9 |
intestinal epithelium | 3.47e-12 | 9 |
gastrointestinal system | 7.50e-11 | 47 |
simple columnar epithelium | 5.07e-10 | 11 |
egg chamber | 3.50e-08 | 1 |