Personal tools

FFCP PHASE1:Mm9::chrX:160839338..160839364,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
Line 1: Line 1:
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=98|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:160839338..160839364,+|id=chrX:160839338..160839364,+|ontology_enrichment_celltype=CL:0000680!9.59e-13!6;CL:0000183!9.59e-13!6;CL:0000187!9.59e-13!6;CL:0000056!9.59e-13!6;CL:0000222!7.33e-11!7;CL:0000192!6.54e-10!3;CL:0000359!6.54e-10!3;CL:0002539!6.54e-10!3;CL:0000514!6.54e-10!3;CL:0000355!2.40e-08!9|ontology_enrichment_celltype_v019_2=CL:0000680,5.38e-44,6;CL:0000187,5.38e-44,6;CL:0000056,5.38e-44,6;CL:0000192,1.70e-39,3;CL:0000359,1.70e-39,3;CL:0002539,1.70e-39,3;CL:0000514,1.70e-39,3;CL:0000222,6.59e-38,7;CL:0000355,8.84e-30,9;CL:0002494,7.15e-11,3;CL:0000737,7.15e-11,3;CL:0000746,7.15e-11,3;CL:0000513,7.15e-11,3;CL:0000393,1.01e-07,39;CL:0000211,1.01e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001135!6.54e-10!3;UBERON:0004237!6.54e-10!3;UBERON:0004695!6.54e-10!3;UBERON:0002111!6.54e-10!3;UBERON:0004178!6.54e-10!3;UBERON:0002048!1.09e-08!14;UBERON:0000117!1.09e-08!14;UBERON:0000171!1.09e-08!14;UBERON:0000170!1.09e-08!14;UBERON:0005597!1.09e-08!14;UBERON:0000118!1.09e-08!14;UBERON:0001134!2.40e-08!9;UBERON:0002036!2.40e-08!9;UBERON:0002385!2.40e-08!9;UBERON:0000486!2.40e-08!9;UBERON:0001015!2.40e-08!9;UBERON:0004290!2.40e-08!9;UBERON:0003082!2.40e-08!9;UBERON:0000947!1.65e-07!4;UBERON:0001637!1.65e-07!4;UBERON:0003509!1.65e-07!4;UBERON:0004573!1.65e-07!4;UBERON:0004571!1.65e-07!4;UBERON:0010191!1.65e-07!4;UBERON:0004572!1.65e-07!4;UBERON:0000383!1.82e-07!10;UBERON:0005153!5.58e-07!17;UBERON:0005178!5.58e-07!17;UBERON:0005181!5.58e-07!17;UBERON:0002224!5.58e-07!17;UBERON:0000915!5.58e-07!17;UBERON:0008947!5.58e-07!17;UBERON:0003258!5.58e-07!17;UBERON:0002329!9.59e-07!11;UBERON:0003077!9.59e-07!11;UBERON:0003059!9.59e-07!11;UBERON:0007282!9.59e-07!11;UBERON:0009618!9.59e-07!11;UBERON:0007285!9.59e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.70e-39,3;UBERON:0004237,1.70e-39,3;UBERON:0004695,1.70e-39,3;UBERON:0002111,1.70e-39,3;UBERON:0004178,1.70e-39,3;UBERON:0000947,5.63e-30,4;UBERON:0001637,5.63e-30,4;UBERON:0004573,5.63e-30,4;UBERON:0003509,5.63e-30,4;UBERON:0004571,5.63e-30,4;UBERON:0010191,5.63e-30,4;UBERON:0004572,5.63e-30,4;UBERON:0001134,8.84e-30,9;UBERON:0002036,8.84e-30,9;UBERON:0002385,8.84e-30,9;UBERON:0000486,8.84e-30,9;UBERON:0007503,8.84e-30,9;UBERON:0001015,8.84e-30,9;UBERON:0002329,8.84e-30,9;UBERON:0003082,8.84e-30,9;UBERON:0003059,8.84e-30,9;UBERON:0007282,8.84e-30,9;UBERON:0004290,8.84e-30,9;UBERON:0009618,8.84e-30,9;UBERON:0000383,6.24e-27,10;UBERON:0007524,1.34e-24,11;UBERON:0003077,1.34e-24,11;UBERON:0007285,1.34e-24,11;UBERON:0000055,2.98e-24,5;UBERON:0007500,2.98e-24,5;UBERON:0001981,2.98e-24,5;UBERON:0002049,2.98e-24,5;UBERON:0007798,2.98e-24,5;UBERON:0004537,2.98e-24,5;UBERON:0006965,2.98e-24,5;UBERON:0004535,2.24e-12,23;UBERON:0001009,2.24e-12,23;UBERON:0002204,3.42e-09,32;UBERON:0004872,6.05e-09,33;UBERON:0005256,8.07e-07,45|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76255545165808,2.33166941804883,0.734187008646726,0,0,0,0.194429899074283,0,0,0,0,0,0,0.85960031981627,1.54701627683233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340860645156116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461230994512117,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0.234690248288502,0,0,0.390267295715598,0.157635144106191,0.221464689648775,0,0.491589944147214,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.375364950902364,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0,0,0,0,0.409231043169689,0.154936841185966,0,0,0.233931608445408,0,0,0,0|short_description=p@chrX:160839338..160839364,+}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=98
|TSSclassifier=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chrX:160839338..160839364,+
|description=CAGE_peak_at_chrX:160839338..160839364,+
|id=chrX:160839338..160839364,+
|ontology_enrichment_celltype=CL:0000680!9.59e-13!6;CL:0000183!9.59e-13!6;CL:0000187!9.59e-13!6;CL:0000056!9.59e-13!6;CL:0000222!7.33e-11!7;CL:0000192!6.54e-10!3;CL:0000359!6.54e-10!3;CL:0002539!6.54e-10!3;CL:0000514!6.54e-10!3;CL:0000355!2.40e-08!9
|ontology_enrichment_celltype_v019_2=CL:0000680,5.38e-44,6;CL:0000187,5.38e-44,6;CL:0000056,5.38e-44,6;CL:0000192,1.70e-39,3;CL:0000359,1.70e-39,3;CL:0002539,1.70e-39,3;CL:0000514,1.70e-39,3;CL:0000222,6.59e-38,7;CL:0000355,8.84e-30,9;CL:0002494,7.15e-11,3;CL:0000737,7.15e-11,3;CL:0000746,7.15e-11,3;CL:0000513,7.15e-11,3;CL:0000393,1.01e-07,39;CL:0000211,1.01e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001135!6.54e-10!3;UBERON:0004237!6.54e-10!3;UBERON:0004695!6.54e-10!3;UBERON:0002111!6.54e-10!3;UBERON:0004178!6.54e-10!3;UBERON:0002048!1.09e-08!14;UBERON:0000117!1.09e-08!14;UBERON:0000171!1.09e-08!14;UBERON:0000170!1.09e-08!14;UBERON:0005597!1.09e-08!14;UBERON:0000118!1.09e-08!14;UBERON:0001134!2.40e-08!9;UBERON:0002036!2.40e-08!9;UBERON:0002385!2.40e-08!9;UBERON:0000486!2.40e-08!9;UBERON:0001015!2.40e-08!9;UBERON:0004290!2.40e-08!9;UBERON:0003082!2.40e-08!9;UBERON:0000947!1.65e-07!4;UBERON:0001637!1.65e-07!4;UBERON:0003509!1.65e-07!4;UBERON:0004573!1.65e-07!4;UBERON:0004571!1.65e-07!4;UBERON:0010191!1.65e-07!4;UBERON:0004572!1.65e-07!4;UBERON:0000383!1.82e-07!10;UBERON:0005153!5.58e-07!17;UBERON:0005178!5.58e-07!17;UBERON:0005181!5.58e-07!17;UBERON:0002224!5.58e-07!17;UBERON:0000915!5.58e-07!17;UBERON:0008947!5.58e-07!17;UBERON:0003258!5.58e-07!17;UBERON:0002329!9.59e-07!11;UBERON:0003077!9.59e-07!11;UBERON:0003059!9.59e-07!11;UBERON:0007282!9.59e-07!11;UBERON:0009618!9.59e-07!11;UBERON:0007285!9.59e-07!11
|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.70e-39,3;UBERON:0004237,1.70e-39,3;UBERON:0004695,1.70e-39,3;UBERON:0002111,1.70e-39,3;UBERON:0004178,1.70e-39,3;UBERON:0000947,5.63e-30,4;UBERON:0001637,5.63e-30,4;UBERON:0004573,5.63e-30,4;UBERON:0003509,5.63e-30,4;UBERON:0004571,5.63e-30,4;UBERON:0010191,5.63e-30,4;UBERON:0004572,5.63e-30,4;UBERON:0001134,8.84e-30,9;UBERON:0002036,8.84e-30,9;UBERON:0002385,8.84e-30,9;UBERON:0000486,8.84e-30,9;UBERON:0007503,8.84e-30,9;UBERON:0001015,8.84e-30,9;UBERON:0002329,8.84e-30,9;UBERON:0003082,8.84e-30,9;UBERON:0003059,8.84e-30,9;UBERON:0007282,8.84e-30,9;UBERON:0004290,8.84e-30,9;UBERON:0009618,8.84e-30,9;UBERON:0000383,6.24e-27,10;UBERON:0007524,1.34e-24,11;UBERON:0003077,1.34e-24,11;UBERON:0007285,1.34e-24,11;UBERON:0000055,2.98e-24,5;UBERON:0007500,2.98e-24,5;UBERON:0001981,2.98e-24,5;UBERON:0002049,2.98e-24,5;UBERON:0007798,2.98e-24,5;UBERON:0004537,2.98e-24,5;UBERON:0006965,2.98e-24,5;UBERON:0004535,2.24e-12,23;UBERON:0001009,2.24e-12,23;UBERON:0002204,3.42e-09,32;UBERON:0004872,6.05e-09,33;UBERON:0005256,8.07e-07,45
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76255545165808,2.33166941804883,0.734187008646726,0,0,0,0.194429899074283,0,0,0,0,0,0,0.85960031981627,1.54701627683233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340860645156116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461230994512117,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0.234690248288502,0,0,0.390267295715598,0.157635144106191,0.221464689648775,0,0.491589944147214,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.375364950902364,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0,0,0,0,0.409231043169689,0.154936841185966,0,0,0.233931608445408,0,0,0,0
|short_description=p@chrX:160839338..160839364,+
}}

Latest revision as of 04:15, 6 August 2015

Short description:p@chrX:160839338..160839364, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chrX:160839338..160839364, +
Coexpression cluster:MCL_coexpression_mm9:98
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0.0
0.5
1.0
1.5
2.0
2.5




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data