FFCP PHASE1:Mm9::chr6:85163894..85163900,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=519|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:85163894..85163900,-|id=chr6:85163894..85163900,-|ontology_enrichment_celltype=CL:0000221!6.02e-11!44;CL:0000133!6.02e-11!44;CL:0002319!1.31e-10!43;CL:0000117!7.61e-10!23;CL:0000337!7.61e-10!23;CL:0000055!1.05e-08!50;CL:0000540!6.36e-07!33;CL:0000047!6.36e-07!33;CL:0000031!6.36e-07!33;CL:0000404!6.36e-07!33|ontology_enrichment_celltype_v019_2=CL:0000221,1.04e-11,44;CL:0000133,1.04e-11,44;CL:0002319,2.54e-11,43;CL:0000117,2.87e-11,23;CL:0000337,2.87e-11,23;CL:0000540,1.73e-07,33;CL:0000047,1.73e-07,33;CL:0000031,1.73e-07,33;CL:0000404,1.73e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!5.41e-23!75;UBERON:0001016!5.41e-23!75;UBERON:0001017!6.13e-23!73;UBERON:0005743!6.13e-23!73;UBERON:0001049!3.17e-20!52;UBERON:0005068!3.17e-20!52;UBERON:0006241!3.17e-20!52;UBERON:0007135!3.17e-20!52;UBERON:0000955!5.32e-19!50;UBERON:0006238!5.32e-19!50;UBERON:0002616!1.69e-18!49;UBERON:0004121!3.89e-16!102;UBERON:0000924!3.89e-16!102;UBERON:0006601!3.89e-16!102;UBERON:0002020!7.72e-16!34;UBERON:0002346!2.60e-15!71;UBERON:0003075!2.60e-15!71;UBERON:0007284!2.60e-15!71;UBERON:0000033!6.05e-15!63;UBERON:0003080!1.84e-13!40;UBERON:0002780!6.06e-13!39;UBERON:0001890!6.06e-13!39;UBERON:0006240!6.06e-13!39;UBERON:0002791!7.11e-13!29;UBERON:0003528!7.11e-13!29;UBERON:0001893!7.11e-13!29;UBERON:0003056!1.07e-10!49;UBERON:0000025!2.31e-10!114;UBERON:0004111!5.06e-10!122;UBERON:0000956!8.59e-10!21;UBERON:0001869!8.59e-10!21;UBERON:0000203!8.59e-10!21;UBERON:0002619!1.59e-08!17;UBERON:0003076!8.99e-08!12;UBERON:0003057!8.99e-08!12;UBERON:0000475!1.43e-07!200|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.44e-26,73;UBERON:0001016,2.68e-25,75;UBERON:0000073,1.12e-24,54;UBERON:0001049,4.77e-23,52;UBERON:0005068,4.77e-23,52;UBERON:0006241,4.77e-23,52;UBERON:0007135,4.77e-23,52;UBERON:0000955,1.93e-19,47;UBERON:0006238,1.93e-19,47;UBERON:0002616,7.22e-19,46;UBERON:0002020,2.71e-18,34;UBERON:0002346,6.90e-18,64;UBERON:0003075,6.90e-18,64;UBERON:0007284,6.90e-18,64;UBERON:0004121,1.22e-17,95;UBERON:0000924,1.22e-17,95;UBERON:0006601,1.22e-17,95;UBERON:0010371,1.01e-15,73;UBERON:0003080,3.72e-15,40;UBERON:0003528,8.10e-15,29;UBERON:0002791,8.10e-15,29;UBERON:0001893,8.10e-15,29;UBERON:0002780,1.49e-14,39;UBERON:0001890,1.49e-14,39;UBERON:0006240,1.49e-14,39;UBERON:0000956,3.31e-11,21;UBERON:0001869,3.31e-11,21;UBERON:0000203,3.31e-11,21;UBERON:0003056,4.07e-11,49;UBERON:0000025,8.36e-10,114;UBERON:0002619,1.01e-09,17;UBERON:0004111,2.29e-09,122;UBERON:0003076,7.65e-09,12;UBERON:0003057,7.65e-09,12;UBERON:0010314,8.89e-09,92;UBERON:0002021,2.10e-07,10;UBERON:0000411,2.10e-07,10;UBERON:0001950,2.10e-07,10|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0.0874204024189974,0.999329285446988,0.202475267389826,0,0.473193248037357,0.822686601634433,0.42438965179803,4.33720779770456,0.297872853602656,0.522399578277871,0.319984845586813,0,0,0,0,0.190023419456374,0,0.221730510655305,0.635030673459631,1.23012957516914,0,0.866554859253824,0.498703936075477,0,7.53356935326434,2.3440060335714,3.14114246384279,18.8234076169925,21.8574555186703,2.42755176515577,0.377690453926732,0.811015449756117,1.83546752161682,1.56478268869608,18.0960879795771,10.1055644057857,13.2212331370513,9.23910382727393,14.3752564364972,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,1.82084814773638,6.34789175126439,3.1691570175309,2.03306719241479,2.66788438833342,5.84934816232909,11.8663963508037,4.2628806896766,40.745615030503,59.553837324841,2.59224030771194,3.51015439662396,2.73422449756797,17.7103610330358,17.2277461942259,1.83736198822431,1.15014565221884,3.67687514644008,23.1243350098716,13.1517958227743,12.595735727012,1.71452174049252,2.47016637726506,1.56274011167028,17.8677119360884,36.5795696520592,18.0301932376636,17.6777151284201,17.7964600998879,5.40558392893372,0.908714319998209,2.26714680320357,0,6.0229671388697,2.719885334831,5.93673510801599,4.54843492213368,2.68816132258401,2.38755514223978,0.681721290312231,1.29893002301434,0.35333957451034,3.38024207464033,0,2.54805239706646,0,0.649473123033642,2.02687892380079,1.01104889002957,3.53970027129086,0,0.593768556259299,0.693941307064543,0.913396434936424,1.15307748628029,0.150722640552623,1.41106448562846,2.01066546127481,0.494389935468748,1.73519228303894,0,0.647067399789637,0.441683036920787,0.969750506270444,7.45567044872489,15.8101630386235,28.2753054198164,0,0.11981512450592,0,0,10.9347166765521,14.640019290196,3.01570445070875,9.38651329038293,12.0186264945255,17.6619837875626,15.412919991437,0.81471491080253,1.11966273549084,0.505445516867349,1.89397670297827,0.390361328888111,0.229902104433473,0.540186389416048,0.90422890701429,0.816437989815934,0.640568601424249,0.655912071918102,3.62184719034622,0.431135985865684,0.756424320671277,1.05570674498369,0.43839146485515,0.556094498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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=519 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:85163894..85163900,- | |||
|description=CAGE_peak_at_chr6:85163894..85163900,- | |||
|id=chr6:85163894..85163900,- | |||
|ontology_enrichment_celltype=CL:0000221!6.02e-11!44;CL:0000133!6.02e-11!44;CL:0002319!1.31e-10!43;CL:0000117!7.61e-10!23;CL:0000337!7.61e-10!23;CL:0000055!1.05e-08!50;CL:0000540!6.36e-07!33;CL:0000047!6.36e-07!33;CL:0000031!6.36e-07!33;CL:0000404!6.36e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.04e-11,44;CL:0000133,1.04e-11,44;CL:0002319,2.54e-11,43;CL:0000117,2.87e-11,23;CL:0000337,2.87e-11,23;CL:0000540,1.73e-07,33;CL:0000047,1.73e-07,33;CL:0000031,1.73e-07,33;CL:0000404,1.73e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.41e-23!75;UBERON:0001016!5.41e-23!75;UBERON:0001017!6.13e-23!73;UBERON:0005743!6.13e-23!73;UBERON:0001049!3.17e-20!52;UBERON:0005068!3.17e-20!52;UBERON:0006241!3.17e-20!52;UBERON:0007135!3.17e-20!52;UBERON:0000955!5.32e-19!50;UBERON:0006238!5.32e-19!50;UBERON:0002616!1.69e-18!49;UBERON:0004121!3.89e-16!102;UBERON:0000924!3.89e-16!102;UBERON:0006601!3.89e-16!102;UBERON:0002020!7.72e-16!34;UBERON:0002346!2.60e-15!71;UBERON:0003075!2.60e-15!71;UBERON:0007284!2.60e-15!71;UBERON:0000033!6.05e-15!63;UBERON:0003080!1.84e-13!40;UBERON:0002780!6.06e-13!39;UBERON:0001890!6.06e-13!39;UBERON:0006240!6.06e-13!39;UBERON:0002791!7.11e-13!29;UBERON:0003528!7.11e-13!29;UBERON:0001893!7.11e-13!29;UBERON:0003056!1.07e-10!49;UBERON:0000025!2.31e-10!114;UBERON:0004111!5.06e-10!122;UBERON:0000956!8.59e-10!21;UBERON:0001869!8.59e-10!21;UBERON:0000203!8.59e-10!21;UBERON:0002619!1.59e-08!17;UBERON:0003076!8.99e-08!12;UBERON:0003057!8.99e-08!12;UBERON:0000475!1.43e-07!200 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.44e-26,73;UBERON:0001016,2.68e-25,75;UBERON:0000073,1.12e-24,54;UBERON:0001049,4.77e-23,52;UBERON:0005068,4.77e-23,52;UBERON:0006241,4.77e-23,52;UBERON:0007135,4.77e-23,52;UBERON:0000955,1.93e-19,47;UBERON:0006238,1.93e-19,47;UBERON:0002616,7.22e-19,46;UBERON:0002020,2.71e-18,34;UBERON:0002346,6.90e-18,64;UBERON:0003075,6.90e-18,64;UBERON:0007284,6.90e-18,64;UBERON:0004121,1.22e-17,95;UBERON:0000924,1.22e-17,95;UBERON:0006601,1.22e-17,95;UBERON:0010371,1.01e-15,73;UBERON:0003080,3.72e-15,40;UBERON:0003528,8.10e-15,29;UBERON:0002791,8.10e-15,29;UBERON:0001893,8.10e-15,29;UBERON:0002780,1.49e-14,39;UBERON:0001890,1.49e-14,39;UBERON:0006240,1.49e-14,39;UBERON:0000956,3.31e-11,21;UBERON:0001869,3.31e-11,21;UBERON:0000203,3.31e-11,21;UBERON:0003056,4.07e-11,49;UBERON:0000025,8.36e-10,114;UBERON:0002619,1.01e-09,17;UBERON:0004111,2.29e-09,122;UBERON:0003076,7.65e-09,12;UBERON:0003057,7.65e-09,12;UBERON:0010314,8.89e-09,92;UBERON:0002021,2.10e-07,10;UBERON:0000411,2.10e-07,10;UBERON:0001950,2.10e-07,10 | |||
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| |||
|short_description=p@chr6:85163894..85163900,- | |||
}} |
Latest revision as of 05:14, 6 August 2015
Short description: | p@chr6:85163894..85163900, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:85163894..85163900, - |
Coexpression cluster: | MCL_coexpression_mm9:519 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.04e-11 | 44 |
neurectodermal cell | 1.04e-11 | 44 |
neural cell | 2.54e-11 | 43 |
CNS neuron (sensu Vertebrata) | 2.87e-11 | 23 |
neuroblast (sensu Vertebrata) | 2.87e-11 | 23 |
neuron | 1.73e-07 | 33 |
neuronal stem cell | 1.73e-07 | 33 |
neuroblast | 1.73e-07 | 33 |
electrically signaling cell | 1.73e-07 | 33 |