FFCP PHASE1:Mm9::chr6:87788665..87788786,-: Difference between revisions
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{{FFCP|EntrezGene=57905|HGNC=|MCL_coexpression_id=101|UniProt=Q69ZQ2|association_with_transcript=0bp_to_ENSMUST00000089497,NM_133934,uc009cub.1_5end|description=CAGE_peak_1_at_Isy1_5end|id=chr6:87788665..87788786,-|ontology_enrichment_celltype=CL:0000988!6.86e-12!32;CL:0002032!6.86e-12!32;CL:0000037!6.86e-12!32;CL:0000566!6.86e-12!32;CL:0000837!6.86e-12!32;CL:0000542!1.42e-08!13;CL:0000051!1.42e-08!13;CL:0000838!4.03e-08!12;CL:0002031!4.92e-08!25;CL:0000034!5.87e-08!97;CL:0000084!1.81e-07!11;CL:0000827!1.81e-07!11;CL:0000791!3.32e-07!9;CL:0000789!3.32e-07!9;CL:0002420!3.32e-07!9;CL:0002419!3.32e-07!9;CL:0000790!3.32e-07!9|ontology_enrichment_celltype_v019_2=CL:0000988,6.86e-12,32;CL:0002032,6.86e-12,32;CL:0000037,6.86e-12,32;CL:0000837,6.86e-12,32;CL:0000542,1.42e-08,13;CL:0000051,1.42e-08,13;CL:0000838,4.03e-08,12;CL:0002031,4.92e-08,25;CL:0000034,5.87e-08,97;CL:0000084,1.81e-07,11;CL:0000827,1.81e-07,11;CL:0000791,3.32e-07,9;CL:0000789,3.32e-07,9;CL:0002420,3.32e-07,9;CL:0002419,3.32e-07,9;CL:0000790,3.32e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!5.90e-14!29;UBERON:0002193!4.45e-12!48;UBERON:0002390!9.44e-12!45;UBERON:0003061!9.44e-12!45;UBERON:0002370!1.89e-11!23;UBERON:0000974!1.89e-11!23;UBERON:0004807!1.89e-11!23;UBERON:0005058!1.89e-11!23;UBERON:0003351!1.89e-11!23;UBERON:0009113!1.89e-11!23;UBERON:0003295!1.89e-11!23;UBERON:0009722!1.89e-11!23;UBERON:0005562!1.89e-11!23;UBERON:0007690!1.89e-11!23;UBERON:0006562!7.25e-11!24;UBERON:0001557!7.25e-11!24;UBERON:0001042!7.25e-11!24;UBERON:0008814!7.25e-11!24;UBERON:0009145!7.25e-11!24;UBERON:0002405!2.03e-10!70;UBERON:0005057!2.19e-10!51;UBERON:0003408!4.06e-10!24;UBERON:0000072!1.26e-09!27;UBERON:0000949!2.46e-07!72;UBERON:0002368!5.80e-07!60|ontology_enrichment_uberon_v019_2=UBERON:0004177,5.90e-14,29;UBERON:0005057,5.90e-14,29;UBERON:0002193,4.45e-12,48;UBERON:0002405,4.45e-12,48;UBERON:0002390,9.44e-12,45;UBERON:0003061,9.44e-12,45;UBERON:0002370,1.89e-11,23;UBERON:0000974,1.89e-11,23;UBERON:0004807,1.89e-11,23;UBERON:0005058,1.89e-11,23;UBERON:0003351,1.89e-11,23;UBERON:0009113,1.89e-11,23;UBERON:0003295,1.89e-11,23;UBERON:0009722,1.89e-11,23;UBERON:0005562,1.89e-11,23;UBERON:0007690,1.89e-11,23;UBERON:0006562,7.25e-11,24;UBERON:0001557,7.25e-11,24;UBERON:0001042,7.25e-11,24;UBERON:0008814,7.25e-11,24;UBERON:0009145,7.25e-11,24;UBERON:0003408,4.06e-10,24;UBERON:0000072,1.26e-09,27;UBERON:0000077,1.03e-08,35;UBERON:0000153,1.53e-07,43;UBERON:0007811,2.24e-07,36;UBERON:0000949,2.46e-07,72;UBERON:0002368,5.80e-07,60|phase1_expression=23.2215828301951,15.7038933437712,20.4749657725291,10.2837831844322,7.51343594919521,21.9921846204576,23.3612640595526,39.1243670027976,142.337398095335,145.822199898602,161.629762004877,115.669630543238,38.5201642345213,41.1750095393478,44.3035983214831,38.6727760714568,37.0767795407918,37.224535512272,37.8435836751839,34.7999514474385,21.1757792476164,28.9929577506585,27.1647780704493,23.8388709962176,21.3350631392468,24.6919744569459,16.7997178502039,21.7625945012748,13.8717096203153,21.4225610295941,26.3859307679813,34.2916563668201,35.6737576799051,31.6963362030877,34.3733427504017,32.748225135623,31.4420808644048,28.8786825208466,25.0027310247616,28.2702821745851,16.4704816648684,23.9065919735456,15.5363312969969,20.3952845120435,16.9299475136589,22.2091570115635,12.5182615095686,11.9913836009246,15.5977189741475,13.6100929351998,14.4186014274123,15.8127820801469,66.1063467867481,76.8883870532025,77.6376676019092,25.4686841675588,18.3381401560804,12.3761302146586,17.601532094785,25.3915670050576,20.9164363157039,17.2810711355257,14.2287167377782,15.7482450524245,13.8441290759376,12.7886420690298,10.7856039786626,11.5265491596466,27.788816098672,31.9964073846107,30.4971193959504,19.4242669394586,22.307722636113,25.9680494335703,23.1946039864132,29.4150011715207,27.5289702498472,20.1745994174597,24.7306518542552,17.9365351313064,19.0294298693012,30.7338888628488,16.7509799400829,22.5105044012672,22.7669389187447,21.8025153250514,22.2099822046601,22.5543329448614,30.1390249466073,16.8524579038132,14.7830889237856,16.3480536626463,21.0791113449403,22.6675340487883,25.3412802804591,21.5052905806721,19.3813299781818,24.0306754835061,31.69389256155,27.2071472372962,16.6195235336483,21.815501160434,61.153257529595,42.6640021891999,21.216122019099,21.0288688344332,20.7265022456061,23.0651437032501,40.9121856162531,28.5008907004464,25.8493136881542,20.0947215686013,18.4492397804847,24.4170677695249,19.8724915059341,21.2376539347152,12.1125534189843,18.9425157565084,22.9998743506967,25.8826959915855,23.8508839937225,30.0622656943838,16.775258509631,16.9812862266697,18.431310199584,17.6265368093928,50.5619825414984,37.7938720525847,46.7618435628878,19.3229924832221,19.6725259212009,20.356005042284,15.6441888173049,21.9915293304084,16.4152555202052,22.3892943033506,25.0524835071778,23.7617313865278,20.4705434331277,14.5204880561667,27.0650521362424,22.300504130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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:57905 | |||
|HGNC= | |||
|MCL_coexpression_id=101 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q69ZQ2 | |||
|association_with_transcript=0bp_to_ENSMUST00000089497,NM_133934,uc009cub.1_5end | |||
|cluster_id=chr6:87788665..87788786,- | |||
|description=CAGE_peak_1_at_Isy1_5end | |||
|id=chr6:87788665..87788786,- | |||
|ontology_enrichment_celltype=CL:0000988!6.86e-12!32;CL:0002032!6.86e-12!32;CL:0000037!6.86e-12!32;CL:0000566!6.86e-12!32;CL:0000837!6.86e-12!32;CL:0000542!1.42e-08!13;CL:0000051!1.42e-08!13;CL:0000838!4.03e-08!12;CL:0002031!4.92e-08!25;CL:0000034!5.87e-08!97;CL:0000084!1.81e-07!11;CL:0000827!1.81e-07!11;CL:0000791!3.32e-07!9;CL:0000789!3.32e-07!9;CL:0002420!3.32e-07!9;CL:0002419!3.32e-07!9;CL:0000790!3.32e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,6.86e-12,32;CL:0002032,6.86e-12,32;CL:0000037,6.86e-12,32;CL:0000837,6.86e-12,32;CL:0000542,1.42e-08,13;CL:0000051,1.42e-08,13;CL:0000838,4.03e-08,12;CL:0002031,4.92e-08,25;CL:0000034,5.87e-08,97;CL:0000084,1.81e-07,11;CL:0000827,1.81e-07,11;CL:0000791,3.32e-07,9;CL:0000789,3.32e-07,9;CL:0002420,3.32e-07,9;CL:0002419,3.32e-07,9;CL:0000790,3.32e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!5.90e-14!29;UBERON:0002193!4.45e-12!48;UBERON:0002390!9.44e-12!45;UBERON:0003061!9.44e-12!45;UBERON:0002370!1.89e-11!23;UBERON:0000974!1.89e-11!23;UBERON:0004807!1.89e-11!23;UBERON:0005058!1.89e-11!23;UBERON:0003351!1.89e-11!23;UBERON:0009113!1.89e-11!23;UBERON:0003295!1.89e-11!23;UBERON:0009722!1.89e-11!23;UBERON:0005562!1.89e-11!23;UBERON:0007690!1.89e-11!23;UBERON:0006562!7.25e-11!24;UBERON:0001557!7.25e-11!24;UBERON:0001042!7.25e-11!24;UBERON:0008814!7.25e-11!24;UBERON:0009145!7.25e-11!24;UBERON:0002405!2.03e-10!70;UBERON:0005057!2.19e-10!51;UBERON:0003408!4.06e-10!24;UBERON:0000072!1.26e-09!27;UBERON:0000949!2.46e-07!72;UBERON:0002368!5.80e-07!60 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,5.90e-14,29;UBERON:0005057,5.90e-14,29;UBERON:0002193,4.45e-12,48;UBERON:0002405,4.45e-12,48;UBERON:0002390,9.44e-12,45;UBERON:0003061,9.44e-12,45;UBERON:0002370,1.89e-11,23;UBERON:0000974,1.89e-11,23;UBERON:0004807,1.89e-11,23;UBERON:0005058,1.89e-11,23;UBERON:0003351,1.89e-11,23;UBERON:0009113,1.89e-11,23;UBERON:0003295,1.89e-11,23;UBERON:0009722,1.89e-11,23;UBERON:0005562,1.89e-11,23;UBERON:0007690,1.89e-11,23;UBERON:0006562,7.25e-11,24;UBERON:0001557,7.25e-11,24;UBERON:0001042,7.25e-11,24;UBERON:0008814,7.25e-11,24;UBERON:0009145,7.25e-11,24;UBERON:0003408,4.06e-10,24;UBERON:0000072,1.26e-09,27;UBERON:0000077,1.03e-08,35;UBERON:0000153,1.53e-07,43;UBERON:0007811,2.24e-07,36;UBERON:0000949,2.46e-07,72;UBERON:0002368,5.80e-07,60 | |||
|phase1_expression=23.2215828301951,15.7038933437712,20.4749657725291,10.2837831844322,7.51343594919521,21.9921846204576,23.3612640595526,39.1243670027976,142.337398095335,145.822199898602,161.629762004877,115.669630543238,38.5201642345213,41.1750095393478,44.3035983214831,38.6727760714568,37.0767795407918,37.224535512272,37.8435836751839,34.7999514474385,21.1757792476164,28.9929577506585,27.1647780704493,23.8388709962176,21.3350631392468,24.6919744569459,16.7997178502039,21.7625945012748,13.8717096203153,21.4225610295941,26.3859307679813,34.2916563668201,35.6737576799051,31.6963362030877,34.3733427504017,32.748225135623,31.4420808644048,28.8786825208466,25.0027310247616,28.2702821745851,16.4704816648684,23.9065919735456,15.5363312969969,20.3952845120435,16.9299475136589,22.2091570115635,12.5182615095686,11.9913836009246,15.5977189741475,13.6100929351998,14.4186014274123,15.8127820801469,66.1063467867481,76.8883870532025,77.6376676019092,25.4686841675588,18.3381401560804,12.3761302146586,17.601532094785,25.3915670050576,20.9164363157039,17.2810711355257,14.2287167377782,15.7482450524245,13.8441290759376,12.7886420690298,10.7856039786626,11.5265491596466,27.788816098672,31.9964073846107,30.4971193959504,19.4242669394586,22.307722636113,25.9680494335703,23.1946039864132,29.4150011715207,27.5289702498472,20.1745994174597,24.7306518542552,17.9365351313064,19.0294298693012,30.7338888628488,16.7509799400829,22.5105044012672,22.7669389187447,21.8025153250514,22.2099822046601,22.5543329448614,30.1390249466073,16.8524579038132,14.7830889237856,16.3480536626463,21.0791113449403,22.6675340487883,25.3412802804591,21.5052905806721,19.3813299781818,24.0306754835061,31.69389256155,27.2071472372962,16.6195235336483,21.815501160434,61.153257529595,42.6640021891999,21.216122019099,21.0288688344332,20.7265022456061,23.0651437032501,40.9121856162531,28.5008907004464,25.8493136881542,20.0947215686013,18.4492397804847,24.4170677695249,19.8724915059341,21.2376539347152,12.1125534189843,18.9425157565084,22.9998743506967,25.8826959915855,23.8508839937225,30.0622656943838,16.775258509631,16.9812862266697,18.431310199584,17.6265368093928,50.5619825414984,37.7938720525847,46.7618435628878,19.3229924832221,19.6725259212009,20.356005042284,15.6441888173049,21.9915293304084,16.4152555202052,22.3892943033506,25.0524835071778,23.7617313865278,20.4705434331277,14.5204880561667,27.0650521362424,22.3005041300469,20.7071449276152,24.1127708537144,26.3981616707152,25.7508577772548,25.0183604574476,15.78090561508,35.7842868268518,28.3659120251729,27.2724242454121,23.6731391021781,22.2437799380478,19.8503734917635,20.1666493679785,32.6416197582329,44.941643988047,46.065275373534,46.034486902086,14.4988040774851,15.7132460187334,16.2055855314913,16.3353867553795,15.1508458445501,14.3468414985262,16.7424440220294,17.7060444923749,17.2812706703411,15.6331857417806,16.0884114797513,16.3758995282629,14.7661987299586,18.0031094538662,15.4337381574428,18.2952255250791,20.6838270882362,13.5471701023357,21.1560453330835,36.6855790920602,30.190767341857,23.8404803445873,21.3784536100743,17.3454874198999,16.5496294717926,23.7264530772256,16.9639923365731,17.8447998248191,16.9113001234978,23.9805827156518,20.6728463990471,21.6138049874694,20.1132685986911,31.6745394591646,29.2476192280906,22.5415471346161,24.0308566857471,23.0803459729475,21.3914250665472,19.666563045644,20.2225902732055,19.6248409801719,14.4374681788507,19.862326014839,37.5401487861212,41.8670659591122,39.1260075549646,30.2261580868869,27.4941962117755,16.5506803657923,23.8787794084173,23.1853374288301,20.8666674022942,17.2521847832825,20.0956111740992,24.0269008298212,19.1959947239805,24.9362404795458,24.6046195895317,19.3990849674935,24.8233749419335,23.4669566076517,30.5541154395339,23.9384053254272,20.7707759227852,14.9967493758189,17.1717610114863,19.7043930132739,20.3747514476873,21.8453033060757,16.3863314715738,18.131923095919,17.3578870297814,18.0949540727127,19.0366989336548,21.6376280128376,20.1433824802455,17.8211154886449,24.4972424977705,38.0329073273887,18.4303776859192,22.085575359138,19.9123759591286,19.1726823982191,24.6137861891129,21.6114713859922,23.2122755246843,20.2405350837447,19.5811424800579,15.0209355619679,18.315315036043,17.1747503102005,30.6272838307679,25.2474786998043,15.8371318053634,27.8764790513922,32.0470439724576,28.7207379116513,23.9528451289991,20.0805287158925,14.4494519533646,20.1574068671212,24.3567598749929,23.1723295950069,22.1225730555071,26.3546521437497,25.7838858120467,24.1712120085189,30.0702027032288,27.941475697075,21.6480405381908,18.0887038315119,22.831208653065,19.9104314928566,16.745572201303,20.4164386015428,12.0744280392378,14.3343458735725,21.4352128823924,20.9903754704677,26.5979998933167,23.635724112621,25.6059803602296,22.1525435838687,20.5822085231666,30.7567585436135,30.9580301944834,36.4833218918332,36.9202175729194,38.6844664450501,30.4274970364675,68.8412641475114,51.5021344551061,58.7349888668801,12.4107180341965,27.04672745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| |||
|short_description=p1@Isy1 | |||
}} |
Revision as of 06:35, 6 August 2015
Short description: | p1@Isy1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Isy1_5end |
Coexpression cluster: | MCL_coexpression_mm9:101 |
Association with transcript: | 0bp_to_ENSMUST00000089497, NM_133934, uc009cub.1_5end |
EntrezGene: | 57905 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 6.86e-12 | 32 |
hematopoietic oligopotent progenitor cell | 6.86e-12 | 32 |
hematopoietic stem cell | 6.86e-12 | 32 |
hematopoietic multipotent progenitor cell | 6.86e-12 | 32 |
lymphocyte | 1.42e-08 | 13 |
common lymphoid progenitor | 1.42e-08 | 13 |
lymphoid lineage restricted progenitor cell | 4.03e-08 | 12 |
hematopoietic lineage restricted progenitor cell | 4.92e-08 | 25 |
stem cell | 5.87e-08 | 97 |
T cell | 1.81e-07 | 11 |
pro-T cell | 1.81e-07 | 11 |
mature alpha-beta T cell | 3.32e-07 | 9 |
alpha-beta T cell | 3.32e-07 | 9 |
immature T cell | 3.32e-07 | 9 |
mature T cell | 3.32e-07 | 9 |
immature alpha-beta T cell | 3.32e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 5.90e-14 | 29 |
immune organ | 5.90e-14 | 29 |
hemolymphoid system | 4.45e-12 | 48 |
immune system | 4.45e-12 | 48 |
hematopoietic system | 9.44e-12 | 45 |
blood island | 9.44e-12 | 45 |
thymus | 1.89e-11 | 23 |
neck | 1.89e-11 | 23 |
respiratory system epithelium | 1.89e-11 | 23 |
hemolymphoid system gland | 1.89e-11 | 23 |
pharyngeal epithelium | 1.89e-11 | 23 |
thymic region | 1.89e-11 | 23 |
pharyngeal gland | 1.89e-11 | 23 |
entire pharyngeal arch endoderm | 1.89e-11 | 23 |
thymus primordium | 1.89e-11 | 23 |
early pharyngeal endoderm | 1.89e-11 | 23 |
pharynx | 7.25e-11 | 24 |
upper respiratory tract | 7.25e-11 | 24 |
chordate pharynx | 7.25e-11 | 24 |
pharyngeal arch system | 7.25e-11 | 24 |
pharyngeal region of foregut | 7.25e-11 | 24 |
gland of gut | 4.06e-10 | 24 |
segment of respiratory tract | 1.26e-09 | 27 |
mixed endoderm/mesoderm-derived structure | 1.03e-08 | 35 |
anterior region of body | 1.53e-07 | 43 |
craniocervical region | 2.24e-07 | 36 |
endocrine system | 2.46e-07 | 72 |
endocrine gland | 5.80e-07 | 60 |