FFCP PHASE1:Mm9::chrX:50113602..50113611,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1287|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:50113602..50113611,+|id=chrX:50113602..50113611,+|ontology_enrichment_celltype=CL:0000084!1.32e-18!11;CL:0000827!1.32e-18!11;CL:0000838!7.55e-17!12;CL:0000542!2.31e-15!13;CL:0000051!2.31e-15!13;CL:0000791!1.26e-14!9;CL:0000789!1.26e-14!9;CL:0002420!1.26e-14!9;CL:0002419!1.26e-14!9;CL:0000790!1.26e-14!9;CL:0002031!1.29e-13!25;CL:0000624!1.19e-12!8;CL:0000738!3.53e-11!17;CL:0002087!3.53e-11!17;CL:0000988!7.45e-10!32;CL:0002032!7.45e-10!32;CL:0000037!7.45e-10!32;CL:0000566!7.45e-10!32;CL:0000837!7.45e-10!32;CL:0000893!7.91e-09!6;CL:0002489!7.91e-09!6;CL:0000898!7.91e-09!6;CL:0000809!7.91e-09!6;CL:0000810!7.91e-09!6;CL:0000895!7.91e-09!6;CL:0000808!7.91e-09!6;CL:0000894!7.91e-09!6;CL:0000806!7.91e-09!6;CL:0000807!7.91e-09!6;CL:0000805!7.91e-09!6;CL:0002425!7.91e-09!6;CL:0002436!7.91e-09!6;CL:0002427!7.91e-09!6;CL:0002428!7.91e-09!6;CL:0002429!7.91e-09!6;CL:0002433!7.91e-09!6;CL:0002431!7.91e-09!6;CL:0002432!7.91e-09!6|ontology_enrichment_celltype_v019_2=CL:0000084,1.18e-30,11;CL:0000827,1.18e-30,11;CL:0000838,4.51e-28,12;CL:0000542,6.92e-26,13;CL:0000051,6.92e-26,13;CL:0000738,1.05e-19,17;CL:0002087,1.05e-19,17;CL:0000791,1.71e-19,9;CL:0000789,1.71e-19,9;CL:0002420,1.71e-19,9;CL:0002419,1.71e-19,9;CL:0000790,1.71e-19,9;CL:0000624,2.42e-14,8;CL:0002031,2.96e-13,25;CL:0000988,3.05e-10,32;CL:0002032,3.05e-10,32;CL:0000037,3.05e-10,32;CL:0000837,3.05e-10,32;CL:0000625,2.54e-08,1;CL:0000815,2.98e-08,1;CL:0000792,2.98e-08,1;CL:0002320,5.95e-07,46;CL:0000134,5.95e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003408!1.11e-29!24;UBERON:0004177!1.62e-28!29;UBERON:0002370!5.69e-28!23;UBERON:0000974!5.69e-28!23;UBERON:0004807!5.69e-28!23;UBERON:0005058!5.69e-28!23;UBERON:0003351!5.69e-28!23;UBERON:0009113!5.69e-28!23;UBERON:0003295!5.69e-28!23;UBERON:0009722!5.69e-28!23;UBERON:0005562!5.69e-28!23;UBERON:0007690!5.69e-28!23;UBERON:0006562!1.37e-26!24;UBERON:0001557!1.37e-26!24;UBERON:0001042!1.37e-26!24;UBERON:0008814!1.37e-26!24;UBERON:0009145!1.37e-26!24;UBERON:0002193!3.97e-26!48;UBERON:0002390!6.68e-24!45;UBERON:0003061!6.68e-24!45;UBERON:0000072!4.68e-23!27;UBERON:0000063!1.72e-18!35;UBERON:0002405!5.21e-17!70;UBERON:0001004!2.82e-16!42;UBERON:0005057!3.65e-15!51;UBERON:0000065!5.03e-15!41;UBERON:0003081!6.88e-12!88;UBERON:0003929!4.87e-11!55;UBERON:0002368!1.13e-09!60;UBERON:0002530!1.34e-09!65;UBERON:0000064!8.96e-09!99;UBERON:0005911!1.13e-08!69;UBERON:0000490!2.49e-08!66;UBERON:0001041!3.76e-08!92;UBERON:0001007!6.21e-08!128;UBERON:0001555!6.21e-08!128;UBERON:0007026!6.21e-08!128;UBERON:0004119!1.07e-07!130;UBERON:0000925!1.07e-07!130;UBERON:0006595!1.07e-07!130;UBERON:0004921!1.89e-07!126;UBERON:0004185!1.89e-07!126;UBERON:0000077!2.06e-07!97;UBERON:0000949!3.28e-07!72|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.02e-14,23;UBERON:0000974,7.02e-14,23;UBERON:0004807,7.02e-14,23;UBERON:0005058,7.02e-14,23;UBERON:0003351,7.02e-14,23;UBERON:0009113,7.02e-14,23;UBERON:0003295,7.02e-14,23;UBERON:0009722,7.02e-14,23;UBERON:0005562,7.02e-14,23;UBERON:0007690,7.02e-14,23;UBERON:0006562,2.77e-13,24;UBERON:0003408,2.77e-13,24;UBERON:0001557,2.77e-13,24;UBERON:0001042,2.77e-13,24;UBERON:0008814,2.77e-13,24;UBERON:0009145,2.77e-13,24;UBERON:0000072,9.36e-12,27;UBERON:0004177,6.54e-11,29;UBERON:0005057,6.54e-11,29;UBERON:0000077,5.94e-09,35;UBERON:0007811,1.09e-08,36;UBERON:0002193,2.79e-08,48;UBERON:0002405,2.79e-08,48;UBERON:0000029,6.57e-08,1;UBERON:0001097,6.57e-08,1;UBERON:0003968,6.57e-08,1;UBERON:0001467,6.57e-08,1;UBERON:0000065,1.46e-07,41;UBERON:0001004,2.27e-07,42;UBERON:0000153,3.47e-07,43;UBERON:0002384,5.95e-07,46;UBERON:0002390,7.68e-07,45;UBERON:0003061,7.68e-07,45|phase1_expression=0,0,0,0,0,0,0,4.39019299701359,0.985521055061667,0.70219357896598,0.34243593645101,0,7.53283211697305,6.20684857174882,0.333109761815663,0,0,0.473193248037357,0.548457734422955,0.84877930359606,0,3.97163804803541,5.22399578277871,0.319984845586813,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.62681071005672,4.7053131879945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,2.33044095282455,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0.136694227721025,0.686334519619568,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,1.41907650703115,3.08132871494482,2.46849563657811,0.716106782669926,1.78813219303138,0.120195449519969,0.443068581523732,0.706765149637033,0.457240839929999,0.604957110821043,0.584747284438515,1.25075394132428,0.467507608726276,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chrX:50113602..50113611,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1287 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chrX:50113602..50113611,+ | |||
|description=CAGE_peak_at_chrX:50113602..50113611,+ | |||
|id=chrX:50113602..50113611,+ | |||
|ontology_enrichment_celltype=CL:0000084!1.32e-18!11;CL:0000827!1.32e-18!11;CL:0000838!7.55e-17!12;CL:0000542!2.31e-15!13;CL:0000051!2.31e-15!13;CL:0000791!1.26e-14!9;CL:0000789!1.26e-14!9;CL:0002420!1.26e-14!9;CL:0002419!1.26e-14!9;CL:0000790!1.26e-14!9;CL:0002031!1.29e-13!25;CL:0000624!1.19e-12!8;CL:0000738!3.53e-11!17;CL:0002087!3.53e-11!17;CL:0000988!7.45e-10!32;CL:0002032!7.45e-10!32;CL:0000037!7.45e-10!32;CL:0000566!7.45e-10!32;CL:0000837!7.45e-10!32;CL:0000893!7.91e-09!6;CL:0002489!7.91e-09!6;CL:0000898!7.91e-09!6;CL:0000809!7.91e-09!6;CL:0000810!7.91e-09!6;CL:0000895!7.91e-09!6;CL:0000808!7.91e-09!6;CL:0000894!7.91e-09!6;CL:0000806!7.91e-09!6;CL:0000807!7.91e-09!6;CL:0000805!7.91e-09!6;CL:0002425!7.91e-09!6;CL:0002436!7.91e-09!6;CL:0002427!7.91e-09!6;CL:0002428!7.91e-09!6;CL:0002429!7.91e-09!6;CL:0002433!7.91e-09!6;CL:0002431!7.91e-09!6;CL:0002432!7.91e-09!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.18e-30,11;CL:0000827,1.18e-30,11;CL:0000838,4.51e-28,12;CL:0000542,6.92e-26,13;CL:0000051,6.92e-26,13;CL:0000738,1.05e-19,17;CL:0002087,1.05e-19,17;CL:0000791,1.71e-19,9;CL:0000789,1.71e-19,9;CL:0002420,1.71e-19,9;CL:0002419,1.71e-19,9;CL:0000790,1.71e-19,9;CL:0000624,2.42e-14,8;CL:0002031,2.96e-13,25;CL:0000988,3.05e-10,32;CL:0002032,3.05e-10,32;CL:0000037,3.05e-10,32;CL:0000837,3.05e-10,32;CL:0000625,2.54e-08,1;CL:0000815,2.98e-08,1;CL:0000792,2.98e-08,1;CL:0002320,5.95e-07,46;CL:0000134,5.95e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003408!1.11e-29!24;UBERON:0004177!1.62e-28!29;UBERON:0002370!5.69e-28!23;UBERON:0000974!5.69e-28!23;UBERON:0004807!5.69e-28!23;UBERON:0005058!5.69e-28!23;UBERON:0003351!5.69e-28!23;UBERON:0009113!5.69e-28!23;UBERON:0003295!5.69e-28!23;UBERON:0009722!5.69e-28!23;UBERON:0005562!5.69e-28!23;UBERON:0007690!5.69e-28!23;UBERON:0006562!1.37e-26!24;UBERON:0001557!1.37e-26!24;UBERON:0001042!1.37e-26!24;UBERON:0008814!1.37e-26!24;UBERON:0009145!1.37e-26!24;UBERON:0002193!3.97e-26!48;UBERON:0002390!6.68e-24!45;UBERON:0003061!6.68e-24!45;UBERON:0000072!4.68e-23!27;UBERON:0000063!1.72e-18!35;UBERON:0002405!5.21e-17!70;UBERON:0001004!2.82e-16!42;UBERON:0005057!3.65e-15!51;UBERON:0000065!5.03e-15!41;UBERON:0003081!6.88e-12!88;UBERON:0003929!4.87e-11!55;UBERON:0002368!1.13e-09!60;UBERON:0002530!1.34e-09!65;UBERON:0000064!8.96e-09!99;UBERON:0005911!1.13e-08!69;UBERON:0000490!2.49e-08!66;UBERON:0001041!3.76e-08!92;UBERON:0001007!6.21e-08!128;UBERON:0001555!6.21e-08!128;UBERON:0007026!6.21e-08!128;UBERON:0004119!1.07e-07!130;UBERON:0000925!1.07e-07!130;UBERON:0006595!1.07e-07!130;UBERON:0004921!1.89e-07!126;UBERON:0004185!1.89e-07!126;UBERON:0000077!2.06e-07!97;UBERON:0000949!3.28e-07!72 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.02e-14,23;UBERON:0000974,7.02e-14,23;UBERON:0004807,7.02e-14,23;UBERON:0005058,7.02e-14,23;UBERON:0003351,7.02e-14,23;UBERON:0009113,7.02e-14,23;UBERON:0003295,7.02e-14,23;UBERON:0009722,7.02e-14,23;UBERON:0005562,7.02e-14,23;UBERON:0007690,7.02e-14,23;UBERON:0006562,2.77e-13,24;UBERON:0003408,2.77e-13,24;UBERON:0001557,2.77e-13,24;UBERON:0001042,2.77e-13,24;UBERON:0008814,2.77e-13,24;UBERON:0009145,2.77e-13,24;UBERON:0000072,9.36e-12,27;UBERON:0004177,6.54e-11,29;UBERON:0005057,6.54e-11,29;UBERON:0000077,5.94e-09,35;UBERON:0007811,1.09e-08,36;UBERON:0002193,2.79e-08,48;UBERON:0002405,2.79e-08,48;UBERON:0000029,6.57e-08,1;UBERON:0001097,6.57e-08,1;UBERON:0003968,6.57e-08,1;UBERON:0001467,6.57e-08,1;UBERON:0000065,1.46e-07,41;UBERON:0001004,2.27e-07,42;UBERON:0000153,3.47e-07,43;UBERON:0002384,5.95e-07,46;UBERON:0002390,7.68e-07,45;UBERON:0003061,7.68e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,4.39019299701359,0.985521055061667,0.70219357896598,0.34243593645101,0,7.53283211697305,6.20684857174882,0.333109761815663,0,0,0.473193248037357,0.548457734422955,0.84877930359606,0,3.97163804803541,5.22399578277871,0.319984845586813,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.62681071005672,4.7053131879945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,2.33044095282455,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0.136694227721025,0.686334519619568,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,1.41907650703115,3.08132871494482,2.46849563657811,0.716106782669926,1.78813219303138,0.120195449519969,0.443068581523732,0.706765149637033,0.457240839929999,0.604957110821043,0.584747284438515,1.25075394132428,0.467507608726276,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chrX:50113602..50113611,+ | |||
}} |
Latest revision as of 07:51, 6 August 2015
Short description: | p@chrX:50113602..50113611, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:50113602..50113611, + |
Coexpression cluster: | MCL_coexpression_mm9:1287 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.18e-30 | 11 |
pro-T cell | 1.18e-30 | 11 |
lymphoid lineage restricted progenitor cell | 4.51e-28 | 12 |
lymphocyte | 6.92e-26 | 13 |
common lymphoid progenitor | 6.92e-26 | 13 |
leukocyte | 1.05e-19 | 17 |
nongranular leukocyte | 1.05e-19 | 17 |
mature alpha-beta T cell | 1.71e-19 | 9 |
alpha-beta T cell | 1.71e-19 | 9 |
immature T cell | 1.71e-19 | 9 |
mature T cell | 1.71e-19 | 9 |
immature alpha-beta T cell | 1.71e-19 | 9 |
CD4-positive, alpha-beta T cell | 2.42e-14 | 8 |
hematopoietic lineage restricted progenitor cell | 2.96e-13 | 25 |
hematopoietic cell | 3.05e-10 | 32 |
hematopoietic oligopotent progenitor cell | 3.05e-10 | 32 |
hematopoietic stem cell | 3.05e-10 | 32 |
hematopoietic multipotent progenitor cell | 3.05e-10 | 32 |
CD8-positive, alpha-beta T cell | 2.54e-08 | 1 |
regulatory T cell | 2.98e-08 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.98e-08 | 1 |
connective tissue cell | 5.95e-07 | 46 |
mesenchymal cell | 5.95e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
thymus | 7.02e-14 | 23 |
neck | 7.02e-14 | 23 |
respiratory system epithelium | 7.02e-14 | 23 |
hemolymphoid system gland | 7.02e-14 | 23 |
pharyngeal epithelium | 7.02e-14 | 23 |
thymic region | 7.02e-14 | 23 |
pharyngeal gland | 7.02e-14 | 23 |
entire pharyngeal arch endoderm | 7.02e-14 | 23 |
thymus primordium | 7.02e-14 | 23 |
early pharyngeal endoderm | 7.02e-14 | 23 |
pharynx | 2.77e-13 | 24 |
gland of gut | 2.77e-13 | 24 |
upper respiratory tract | 2.77e-13 | 24 |
chordate pharynx | 2.77e-13 | 24 |
pharyngeal arch system | 2.77e-13 | 24 |
pharyngeal region of foregut | 2.77e-13 | 24 |
segment of respiratory tract | 9.36e-12 | 27 |
hemopoietic organ | 6.54e-11 | 29 |
immune organ | 6.54e-11 | 29 |
mixed endoderm/mesoderm-derived structure | 5.94e-09 | 35 |
craniocervical region | 1.09e-08 | 36 |
hemolymphoid system | 2.79e-08 | 48 |
immune system | 2.79e-08 | 48 |
lymph node | 6.57e-08 | 1 |
axillary lymph node | 6.57e-08 | 1 |
peripheral lymph node | 6.57e-08 | 1 |
shoulder | 6.57e-08 | 1 |
respiratory tract | 1.46e-07 | 41 |
respiratory system | 2.27e-07 | 42 |
anterior region of body | 3.47e-07 | 43 |
connective tissue | 5.95e-07 | 46 |
hematopoietic system | 7.68e-07 | 45 |
blood island | 7.68e-07 | 45 |