FFCP PHASE2:Hg19::chr5:175963631..175963657,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:22838 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:19180 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=22838 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=19180 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
Latest revision as of 04:26, 17 September 2015
| Short description: | p4@RNF44 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_RNF44_5end |
| Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
| Association with transcript: | -300bp_to_ENST00000509404_5end |
| EntrezGene: | RNF44 |
| HGNC: | 19180 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p4@RNF44 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic cell | 1.47e-38 | 177 |
| hematopoietic stem cell | 2.41e-38 | 168 |
| hematopoietic oligopotent progenitor cell | 2.48e-34 | 161 |
| hematopoietic multipotent progenitor cell | 2.48e-34 | 161 |
| lymphocyte | 3.87e-30 | 53 |
| common lymphoid progenitor | 3.87e-30 | 53 |
| lymphoid lineage restricted progenitor cell | 6.02e-30 | 52 |
| leukocyte | 1.29e-28 | 136 |
| nongranular leukocyte | 5.68e-25 | 115 |
| hematopoietic lineage restricted progenitor cell | 1.77e-21 | 120 |
Showing 1 to 10 of 23 entries
| Ontology term | p-value | n |
|---|---|---|
| hemolymphoid system | 4.50e-08 | 108 |
| blood | 5.34e-08 | 15 |
| haemolymphatic fluid | 5.34e-08 | 15 |
| organism substance | 5.34e-08 | 15 |
| hematopoietic system | 1.19e-07 | 98 |
| blood island | 1.19e-07 | 98 |
Showing 1 to 6 of 6 entries
| Ontology term | p-value | n |
|---|---|---|
| hematologic cancer | 1.45e-16 | 51 |
| immune system cancer | 1.45e-16 | 51 |
| leukemia | 1.23e-13 | 39 |
| myeloid leukemia | 1.94e-10 | 31 |
Showing 1 to 4 of 4 entries
